EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017156 (Gene tree)
Gene ID: 102346452
Gene Symbol: PAN3
Alias: -
Full Name: poly(A) specific ribonuclease subunit PAN3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 139038 bases
Position: chrJH126705.1:1937951-2076988
Accession: 102346452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019509	zf-CCCH	PF00642.24	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019647	PAN3-201	2785	XM_005992958	ENSLACP00000019509	841 (aa)	-	H3BC88

Gene Model

Click here to download ENSLACG00000017156's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017156	PAN3	99	67.940	ENSELUG00000014375	pan3	99	66.512	Esox_lucius
ENSLACG00000017156	PAN3	100	71.744	ENSKMAG00000008813	pan3	100	70.210	Kryptolebias_marmoratus
ENSLACG00000017156	PAN3	100	70.746	ENSORLG00000008758	pan3	100	69.321	Oryzias_latipes
ENSLACG00000017156	PAN3	100	68.384	ENSORLG00015014393	pan3	99	79.104	Oryzias_latipes_hsok
ENSLACG00000017156	PAN3	90	77.492	ENSOMEG00000007798	pan3	100	77.492	Oryzias_melastigma
ENSLACG00000017156	PAN3	76	62.906	ENSPKIG00000008329	-	96	71.144	Paramormyrops_kingsleyae
ENSLACG00000017156	PAN3	97	60.964	ENSPMAG00000002383	pan3	100	60.723	Petromyzon_marinus
ENSLACG00000017156	PAN3	100	70.956	ENSPREG00000019582	pan3	99	80.431	Poecilia_reticulata
ENSLACG00000017156	PAN3	100	71.893	ENSSMAG00000014517	pan3	98	70.478	Scophthalmus_maximus
ENSLACG00000017156	PAN3	91	86.942	ENSXETG00000011794	pan3	100	74.323	Xenopus_tropicalis