EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017176 (Gene tree)
Gene ID: 102354562
Gene Symbol: SNRNP35
Alias: U1SNRNPBP
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 35
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 840 bases
Position: chrJH126594.1:1947694-1948533
Accession: 102354562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019533	RRM_1	PF00076.22	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019671	SNRNP35-201	840	XM_005988941	ENSLACP00000019533	279 (aa)	XP_005989003	H3BCB2

Gene Model

Click here to download ENSLACG00000017176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017176	SNRNP35	86	73.770	ENSG00000184209	SNRNP35	82	82.178	Homo_sapiens
ENSLACG00000017176	SNRNP35	87	73.984	ENSAMEG00000019650	SNRNP35	99	73.984	Ailuropoda_melanoleuca
ENSLACG00000017176	SNRNP35	80	68.468	ENSACIG00000003238	snrnp35	79	85.119	Amphilophus_citrinellus
ENSLACG00000017176	SNRNP35	60	83.333	ENSAOCG00000007701	snrnp35	79	83.333	Amphiprion_ocellaris
ENSLACG00000017176	SNRNP35	60	83.333	ENSAPEG00000023725	snrnp35	79	83.333	Amphiprion_percula
ENSLACG00000017176	SNRNP35	60	82.143	ENSATEG00000021269	snrnp35	96	72.772	Anabas_testudineus
ENSLACG00000017176	SNRNP35	80	79.372	ENSAPLG00000015654	SNRNP35	81	83.085	Anas_platyrhynchos
ENSLACG00000017176	SNRNP35	78	76.818	ENSACAG00000015421	SNRNP35	99	70.260	Anolis_carolinensis
ENSLACG00000017176	SNRNP35	86	73.061	ENSANAG00000025109	SNRNP35	80	80.788	Aotus_nancymaae
ENSLACG00000017176	SNRNP35	60	85.714	ENSACLG00000020994	SNRNP35	89	77.949	Astatotilapia_calliptera
ENSLACG00000017176	SNRNP35	60	85.714	ENSACLG00000020890	snrnp35	89	77.949	Astatotilapia_calliptera
ENSLACG00000017176	SNRNP35	60	80.357	ENSAMXG00000026163	snrnp35	80	80.357	Astyanax_mexicanus
ENSLACG00000017176	SNRNP35	87	73.577	ENSBTAG00000008060	SNRNP35	100	72.653	Bos_taurus
ENSLACG00000017176	SNRNP35	86	73.770	ENSCJAG00000007131	SNRNP35	80	81.683	Callithrix_jacchus
ENSLACG00000017176	SNRNP35	87	74.390	ENSCAFG00000007484	SNRNP35	100	74.390	Canis_familiaris
ENSLACG00000017176	SNRNP35	87	74.390	ENSCAFG00020015272	-	100	74.390	Canis_lupus_dingo
ENSLACG00000017176	SNRNP35	87	73.577	ENSCHIG00000006364	SNRNP35	100	72.653	Capra_hircus
ENSLACG00000017176	SNRNP35	78	76.712	ENSTSYG00000034104	SNRNP35	99	72.764	Carlito_syrichta
ENSLACG00000017176	SNRNP35	87	72.764	ENSCPOG00000002548	SNRNP35	82	82.178	Cavia_porcellus
ENSLACG00000017176	SNRNP35	86	73.061	ENSCCAG00000001685	SNRNP35	81	80.788	Cebus_capucinus
ENSLACG00000017176	SNRNP35	86	73.361	ENSCATG00000021946	SNRNP35	82	82.178	Cercocebus_atys
ENSLACG00000017176	SNRNP35	77	76.959	ENSCLAG00000010232	SNRNP35	100	72.358	Chinchilla_lanigera
ENSLACG00000017176	SNRNP35	86	72.951	ENSCSAG00000018950	SNRNP35	82	82.178	Chlorocebus_sabaeus
ENSLACG00000017176	SNRNP35	87	74.797	ENSCHOG00000006263	SNRNP35	99	75.203	Choloepus_hoffmanni
ENSLACG00000017176	SNRNP35	84	74.793	ENSCPBG00000025965	SNRNP35	99	70.000	Chrysemys_picta_bellii
ENSLACG00000017176	SNRNP35	62	56.395	ENSCSAVG00000000748	-	96	56.395	Ciona_savignyi
ENSLACG00000017176	SNRNP35	86	72.541	ENSCANG00000025364	SNRNP35	80	81.683	Colobus_angolensis_palliatus
ENSLACG00000017176	SNRNP35	77	76.959	ENSCGRG00001012630	Snrnp35	100	71.774	Cricetulus_griseus_chok1gshd
ENSLACG00000017176	SNRNP35	77	76.959	ENSCGRG00000002063	Snrnp35	100	71.774	Cricetulus_griseus_crigri
ENSLACG00000017176	SNRNP35	59	78.313	ENSDARG00000099913	snrnp35	80	78.313	Danio_rerio
ENSLACG00000017176	SNRNP35	87	75.203	ENSDNOG00000038603	SNRNP35	100	75.610	Dasypus_novemcinctus
ENSLACG00000017176	SNRNP35	87	73.984	ENSDORG00000001859	Snrnp35	100	73.577	Dipodomys_ordii
ENSLACG00000017176	SNRNP35	96	46.067	ENSEBUG00000003535	snrnp35	98	46.763	Eptatretus_burgeri
ENSLACG00000017176	SNRNP35	86	74.590	ENSEASG00005012617	SNRNP35	99	74.590	Equus_asinus_asinus
ENSLACG00000017176	SNRNP35	86	74.590	ENSECAG00000006080	SNRNP35	99	74.590	Equus_caballus
ENSLACG00000017176	SNRNP35	64	88.202	ENSEEUG00000011544	SNRNP35	80	83.249	Erinaceus_europaeus
ENSLACG00000017176	SNRNP35	72	73.039	ENSELUG00000000071	snrnp35	85	73.039	Esox_lucius
ENSLACG00000017176	SNRNP35	87	73.171	ENSFCAG00000001159	SNRNP35	98	74.390	Felis_catus
ENSLACG00000017176	SNRNP35	87	76.543	ENSFALG00000014650	SNRNP35	100	76.543	Ficedula_albicollis
ENSLACG00000017176	SNRNP35	77	68.837	ENSFDAG00000018743	SNRNP35	100	63.821	Fukomys_damarensis
ENSLACG00000017176	SNRNP35	93	61.776	ENSGMOG00000002299	snrnp35	100	59.770	Gadus_morhua
ENSLACG00000017176	SNRNP35	84	77.350	ENSGALG00000003318	SNRNP35	99	73.783	Gallus_gallus
ENSLACG00000017176	SNRNP35	60	82.738	ENSGACG00000020631	snrnp35	98	60.595	Gasterosteus_aculeatus
ENSLACG00000017176	SNRNP35	86	73.770	ENSGGOG00000015936	SNRNP35	80	82.178	Gorilla_gorilla
ENSLACG00000017176	SNRNP35	60	85.714	ENSHBUG00000015853	snrnp35	88	77.949	Haplochromis_burtoni
ENSLACG00000017176	SNRNP35	87	72.764	ENSHGLG00000017961	SNRNP35	82	82.673	Heterocephalus_glaber_female
ENSLACG00000017176	SNRNP35	87	72.764	ENSHGLG00100019252	SNRNP35	82	82.673	Heterocephalus_glaber_male
ENSLACG00000017176	SNRNP35	95	59.328	ENSIPUG00000016053	snrnp35	95	57.401	Ictalurus_punctatus
ENSLACG00000017176	SNRNP35	87	71.311	ENSSTOG00000025145	SNRNP35	100	71.311	Ictidomys_tridecemlineatus
ENSLACG00000017176	SNRNP35	88	72.581	ENSJJAG00000013421	Snrnp35	98	72.177	Jaculus_jaculus
ENSLACG00000017176	SNRNP35	98	62.816	ENSLOCG00000018154	snrnp35	99	64.748	Lepisosteus_oculatus
ENSLACG00000017176	SNRNP35	87	73.984	ENSLAFG00000022302	SNRNP35	100	74.390	Loxodonta_africana
ENSLACG00000017176	SNRNP35	86	72.951	ENSMFAG00000008986	SNRNP35	82	82.178	Macaca_fascicularis
ENSLACG00000017176	SNRNP35	86	72.951	ENSMMUG00000008411	SNRNP35	82	82.178	Macaca_mulatta
ENSLACG00000017176	SNRNP35	86	72.951	ENSMNEG00000018139	SNRNP35	82	82.178	Macaca_nemestrina
ENSLACG00000017176	SNRNP35	86	73.361	ENSMLEG00000040998	SNRNP35	80	82.178	Mandrillus_leucophaeus
ENSLACG00000017176	SNRNP35	60	83.333	ENSMAMG00000018927	snrnp35	71	83.333	Mastacembelus_armatus
ENSLACG00000017176	SNRNP35	58	78.528	ENSMZEG00005018947	-	78	78.049	Maylandia_zebra
ENSLACG00000017176	SNRNP35	60	85.714	ENSMZEG00005018928	snrnp35	89	77.949	Maylandia_zebra
ENSLACG00000017176	SNRNP35	87	76.955	ENSMGAG00000003241	SNRNP35	100	76.955	Meleagris_gallopavo
ENSLACG00000017176	SNRNP35	77	77.880	ENSMAUG00000001690	Snrnp35	82	81.188	Mesocricetus_auratus
ENSLACG00000017176	SNRNP35	87	72.764	ENSMICG00000026512	SNRNP35	80	81.683	Microcebus_murinus
ENSLACG00000017176	SNRNP35	77	78.341	ENSMOCG00000000548	Snrnp35	82	81.683	Microtus_ochrogaster
ENSLACG00000017176	SNRNP35	60	83.333	ENSMMOG00000018779	snrnp35	99	63.077	Mola_mola
ENSLACG00000017176	SNRNP35	64	84.831	ENSMODG00000012481	SNRNP35	99	84.831	Monodelphis_domestica
ENSLACG00000017176	SNRNP35	87	72.131	MGP_CAROLIEiJ_G0027752	Snrnp35	100	85.950	Mus_caroli
ENSLACG00000017176	SNRNP35	87	72.131	ENSMUSG00000029402	Snrnp35	100	85.950	Mus_musculus
ENSLACG00000017176	SNRNP35	77	77.315	MGP_PahariEiJ_G0024332	Snrnp35	100	85.950	Mus_pahari
ENSLACG00000017176	SNRNP35	87	72.131	MGP_SPRETEiJ_G0028751	Snrnp35	100	85.950	Mus_spretus
ENSLACG00000017176	SNRNP35	77	80.000	ENSMPUG00000019392	SNRNP35	100	73.577	Mustela_putorius_furo
ENSLACG00000017176	SNRNP35	87	71.138	ENSMLUG00000025311	SNRNP35	100	72.358	Myotis_lucifugus
ENSLACG00000017176	SNRNP35	86	72.764	ENSNGAG00000010711	Snrnp35	99	72.764	Nannospalax_galili
ENSLACG00000017176	SNRNP35	86	73.770	ENSNLEG00000029859	SNRNP35	80	82.178	Nomascus_leucogenys
ENSLACG00000017176	SNRNP35	87	71.429	ENSOPRG00000011119	SNRNP35	82	81.095	Ochotona_princeps
ENSLACG00000017176	SNRNP35	87	73.171	ENSODEG00000019870	SNRNP35	100	73.171	Octodon_degus
ENSLACG00000017176	SNRNP35	60	85.714	ENSONIG00000021361	snrnp35	80	77.949	Oreochromis_niloticus
ENSLACG00000017176	SNRNP35	85	72.840	ENSOANG00000002697	SNRNP35	86	79.327	Ornithorhynchus_anatinus
ENSLACG00000017176	SNRNP35	87	72.358	ENSOCUG00000021248	SNRNP35	100	72.358	Oryctolagus_cuniculus
ENSLACG00000017176	SNRNP35	73	75.490	ENSORLG00000005673	snrnp35	91	76.238	Oryzias_latipes
ENSLACG00000017176	SNRNP35	73	75.122	ENSORLG00015014439	snrnp35	94	76.617	Oryzias_latipes_hsok
ENSLACG00000017176	SNRNP35	87	74.390	ENSOGAG00000011301	SNRNP35	82	82.673	Otolemur_garnettii
ENSLACG00000017176	SNRNP35	87	73.577	ENSOARG00000004583	SNRNP35	100	72.653	Ovis_aries
ENSLACG00000017176	SNRNP35	86	73.770	ENSPPAG00000000480	SNRNP35	80	82.178	Pan_paniscus
ENSLACG00000017176	SNRNP35	87	73.171	ENSPPRG00000013139	SNRNP35	98	74.390	Panthera_pardus
ENSLACG00000017176	SNRNP35	87	73.171	ENSPTIG00000015832	SNRNP35	98	74.390	Panthera_tigris_altaica
ENSLACG00000017176	SNRNP35	86	73.770	ENSPTRG00000023573	SNRNP35	80	82.178	Pan_troglodytes
ENSLACG00000017176	SNRNP35	86	73.361	ENSPANG00000019739	SNRNP35	80	82.178	Papio_anubis
ENSLACG00000017176	SNRNP35	61	81.065	ENSPKIG00000005221	snrnp35	81	81.065	Paramormyrops_kingsleyae
ENSLACG00000017176	SNRNP35	96	71.852	ENSPSIG00000000450	SNRNP35	99	71.852	Pelodiscus_sinensis
ENSLACG00000017176	SNRNP35	79	76.364	ENSPCIG00000010978	SNRNP35	99	71.269	Phascolarctos_cinereus
ENSLACG00000017176	SNRNP35	60	84.524	ENSPFOG00000019881	snrnp35	98	70.455	Poecilia_formosa
ENSLACG00000017176	SNRNP35	86	73.770	ENSPPYG00000005088	SNRNP35	80	82.178	Pongo_abelii
ENSLACG00000017176	SNRNP35	77	79.070	ENSPCAG00000011478	SNRNP35	99	72.951	Procavia_capensis
ENSLACG00000017176	SNRNP35	87	73.577	ENSPCOG00000009946	SNRNP35	82	82.178	Propithecus_coquereli
ENSLACG00000017176	SNRNP35	87	74.797	ENSPVAG00000015317	SNRNP35	99	74.797	Pteropus_vampyrus
ENSLACG00000017176	SNRNP35	95	62.687	ENSPNAG00000020589	snrnp35	96	60.741	Pygocentrus_nattereri
ENSLACG00000017176	SNRNP35	87	72.131	ENSRNOG00000001060	Snrnp35	100	72.541	Rattus_norvegicus
ENSLACG00000017176	SNRNP35	86	72.951	ENSRBIG00000043111	SNRNP35	80	82.178	Rhinopithecus_bieti
ENSLACG00000017176	SNRNP35	86	72.951	ENSRROG00000032878	SNRNP35	80	82.178	Rhinopithecus_roxellana
ENSLACG00000017176	SNRNP35	86	73.061	ENSSBOG00000012231	SNRNP35	81	80.788	Saimiri_boliviensis_boliviensis
ENSLACG00000017176	SNRNP35	81	72.247	ENSSHAG00000001216	-	100	71.020	Sarcophilus_harrisii
ENSLACG00000017176	SNRNP35	79	75.909	ENSSHAG00000015558	-	100	73.061	Sarcophilus_harrisii
ENSLACG00000017176	SNRNP35	61	81.287	ENSSFOG00015003785	snrnp35	91	81.287	Scleropages_formosus
ENSLACG00000017176	SNRNP35	60	82.738	ENSSLDG00000017209	snrnp35	89	74.112	Seriola_lalandi_dorsalis
ENSLACG00000017176	SNRNP35	62	86.782	ENSSARG00000012656	SNRNP35	83	79.602	Sorex_araneus
ENSLACG00000017176	SNRNP35	77	76.168	ENSSPUG00000012768	SNRNP35	99	69.455	Sphenodon_punctatus
ENSLACG00000017176	SNRNP35	80	69.507	ENSSPAG00000008207	snrnp35	88	75.127	Stegastes_partitus
ENSLACG00000017176	SNRNP35	87	73.984	ENSSSCG00000022212	SNRNP35	93	82.090	Sus_scrofa
ENSLACG00000017176	SNRNP35	86	77.178	ENSTGUG00000005364	-	100	77.178	Taeniopygia_guttata
ENSLACG00000017176	SNRNP35	84	76.496	ENSTGUG00000015471	-	99	72.659	Taeniopygia_guttata
ENSLACG00000017176	SNRNP35	85	64.286	ENSTNIG00000009984	snrnp35	80	83.929	Tetraodon_nigroviridis
ENSLACG00000017176	SNRNP35	87	72.358	ENSTBEG00000002309	SNRNP35	99	72.358	Tupaia_belangeri
ENSLACG00000017176	SNRNP35	87	74.390	ENSUAMG00000012611	SNRNP35	100	74.390	Ursus_americanus
ENSLACG00000017176	SNRNP35	87	74.390	ENSUMAG00000003914	SNRNP35	97	74.390	Ursus_maritimus
ENSLACG00000017176	SNRNP35	87	74.390	ENSVVUG00000027761	-	100	74.390	Vulpes_vulpes
ENSLACG00000017176	SNRNP35	60	84.524	ENSXMAG00000019885	snrnp35	67	84.524	Xiphophorus_maculatus