EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017253 (Gene tree)
Gene ID: 102345288
Gene Symbol: POLR2D
Alias: RBP4
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 6379 bases
Position: chrJH126651.1:1989067-1995445
Accession: 102345288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019619	RNA_pol_Rpb4	PF03874.16	1.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019757	POLR2D-201	2772	XM_005991190	ENSLACP00000019619	142 (aa)	XP_005991252	H3BCJ8

Gene Model

Click here to download ENSLACG00000017253's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017253	POLR2D	100	96.479	ENSG00000144231	POLR2D	100	98.077	Homo_sapiens
ENSLACG00000017253	POLR2D	100	93.056	ENSAPOG00000023553	polr2d	100	93.056	Acanthochromis_polyacanthus
ENSLACG00000017253	POLR2D	100	95.139	ENSAMEG00000011746	POLR2D	100	95.139	Ailuropoda_melanoleuca
ENSLACG00000017253	POLR2D	100	93.056	ENSAOCG00000007295	polr2d	100	93.056	Amphiprion_ocellaris
ENSLACG00000017253	POLR2D	100	93.056	ENSAPEG00000018714	polr2d	100	93.056	Amphiprion_percula
ENSLACG00000017253	POLR2D	100	93.056	ENSATEG00000020416	polr2d	100	93.056	Anabas_testudineus
ENSLACG00000017253	POLR2D	100	95.070	ENSACAG00000005255	POLR2D	100	95.070	Anolis_carolinensis
ENSLACG00000017253	POLR2D	100	96.479	ENSANAG00000019959	POLR2D	100	96.479	Aotus_nancymaae
ENSLACG00000017253	POLR2D	100	93.056	ENSACLG00000009919	polr2d	100	71.528	Astatotilapia_calliptera
ENSLACG00000017253	POLR2D	94	97.744	ENSAMXG00000008954	polr2d	100	93.706	Astyanax_mexicanus
ENSLACG00000017253	POLR2D	100	96.479	ENSBTAG00000053244	POLR2D	100	96.479	Bos_taurus
ENSLACG00000017253	POLR2D	99	57.639	WBGene00018391	rpb-4	100	57.639	Caenorhabditis_elegans
ENSLACG00000017253	POLR2D	100	95.775	ENSCJAG00000021814	-	100	95.775	Callithrix_jacchus
ENSLACG00000017253	POLR2D	100	96.479	ENSCJAG00000042216	-	100	96.479	Callithrix_jacchus
ENSLACG00000017253	POLR2D	100	96.479	ENSCAFG00000004311	POLR2D	100	96.479	Canis_familiaris
ENSLACG00000017253	POLR2D	100	96.479	ENSCAFG00020003617	POLR2D	100	96.479	Canis_lupus_dingo
ENSLACG00000017253	POLR2D	100	95.775	ENSCHIG00000025995	POLR2D	100	95.775	Capra_hircus
ENSLACG00000017253	POLR2D	82	96.581	ENSTSYG00000036021	POLR2D	100	96.581	Carlito_syrichta
ENSLACG00000017253	POLR2D	100	95.070	ENSCPOG00000002571	POLR2D	100	95.070	Cavia_porcellus
ENSLACG00000017253	POLR2D	100	96.479	ENSCCAG00000037709	POLR2D	100	96.479	Cebus_capucinus
ENSLACG00000017253	POLR2D	100	95.775	ENSCATG00000036749	POLR2D	100	95.775	Cercocebus_atys
ENSLACG00000017253	POLR2D	100	95.775	ENSCLAG00000004449	POLR2D	100	95.775	Chinchilla_lanigera
ENSLACG00000017253	POLR2D	100	95.775	ENSCSAG00000016861	POLR2D	100	95.775	Chlorocebus_sabaeus
ENSLACG00000017253	POLR2D	82	97.436	ENSCHOG00000013850	POLR2D	100	97.436	Choloepus_hoffmanni
ENSLACG00000017253	POLR2D	100	96.479	ENSCPBG00000019132	POLR2D	51	96.479	Chrysemys_picta_bellii
ENSLACG00000017253	POLR2D	90	88.281	ENSCING00000011474	-	96	88.281	Ciona_intestinalis
ENSLACG00000017253	POLR2D	94	85.821	ENSCSAVG00000008353	-	92	85.821	Ciona_savignyi
ENSLACG00000017253	POLR2D	100	96.479	ENSCANG00000043665	POLR2D	100	96.479	Colobus_angolensis_palliatus
ENSLACG00000017253	POLR2D	100	96.479	ENSCGRG00001013608	Polr2d	100	96.479	Cricetulus_griseus_chok1gshd
ENSLACG00000017253	POLR2D	82	97.436	ENSCGRG00000012624	Polr2d	100	97.436	Cricetulus_griseus_crigri
ENSLACG00000017253	POLR2D	100	92.361	ENSCSEG00000006147	polr2d	100	92.361	Cynoglossus_semilaevis
ENSLACG00000017253	POLR2D	100	92.361	ENSCVAG00000000779	polr2d	100	92.361	Cyprinodon_variegatus
ENSLACG00000017253	POLR2D	100	95.070	ENSDARG00000076509	polr2d	100	95.070	Danio_rerio
ENSLACG00000017253	POLR2D	100	95.775	ENSDNOG00000008527	POLR2D	100	95.775	Dasypus_novemcinctus
ENSLACG00000017253	POLR2D	100	95.775	ENSDORG00000026897	Polr2d	100	95.775	Dipodomys_ordii
ENSLACG00000017253	POLR2D	94	78.195	FBgn0263757	Rpb4	96	78.195	Drosophila_melanogaster
ENSLACG00000017253	POLR2D	100	93.662	ENSEBUG00000007675	polr2d	100	93.662	Eptatretus_burgeri
ENSLACG00000017253	POLR2D	100	96.479	ENSEASG00005007103	POLR2D	100	96.479	Equus_asinus_asinus
ENSLACG00000017253	POLR2D	100	96.479	ENSECAG00000000556	POLR2D	100	96.479	Equus_caballus
ENSLACG00000017253	POLR2D	99	94.326	ENSELUG00000005928	polr2d	99	94.326	Esox_lucius
ENSLACG00000017253	POLR2D	100	96.479	ENSFCAG00000027816	POLR2D	100	96.479	Felis_catus
ENSLACG00000017253	POLR2D	100	95.775	ENSFALG00000003528	POLR2D	100	95.775	Ficedula_albicollis
ENSLACG00000017253	POLR2D	100	95.070	ENSFDAG00000007217	POLR2D	100	95.070	Fukomys_damarensis
ENSLACG00000017253	POLR2D	100	95.105	ENSGMOG00000001823	polr2d	99	95.105	Gadus_morhua
ENSLACG00000017253	POLR2D	100	95.775	ENSGALG00000002057	POLR2D	100	95.775	Gallus_gallus
ENSLACG00000017253	POLR2D	100	93.056	ENSGAFG00000016932	polr2d	71	93.056	Gambusia_affinis
ENSLACG00000017253	POLR2D	100	92.361	ENSGACG00000004639	polr2d	100	92.361	Gasterosteus_aculeatus
ENSLACG00000017253	POLR2D	100	95.775	ENSGAGG00000021308	POLR2D	100	95.775	Gopherus_agassizii
ENSLACG00000017253	POLR2D	100	96.479	ENSGGOG00000004723	POLR2D	100	96.479	Gorilla_gorilla
ENSLACG00000017253	POLR2D	100	95.775	ENSHGLG00000016570	Polr2d	100	95.775	Heterocephalus_glaber_female
ENSLACG00000017253	POLR2D	100	95.775	ENSHGLG00100013785	Polr2d	100	95.775	Heterocephalus_glaber_male
ENSLACG00000017253	POLR2D	100	90.845	ENSHCOG00000006425	polr2d	100	90.845	Hippocampus_comes
ENSLACG00000017253	POLR2D	100	94.366	ENSIPUG00000011192	polr2d	100	94.366	Ictalurus_punctatus
ENSLACG00000017253	POLR2D	100	94.366	ENSSTOG00000023329	POLR2D	100	94.366	Ictidomys_tridecemlineatus
ENSLACG00000017253	POLR2D	82	91.453	ENSJJAG00000005723	-	94	91.453	Jaculus_jaculus
ENSLACG00000017253	POLR2D	100	86.620	ENSJJAG00000000783	-	100	86.620	Jaculus_jaculus
ENSLACG00000017253	POLR2D	100	95.775	ENSJJAG00000015053	-	100	95.775	Jaculus_jaculus
ENSLACG00000017253	POLR2D	85	92.562	ENSKMAG00000010677	polr2d	68	92.562	Kryptolebias_marmoratus
ENSLACG00000017253	POLR2D	100	93.750	ENSLOCG00000009106	polr2d	100	93.750	Lepisosteus_oculatus
ENSLACG00000017253	POLR2D	100	96.479	ENSLAFG00000001848	POLR2D	100	96.479	Loxodonta_africana
ENSLACG00000017253	POLR2D	100	95.775	ENSMFAG00000031937	POLR2D	100	95.775	Macaca_fascicularis
ENSLACG00000017253	POLR2D	100	95.775	ENSMMUG00000001989	POLR2D	100	95.775	Macaca_mulatta
ENSLACG00000017253	POLR2D	100	95.775	ENSMNEG00000035505	POLR2D	100	95.775	Macaca_nemestrina
ENSLACG00000017253	POLR2D	100	95.775	ENSMLEG00000035827	POLR2D	100	95.775	Mandrillus_leucophaeus
ENSLACG00000017253	POLR2D	100	95.775	ENSMGAG00000001248	POLR2D	100	95.775	Meleagris_gallopavo
ENSLACG00000017253	POLR2D	100	95.775	ENSMAUG00000014518	Polr2d	100	95.775	Mesocricetus_auratus
ENSLACG00000017253	POLR2D	100	95.775	ENSMICG00000009931	POLR2D	100	95.775	Microcebus_murinus
ENSLACG00000017253	POLR2D	100	93.662	ENSMOCG00000019367	Polr2d	100	93.662	Microtus_ochrogaster
ENSLACG00000017253	POLR2D	100	80.282	ENSMODG00000025030	-	100	80.282	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	79.577	ENSMODG00000025031	-	100	79.577	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	78.873	ENSMODG00000025032	-	100	78.873	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	79.577	ENSMODG00000025033	-	100	79.577	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	79.577	ENSMODG00000025034	-	100	79.577	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	79.577	ENSMODG00000025035	-	100	79.577	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	79.577	ENSMODG00000025036	-	100	79.577	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	96.479	ENSMODG00000018653	-	100	96.479	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	79.577	ENSMODG00000025029	-	100	79.577	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	80.282	ENSMODG00000025028	-	100	80.282	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	80.282	ENSMODG00000025027	-	100	80.282	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	80.282	ENSMODG00000025026	-	100	80.282	Monodelphis_domestica
ENSLACG00000017253	POLR2D	100	93.750	ENSMALG00000018266	polr2d	100	93.750	Monopterus_albus
ENSLACG00000017253	POLR2D	100	96.479	MGP_CAROLIEiJ_G0022066	Polr2d	100	96.479	Mus_caroli
ENSLACG00000017253	POLR2D	100	96.479	ENSMUSG00000024258	Polr2d	100	96.479	Mus_musculus
ENSLACG00000017253	POLR2D	100	96.479	MGP_PahariEiJ_G0018800	Polr2d	100	96.479	Mus_pahari
ENSLACG00000017253	POLR2D	100	96.479	MGP_SPRETEiJ_G0022977	Polr2d	100	96.479	Mus_spretus
ENSLACG00000017253	POLR2D	100	96.479	ENSMPUG00000016685	POLR2D	100	96.479	Mustela_putorius_furo
ENSLACG00000017253	POLR2D	83	97.458	ENSMLUG00000006862	POLR2D	100	97.458	Myotis_lucifugus
ENSLACG00000017253	POLR2D	100	96.479	ENSNGAG00000014862	Polr2d	100	96.479	Nannospalax_galili
ENSLACG00000017253	POLR2D	100	96.479	ENSNLEG00000027191	POLR2D	100	96.479	Nomascus_leucogenys
ENSLACG00000017253	POLR2D	82	96.581	ENSOPRG00000005327	POLR2D	100	96.581	Ochotona_princeps
ENSLACG00000017253	POLR2D	100	95.775	ENSODEG00000005262	POLR2D	100	95.775	Octodon_degus
ENSLACG00000017253	POLR2D	100	93.750	ENSONIG00000017290	polr2d	100	93.750	Oreochromis_niloticus
ENSLACG00000017253	POLR2D	83	98.305	ENSOANG00000013216	POLR2D	100	98.305	Ornithorhynchus_anatinus
ENSLACG00000017253	POLR2D	100	93.662	ENSOCUG00000023403	-	100	93.662	Oryctolagus_cuniculus
ENSLACG00000017253	POLR2D	100	88.811	ENSOCUG00000021449	-	100	88.811	Oryctolagus_cuniculus
ENSLACG00000017253	POLR2D	100	90.972	ENSORLG00000005266	polr2d	100	90.972	Oryzias_latipes
ENSLACG00000017253	POLR2D	100	90.972	ENSORLG00020006647	polr2d	100	90.972	Oryzias_latipes_hni
ENSLACG00000017253	POLR2D	100	90.972	ENSORLG00015003222	polr2d	100	90.972	Oryzias_latipes_hsok
ENSLACG00000017253	POLR2D	100	91.667	ENSOMEG00000018915	polr2d	100	91.667	Oryzias_melastigma
ENSLACG00000017253	POLR2D	100	94.444	ENSOGAG00000017118	POLR2D	100	94.444	Otolemur_garnettii
ENSLACG00000017253	POLR2D	100	95.775	ENSOARG00000015995	POLR2D	100	95.775	Ovis_aries
ENSLACG00000017253	POLR2D	100	96.479	ENSPPRG00000020222	POLR2D	100	96.479	Panthera_pardus
ENSLACG00000017253	POLR2D	100	96.479	ENSPTIG00000018618	POLR2D	100	96.479	Panthera_tigris_altaica
ENSLACG00000017253	POLR2D	100	96.479	ENSPTRG00000012436	POLR2D	100	96.479	Pan_troglodytes
ENSLACG00000017253	POLR2D	100	95.775	ENSPANG00000018602	POLR2D	100	95.775	Papio_anubis
ENSLACG00000017253	POLR2D	100	93.750	ENSPKIG00000012166	polr2d	100	93.750	Paramormyrops_kingsleyae
ENSLACG00000017253	POLR2D	83	98.305	ENSPSIG00000002873	POLR2D	100	98.305	Pelodiscus_sinensis
ENSLACG00000017253	POLR2D	100	96.479	ENSPEMG00000018244	Polr2d	100	96.479	Peromyscus_maniculatus_bairdii
ENSLACG00000017253	POLR2D	100	90.845	ENSPMAG00000005021	polr2d	99	90.845	Petromyzon_marinus
ENSLACG00000017253	POLR2D	100	93.056	ENSPFOG00000008969	polr2d	100	93.056	Poecilia_formosa
ENSLACG00000017253	POLR2D	100	93.056	ENSPLAG00000017210	polr2d	100	93.056	Poecilia_latipinna
ENSLACG00000017253	POLR2D	100	93.056	ENSPMEG00000005160	polr2d	100	93.056	Poecilia_mexicana
ENSLACG00000017253	POLR2D	73	97.115	ENSPREG00000021862	polr2d	100	97.115	Poecilia_reticulata
ENSLACG00000017253	POLR2D	100	96.479	ENSPPYG00000012759	POLR2D	100	96.479	Pongo_abelii
ENSLACG00000017253	POLR2D	100	96.479	ENSPCAG00000001396	POLR2D	100	96.479	Procavia_capensis
ENSLACG00000017253	POLR2D	100	95.775	ENSPCOG00000022076	POLR2D	100	95.775	Propithecus_coquereli
ENSLACG00000017253	POLR2D	100	96.479	ENSPVAG00000004002	POLR2D	100	96.479	Pteropus_vampyrus
ENSLACG00000017253	POLR2D	100	93.706	ENSPNAG00000018246	polr2d	100	93.706	Pygocentrus_nattereri
ENSLACG00000017253	POLR2D	100	96.479	ENSRNOG00000016231	Polr2d	100	96.479	Rattus_norvegicus
ENSLACG00000017253	POLR2D	100	96.479	ENSRBIG00000039326	POLR2D	100	96.479	Rhinopithecus_bieti
ENSLACG00000017253	POLR2D	100	96.479	ENSRROG00000023289	POLR2D	100	96.479	Rhinopithecus_roxellana
ENSLACG00000017253	POLR2D	100	95.775	ENSSHAG00000014817	-	100	95.775	Sarcophilus_harrisii
ENSLACG00000017253	POLR2D	92	98.473	ENSSFOG00015024204	polr2d	100	94.444	Scleropages_formosus
ENSLACG00000017253	POLR2D	100	93.056	ENSSDUG00000006060	polr2d	100	93.056	Seriola_dumerili
ENSLACG00000017253	POLR2D	94	96.241	ENSSLDG00000024485	polr2d	100	92.414	Seriola_lalandi_dorsalis
ENSLACG00000017253	POLR2D	82	96.581	ENSSARG00000009037	POLR2D	100	96.581	Sorex_araneus
ENSLACG00000017253	POLR2D	100	95.775	ENSSPUG00000014915	POLR2D	100	95.775	Sphenodon_punctatus
ENSLACG00000017253	POLR2D	100	93.750	ENSSPAG00000013386	polr2d	100	93.750	Stegastes_partitus
ENSLACG00000017253	POLR2D	100	96.479	ENSSSCG00000039230	POLR2D	100	96.479	Sus_scrofa
ENSLACG00000017253	POLR2D	100	95.775	ENSTGUG00000005773	POLR2D	99	95.775	Taeniopygia_guttata
ENSLACG00000017253	POLR2D	100	93.662	ENSTRUG00000004740	polr2d	100	93.662	Takifugu_rubripes
ENSLACG00000017253	POLR2D	100	93.662	ENSTNIG00000011210	polr2d	100	93.662	Tetraodon_nigroviridis
ENSLACG00000017253	POLR2D	82	97.436	ENSTBEG00000006081	POLR2D	100	97.436	Tupaia_belangeri
ENSLACG00000017253	POLR2D	82	97.436	ENSTTRG00000010055	POLR2D	100	97.436	Tursiops_truncatus
ENSLACG00000017253	POLR2D	92	96.923	ENSUAMG00000024374	POLR2D	98	96.923	Ursus_americanus
ENSLACG00000017253	POLR2D	85	96.667	ENSUMAG00000008280	POLR2D	100	98.077	Ursus_maritimus
ENSLACG00000017253	POLR2D	82	97.436	ENSVPAG00000007239	POLR2D	100	97.436	Vicugna_pacos
ENSLACG00000017253	POLR2D	100	96.479	ENSVVUG00000008616	POLR2D	100	96.479	Vulpes_vulpes
ENSLACG00000017253	POLR2D	100	91.549	ENSXETG00000002955	polr2d	100	91.549	Xenopus_tropicalis
ENSLACG00000017253	POLR2D	73	97.115	ENSXCOG00000012668	polr2d	100	97.115	Xiphophorus_couchianus
ENSLACG00000017253	POLR2D	73	97.115	ENSXMAG00000014031	polr2d	100	97.115	Xiphophorus_maculatus