EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017296 (Gene tree)
Gene ID: 102357598
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 66932 bases
Position: chrJH126652.1:2013598-2080529
Accession: 102357598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019672	Suf	PF05843.14	7.5e-83	1	1
ENSLACP00000019671	Suf	PF05843.14	7.5e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019810	CSTF3-202	2148	-	ENSLACP00000019672	715 (aa)	-	H3BCQ1
ENSLACT00000019809	CSTF3-201	3779	XM_005991238	ENSLACP00000019671	715 (aa)	XP_005991300	H3BCQ0

Gene Model

Click here to download ENSLACG00000017296's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017296	CSTF3	100	93.863	ENSG00000176102	CSTF3	100	93.863	Homo_sapiens
ENSLACG00000017296	CSTF3	100	90.795	ENSAPOG00000014054	cstf3	100	90.795	Acanthochromis_polyacanthus
ENSLACG00000017296	CSTF3	99	94.499	ENSAMEG00000007187	CSTF3	99	94.101	Ailuropoda_melanoleuca
ENSLACG00000017296	CSTF3	87	85.256	ENSACIG00000005539	cstf3	100	85.256	Amphilophus_citrinellus
ENSLACG00000017296	CSTF3	100	90.656	ENSAOCG00000010930	cstf3	100	90.656	Amphiprion_ocellaris
ENSLACG00000017296	CSTF3	100	90.656	ENSAPEG00000007903	cstf3	100	90.656	Amphiprion_percula
ENSLACG00000017296	CSTF3	100	90.377	ENSATEG00000000190	cstf3	100	90.377	Anabas_testudineus
ENSLACG00000017296	CSTF3	99	94.209	ENSAPLG00000007217	CSTF3	100	94.209	Anas_platyrhynchos
ENSLACG00000017296	CSTF3	100	92.618	ENSACAG00000002823	CSTF3	100	92.618	Anolis_carolinensis
ENSLACG00000017296	CSTF3	100	93.863	ENSANAG00000020699	CSTF3	100	93.920	Aotus_nancymaae
ENSLACG00000017296	CSTF3	98	90.909	ENSACLG00000007820	cstf3	100	90.237	Astatotilapia_calliptera
ENSLACG00000017296	CSTF3	100	90.516	ENSAMXG00000014198	cstf3	100	90.795	Astyanax_mexicanus
ENSLACG00000017296	CSTF3	100	93.863	ENSBTAG00000008617	CSTF3	100	94.214	Bos_taurus
ENSLACG00000017296	CSTF3	97	48.427	WBGene00006307	suf-1	99	48.427	Caenorhabditis_elegans
ENSLACG00000017296	CSTF3	100	93.863	ENSCJAG00000005533	CSTF3	100	93.920	Callithrix_jacchus
ENSLACG00000017296	CSTF3	100	93.863	ENSCAFG00000007264	CSTF3	100	93.863	Canis_familiaris
ENSLACG00000017296	CSTF3	99	94.358	ENSCAFG00020002715	CSTF3	99	94.358	Canis_lupus_dingo
ENSLACG00000017296	CSTF3	98	92.745	ENSCHIG00000016418	CSTF3	100	93.920	Capra_hircus
ENSLACG00000017296	CSTF3	99	94.217	ENSTSYG00000000451	CSTF3	99	98.444	Carlito_syrichta
ENSLACG00000017296	CSTF3	83	90.307	ENSCAPG00000010958	CSTF3	98	90.307	Cavia_aperea
ENSLACG00000017296	CSTF3	100	93.724	ENSCPOG00000005545	CSTF3	100	93.969	Cavia_porcellus
ENSLACG00000017296	CSTF3	100	93.863	ENSCCAG00000024790	CSTF3	96	98.444	Cebus_capucinus
ENSLACG00000017296	CSTF3	100	93.863	ENSCATG00000007080	CSTF3	100	93.920	Cercocebus_atys
ENSLACG00000017296	CSTF3	100	93.863	ENSCLAG00000016179	CSTF3	100	93.863	Chinchilla_lanigera
ENSLACG00000017296	CSTF3	78	98.872	ENSCHOG00000002497	CSTF3	79	98.872	Choloepus_hoffmanni
ENSLACG00000017296	CSTF3	100	93.315	ENSCPBG00000006753	CSTF3	100	93.315	Chrysemys_picta_bellii
ENSLACG00000017296	CSTF3	100	61.486	ENSCING00000006401	-	99	61.623	Ciona_intestinalis
ENSLACG00000017296	CSTF3	98	61.765	ENSCSAVG00000004851	-	100	61.765	Ciona_savignyi
ENSLACG00000017296	CSTF3	100	93.863	ENSCANG00000035468	CSTF3	100	93.920	Colobus_angolensis_palliatus
ENSLACG00000017296	CSTF3	100	93.445	ENSCGRG00001014773	Cstf3	100	93.445	Cricetulus_griseus_chok1gshd
ENSLACG00000017296	CSTF3	100	93.445	ENSCGRG00000004142	Cstf3	100	93.445	Cricetulus_griseus_crigri
ENSLACG00000017296	CSTF3	100	91.061	ENSCSEG00000014283	cstf3	100	91.061	Cynoglossus_semilaevis
ENSLACG00000017296	CSTF3	100	89.679	ENSCVAG00000019739	cstf3	100	89.679	Cyprinodon_variegatus
ENSLACG00000017296	CSTF3	100	90.782	ENSDARG00000018904	cstf3	100	90.782	Danio_rerio
ENSLACG00000017296	CSTF3	99	93.935	ENSDNOG00000007366	CSTF3	99	93.935	Dasypus_novemcinctus
ENSLACG00000017296	CSTF3	99	86.883	ENSDORG00000005898	Cstf3	99	86.883	Dipodomys_ordii
ENSLACG00000017296	CSTF3	99	57.143	FBgn0003559	su(f)	99	57.143	Drosophila_melanogaster
ENSLACG00000017296	CSTF3	90	88.474	ENSETEG00000017097	CSTF3	90	88.474	Echinops_telfairi
ENSLACG00000017296	CSTF3	84	73.632	ENSEBUG00000015459	cstf3	96	73.632	Eptatretus_burgeri
ENSLACG00000017296	CSTF3	98	94.286	ENSEASG00005019884	CSTF3	97	98.444	Equus_asinus_asinus
ENSLACG00000017296	CSTF3	98	94.286	ENSECAG00000023338	CSTF3	97	98.444	Equus_caballus
ENSLACG00000017296	CSTF3	100	88.424	ENSEEUG00000015167	CSTF3	100	88.424	Erinaceus_europaeus
ENSLACG00000017296	CSTF3	100	90.098	ENSELUG00000023393	cstf3	100	90.098	Esox_lucius
ENSLACG00000017296	CSTF3	100	93.863	ENSFCAG00000030711	CSTF3	100	93.863	Felis_catus
ENSLACG00000017296	CSTF3	93	94.595	ENSFALG00000010764	CSTF3	100	92.780	Ficedula_albicollis
ENSLACG00000017296	CSTF3	100	93.863	ENSFDAG00000012082	CSTF3	100	93.863	Fukomys_damarensis
ENSLACG00000017296	CSTF3	100	89.261	ENSFHEG00000020623	cstf3	100	89.261	Fundulus_heteroclitus
ENSLACG00000017296	CSTF3	100	89.554	ENSGMOG00000012275	cstf3	100	89.554	Gadus_morhua
ENSLACG00000017296	CSTF3	100	93.733	ENSGALG00000011685	CSTF3	100	93.733	Gallus_gallus
ENSLACG00000017296	CSTF3	100	89.679	ENSGAFG00000002181	cstf3	100	89.679	Gambusia_affinis
ENSLACG00000017296	CSTF3	100	90.656	ENSGACG00000015997	cstf3	100	90.656	Gasterosteus_aculeatus
ENSLACG00000017296	CSTF3	100	93.454	ENSGAGG00000006200	CSTF3	100	93.454	Gopherus_agassizii
ENSLACG00000017296	CSTF3	99	88.717	ENSGGOG00000026591	CSTF3	96	93.556	Gorilla_gorilla
ENSLACG00000017296	CSTF3	98	91.051	ENSHBUG00000016656	cstf3	100	90.377	Haplochromis_burtoni
ENSLACG00000017296	CSTF3	100	93.584	ENSHGLG00000017834	CSTF3	100	93.584	Heterocephalus_glaber_female
ENSLACG00000017296	CSTF3	100	93.584	ENSHGLG00100018042	CSTF3	100	93.584	Heterocephalus_glaber_male
ENSLACG00000017296	CSTF3	98	88.085	ENSHCOG00000015218	cstf3	100	87.587	Hippocampus_comes
ENSLACG00000017296	CSTF3	100	91.061	ENSIPUG00000013170	CSTF3	100	91.061	Ictalurus_punctatus
ENSLACG00000017296	CSTF3	100	93.863	ENSSTOG00000013306	CSTF3	100	93.863	Ictidomys_tridecemlineatus
ENSLACG00000017296	CSTF3	99	83.734	ENSJJAG00000018430	Cstf3	99	83.263	Jaculus_jaculus
ENSLACG00000017296	CSTF3	100	89.679	ENSKMAG00000010916	cstf3	100	89.679	Kryptolebias_marmoratus
ENSLACG00000017296	CSTF3	100	90.237	ENSLBEG00000002306	cstf3	100	90.237	Labrus_bergylta
ENSLACG00000017296	CSTF3	100	92.469	ENSLOCG00000004415	cstf3	100	92.469	Lepisosteus_oculatus
ENSLACG00000017296	CSTF3	100	93.724	ENSLAFG00000008712	CSTF3	100	93.724	Loxodonta_africana
ENSLACG00000017296	CSTF3	100	93.863	ENSMFAG00000029516	CSTF3	100	93.920	Macaca_fascicularis
ENSLACG00000017296	CSTF3	100	93.863	ENSMMUG00000002542	CSTF3	100	93.863	Macaca_mulatta
ENSLACG00000017296	CSTF3	100	93.863	ENSMNEG00000021807	CSTF3	100	93.920	Macaca_nemestrina
ENSLACG00000017296	CSTF3	100	93.863	ENSMLEG00000039594	CSTF3	100	93.920	Mandrillus_leucophaeus
ENSLACG00000017296	CSTF3	100	90.377	ENSMAMG00000020423	cstf3	100	90.377	Mastacembelus_armatus
ENSLACG00000017296	CSTF3	98	90.909	ENSMZEG00005012082	cstf3	100	90.237	Maylandia_zebra
ENSLACG00000017296	CSTF3	100	93.593	ENSMGAG00000001383	CSTF3	100	93.593	Meleagris_gallopavo
ENSLACG00000017296	CSTF3	100	93.445	ENSMAUG00000002487	Cstf3	100	93.445	Mesocricetus_auratus
ENSLACG00000017296	CSTF3	100	93.863	ENSMICG00000004784	CSTF3	100	93.920	Microcebus_murinus
ENSLACG00000017296	CSTF3	100	93.445	ENSMOCG00000017583	Cstf3	100	93.445	Microtus_ochrogaster
ENSLACG00000017296	CSTF3	99	90.423	ENSMMOG00000016026	cstf3	95	90.423	Mola_mola
ENSLACG00000017296	CSTF3	100	81.450	ENSMODG00000025205	-	100	81.450	Monodelphis_domestica
ENSLACG00000017296	CSTF3	100	93.445	ENSMODG00000009745	-	100	93.445	Monodelphis_domestica
ENSLACG00000017296	CSTF3	100	90.237	ENSMALG00000012050	cstf3	100	90.237	Monopterus_albus
ENSLACG00000017296	CSTF3	100	93.445	MGP_CAROLIEiJ_G0024026	Cstf3	100	93.445	Mus_caroli
ENSLACG00000017296	CSTF3	100	93.445	ENSMUSG00000027176	Cstf3	100	93.445	Mus_musculus
ENSLACG00000017296	CSTF3	100	93.445	MGP_PahariEiJ_G0025464	Cstf3	100	93.445	Mus_pahari
ENSLACG00000017296	CSTF3	100	93.445	MGP_SPRETEiJ_G0024939	Cstf3	100	93.445	Mus_spretus
ENSLACG00000017296	CSTF3	100	94.003	ENSMPUG00000011457	CSTF3	100	94.003	Mustela_putorius_furo
ENSLACG00000017296	CSTF3	99	94.358	ENSMLUG00000003073	-	99	94.358	Myotis_lucifugus
ENSLACG00000017296	CSTF3	100	90.934	ENSMLUG00000026022	-	100	90.934	Myotis_lucifugus
ENSLACG00000017296	CSTF3	100	93.445	ENSNGAG00000010677	Cstf3	100	93.445	Nannospalax_galili
ENSLACG00000017296	CSTF3	87	90.385	ENSNBRG00000007345	cstf3	100	90.385	Neolamprologus_brichardi
ENSLACG00000017296	CSTF3	100	93.863	ENSNLEG00000017901	CSTF3	100	93.920	Nomascus_leucogenys
ENSLACG00000017296	CSTF3	73	92.161	ENSMEUG00000005640	-	100	92.161	Notamacropus_eugenii
ENSLACG00000017296	CSTF3	67	93.151	ENSOPRG00000000199	-	67	93.151	Ochotona_princeps
ENSLACG00000017296	CSTF3	89	81.918	ENSODEG00000006311	-	97	81.918	Octodon_degus
ENSLACG00000017296	CSTF3	100	93.724	ENSODEG00000016737	-	100	93.724	Octodon_degus
ENSLACG00000017296	CSTF3	98	90.909	ENSONIG00000005563	cstf3	100	90.237	Oreochromis_niloticus
ENSLACG00000017296	CSTF3	90	92.923	ENSOANG00000015140	CSTF3	100	92.923	Ornithorhynchus_anatinus
ENSLACG00000017296	CSTF3	100	94.003	ENSOCUG00000015417	CSTF3	100	94.003	Oryctolagus_cuniculus
ENSLACG00000017296	CSTF3	100	89.106	ENSORLG00000009762	cstf3	100	89.106	Oryzias_latipes
ENSLACG00000017296	CSTF3	100	89.106	ENSORLG00020005540	cstf3	100	89.106	Oryzias_latipes_hni
ENSLACG00000017296	CSTF3	100	88.966	ENSORLG00015003551	cstf3	100	88.966	Oryzias_latipes_hsok
ENSLACG00000017296	CSTF3	100	89.385	ENSOMEG00000003848	cstf3	100	89.385	Oryzias_melastigma
ENSLACG00000017296	CSTF3	100	93.611	ENSOGAG00000010229	CSTF3	100	93.611	Otolemur_garnettii
ENSLACG00000017296	CSTF3	90	93.779	ENSOARG00000017271	CSTF3	99	93.779	Ovis_aries
ENSLACG00000017296	CSTF3	99	90.973	ENSPPAG00000027358	CSTF3	99	90.973	Pan_paniscus
ENSLACG00000017296	CSTF3	100	93.863	ENSPPRG00000016852	CSTF3	100	93.863	Panthera_pardus
ENSLACG00000017296	CSTF3	100	93.863	ENSPTIG00000008716	CSTF3	100	93.863	Panthera_tigris_altaica
ENSLACG00000017296	CSTF3	100	93.863	ENSPTRG00000003485	CSTF3	100	93.863	Pan_troglodytes
ENSLACG00000017296	CSTF3	100	93.863	ENSPANG00000013722	CSTF3	100	93.863	Papio_anubis
ENSLACG00000017296	CSTF3	100	91.620	ENSPKIG00000023648	cstf3	100	91.620	Paramormyrops_kingsleyae
ENSLACG00000017296	CSTF3	100	93.593	ENSPSIG00000009173	CSTF3	100	93.593	Pelodiscus_sinensis
ENSLACG00000017296	CSTF3	77	94.881	ENSPMGG00000000164	cstf3	99	95.370	Periophthalmus_magnuspinnatus
ENSLACG00000017296	CSTF3	100	93.305	ENSPEMG00000011481	Cstf3	100	93.305	Peromyscus_maniculatus_bairdii
ENSLACG00000017296	CSTF3	100	78.611	ENSPMAG00000007282	cstf3	99	79.184	Petromyzon_marinus
ENSLACG00000017296	CSTF3	100	78.412	ENSPCIG00000030419	-	90	78.830	Phascolarctos_cinereus
ENSLACG00000017296	CSTF3	100	90.542	ENSPCIG00000026406	-	100	92.960	Phascolarctos_cinereus
ENSLACG00000017296	CSTF3	100	89.819	ENSPFOG00000017239	cstf3	100	89.819	Poecilia_formosa
ENSLACG00000017296	CSTF3	100	89.819	ENSPLAG00000009456	cstf3	100	89.819	Poecilia_latipinna
ENSLACG00000017296	CSTF3	100	89.819	ENSPMEG00000010320	cstf3	100	89.819	Poecilia_mexicana
ENSLACG00000017296	CSTF3	100	89.819	ENSPREG00000013549	cstf3	100	89.819	Poecilia_reticulata
ENSLACG00000017296	CSTF3	100	93.863	ENSPPYG00000003375	CSTF3	100	93.863	Pongo_abelii
ENSLACG00000017296	CSTF3	71	97.561	ENSPCAG00000008025	-	71	97.561	Procavia_capensis
ENSLACG00000017296	CSTF3	100	88.703	ENSPCOG00000014417	CSTF3	100	88.703	Propithecus_coquereli
ENSLACG00000017296	CSTF3	100	88.563	ENSPVAG00000002350	CSTF3	100	88.563	Pteropus_vampyrus
ENSLACG00000017296	CSTF3	98	91.051	ENSPNYG00000018259	cstf3	100	90.377	Pundamilia_nyererei
ENSLACG00000017296	CSTF3	100	91.899	ENSPNAG00000020182	cstf3	100	91.899	Pygocentrus_nattereri
ENSLACG00000017296	CSTF3	87	93.280	ENSRNOG00000012089	Cstf3	100	93.280	Rattus_norvegicus
ENSLACG00000017296	CSTF3	99	92.948	ENSRBIG00000044258	CSTF3	100	93.920	Rhinopithecus_bieti
ENSLACG00000017296	CSTF3	100	93.863	ENSRROG00000043450	CSTF3	100	93.920	Rhinopithecus_roxellana
ENSLACG00000017296	CSTF3	100	93.863	ENSSBOG00000024764	CSTF3	98	98.444	Saimiri_boliviensis_boliviensis
ENSLACG00000017296	CSTF3	100	82.566	ENSSHAG00000003135	-	99	82.566	Sarcophilus_harrisii
ENSLACG00000017296	CSTF3	100	92.748	ENSSHAG00000018128	-	100	92.748	Sarcophilus_harrisii
ENSLACG00000017296	CSTF3	100	91.760	ENSSFOG00015022133	cstf3	100	91.760	Scleropages_formosus
ENSLACG00000017296	CSTF3	100	90.516	ENSSMAG00000002197	cstf3	100	90.516	Scophthalmus_maximus
ENSLACG00000017296	CSTF3	100	90.377	ENSSDUG00000020426	cstf3	100	90.377	Seriola_dumerili
ENSLACG00000017296	CSTF3	100	90.516	ENSSLDG00000025649	cstf3	100	90.516	Seriola_lalandi_dorsalis
ENSLACG00000017296	CSTF3	100	93.863	ENSSARG00000000391	CSTF3	100	93.863	Sorex_araneus
ENSLACG00000017296	CSTF3	96	93.632	ENSSPUG00000010546	CSTF3	100	93.632	Sphenodon_punctatus
ENSLACG00000017296	CSTF3	100	90.795	ENSSPAG00000004958	cstf3	100	90.795	Stegastes_partitus
ENSLACG00000017296	CSTF3	99	93.706	ENSSSCG00000040954	CSTF3	100	93.296	Sus_scrofa
ENSLACG00000017296	CSTF3	99	93.785	ENSTGUG00000005010	CSTF3	100	93.785	Taeniopygia_guttata
ENSLACG00000017296	CSTF3	100	89.121	ENSTRUG00000004959	cstf3	100	89.121	Takifugu_rubripes
ENSLACG00000017296	CSTF3	99	89.859	ENSTNIG00000013811	cstf3	99	89.859	Tetraodon_nigroviridis
ENSLACG00000017296	CSTF3	90	90.966	ENSTBEG00000001544	CSTF3	90	90.966	Tupaia_belangeri
ENSLACG00000017296	CSTF3	100	91.074	ENSTTRG00000016366	CSTF3	100	91.074	Tursiops_truncatus
ENSLACG00000017296	CSTF3	99	94.358	ENSUMAG00000018971	CSTF3	100	93.920	Ursus_maritimus
ENSLACG00000017296	CSTF3	100	93.724	ENSVPAG00000007800	CSTF3	100	93.724	Vicugna_pacos
ENSLACG00000017296	CSTF3	99	94.358	ENSVVUG00000014938	CSTF3	100	93.920	Vulpes_vulpes
ENSLACG00000017296	CSTF3	88	77.031	ENSXETG00000021399	cstf3	100	77.994	Xenopus_tropicalis
ENSLACG00000017296	CSTF3	67	43.093	ENSXETG00000017946	-	99	43.093	Xenopus_tropicalis
ENSLACG00000017296	CSTF3	87	89.423	ENSXCOG00000011741	cstf3	100	89.423	Xiphophorus_couchianus
ENSLACG00000017296	CSTF3	100	89.679	ENSXMAG00000009545	cstf3	100	89.679	Xiphophorus_maculatus