EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017326 (Gene tree)
Gene ID: 102364776
Gene Symbol: RIOK3
Alias: SUDD
Full Name: RIO kinase 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 25279 bases
Position: chrJH126638.1:2032402-2057680
Accession: 102364776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019705	RIO1	PF01163.22	1.3e-71	1	1
ENSLACP00000019706	RIO1	PF01163.22	1.3e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019843	RIOK3-201	3283	XM_005990751	ENSLACP00000019705	510 (aa)	XP_005990813	H3BCT4
ENSLACT00000019844	RIOK3-202	1539	-	ENSLACP00000019706	513 (aa)	-	H3BCT5

Gene Model

Click here to download ENSLACG00000017326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017326's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017326	RIOK3	99	75.388	ENSG00000101782	RIOK3	99	75.388	Homo_sapiens
ENSLACG00000017326	RIOK3	98	71.344	ENSAPOG00000020861	riok3	99	71.344	Acanthochromis_polyacanthus
ENSLACG00000017326	RIOK3	99	74.419	ENSAMEG00000013754	RIOK3	85	74.131	Ailuropoda_melanoleuca
ENSLACG00000017326	RIOK3	98	70.833	ENSACIG00000019894	riok3	99	70.974	Amphilophus_citrinellus
ENSLACG00000017326	RIOK3	98	73.123	ENSAOCG00000007172	riok3	99	74.066	Amphiprion_ocellaris
ENSLACG00000017326	RIOK3	98	72.925	ENSAPEG00000002536	riok3	99	73.444	Amphiprion_percula
ENSLACG00000017326	RIOK3	98	71.825	ENSATEG00000018303	riok3	98	73.116	Anabas_testudineus
ENSLACG00000017326	RIOK3	96	79.074	ENSAPLG00000006497	RIOK3	96	79.074	Anas_platyrhynchos
ENSLACG00000017326	RIOK3	97	78.024	ENSACAG00000000159	RIOK3	96	78.024	Anolis_carolinensis
ENSLACG00000017326	RIOK3	85	62.132	ENSANAG00000030146	RIOK3	84	67.513	Aotus_nancymaae
ENSLACG00000017326	RIOK3	94	73.597	ENSACLG00000018966	riok3	98	73.750	Astatotilapia_calliptera
ENSLACG00000017326	RIOK3	98	72.144	ENSAMXG00000015617	riok3	99	71.569	Astyanax_mexicanus
ENSLACG00000017326	RIOK3	99	74.806	ENSBTAG00000010042	RIOK3	99	74.806	Bos_taurus
ENSLACG00000017326	RIOK3	94	35.484	WBGene00014012	riok-3	93	35.484	Caenorhabditis_elegans
ENSLACG00000017326	RIOK3	99	75.388	ENSCJAG00000020556	RIOK3	99	75.388	Callithrix_jacchus
ENSLACG00000017326	RIOK3	99	75.000	ENSCAFG00000018201	RIOK3	99	75.000	Canis_familiaris
ENSLACG00000017326	RIOK3	99	75.342	ENSCAFG00020014801	RIOK3	99	79.805	Canis_lupus_dingo
ENSLACG00000017326	RIOK3	99	74.806	ENSCHIG00000009312	RIOK3	99	76.258	Capra_hircus
ENSLACG00000017326	RIOK3	99	74.806	ENSTSYG00000000142	RIOK3	99	76.615	Carlito_syrichta
ENSLACG00000017326	RIOK3	95	74.141	ENSCAPG00000005756	RIOK3	99	74.141	Cavia_aperea
ENSLACG00000017326	RIOK3	99	75.146	ENSCPOG00000007991	RIOK3	99	75.146	Cavia_porcellus
ENSLACG00000017326	RIOK3	99	75.388	ENSCCAG00000028338	RIOK3	99	75.342	Cebus_capucinus
ENSLACG00000017326	RIOK3	99	75.000	ENSCATG00000040824	RIOK3	97	78.605	Cercocebus_atys
ENSLACG00000017326	RIOK3	99	75.340	ENSCLAG00000006767	RIOK3	99	75.340	Chinchilla_lanigera
ENSLACG00000017326	RIOK3	99	75.000	ENSCSAG00000017680	RIOK3	99	75.000	Chlorocebus_sabaeus
ENSLACG00000017326	RIOK3	88	74.265	ENSCHOG00000008343	RIOK3	87	74.265	Choloepus_hoffmanni
ENSLACG00000017326	RIOK3	100	77.713	ENSCPBG00000027226	RIOK3	100	77.713	Chrysemys_picta_bellii
ENSLACG00000017326	RIOK3	97	47.801	ENSCSAVG00000003068	-	99	51.446	Ciona_savignyi
ENSLACG00000017326	RIOK3	96	62.500	ENSCANG00000035939	RIOK3	100	75.339	Colobus_angolensis_palliatus
ENSLACG00000017326	RIOK3	100	74.808	ENSCGRG00001013249	Riok3	100	74.808	Cricetulus_griseus_chok1gshd
ENSLACG00000017326	RIOK3	100	74.423	ENSCGRG00000017636	Riok3	100	74.423	Cricetulus_griseus_crigri
ENSLACG00000017326	RIOK3	98	69.841	ENSCSEG00000018289	riok3	99	71.698	Cynoglossus_semilaevis
ENSLACG00000017326	RIOK3	98	70.437	ENSCVAG00000011848	riok3	99	70.577	Cyprinodon_variegatus
ENSLACG00000017326	RIOK3	99	71.930	ENSDARG00000042751	riok3	99	71.930	Danio_rerio
ENSLACG00000017326	RIOK3	99	75.194	ENSDNOG00000039433	RIOK3	99	75.194	Dasypus_novemcinctus
ENSLACG00000017326	RIOK3	100	74.423	ENSDORG00000011663	Riok3	100	74.423	Dipodomys_ordii
ENSLACG00000017326	RIOK3	91	39.583	FBgn0031643	CG3008	86	40.341	Drosophila_melanogaster
ENSLACG00000017326	RIOK3	94	75.464	ENSETEG00000003689	RIOK3	100	75.464	Echinops_telfairi
ENSLACG00000017326	RIOK3	97	52.800	ENSEBUG00000000555	riok3	98	52.800	Eptatretus_burgeri
ENSLACG00000017326	RIOK3	96	76.056	ENSEASG00005002317	RIOK3	97	76.056	Equus_asinus_asinus
ENSLACG00000017326	RIOK3	96	76.056	ENSECAG00000009028	RIOK3	97	76.056	Equus_caballus
ENSLACG00000017326	RIOK3	96	62.222	ENSEEUG00000007005	RIOK3	99	62.222	Erinaceus_europaeus
ENSLACG00000017326	RIOK3	98	73.108	ENSELUG00000017655	riok3	99	73.108	Esox_lucius
ENSLACG00000017326	RIOK3	99	74.806	ENSFCAG00000000517	RIOK3	99	74.806	Felis_catus
ENSLACG00000017326	RIOK3	96	79.352	ENSFALG00000006145	RIOK3	96	79.352	Ficedula_albicollis
ENSLACG00000017326	RIOK3	99	74.031	ENSFDAG00000001548	RIOK3	99	74.031	Fukomys_damarensis
ENSLACG00000017326	RIOK3	98	71.287	ENSFHEG00000011350	riok3	99	71.429	Fundulus_heteroclitus
ENSLACG00000017326	RIOK3	87	73.051	ENSGMOG00000005157	riok3	97	73.051	Gadus_morhua
ENSLACG00000017326	RIOK3	96	79.150	ENSGALG00000015004	RIOK3	96	79.150	Gallus_gallus
ENSLACG00000017326	RIOK3	90	62.473	ENSGAFG00000002403	riok3	88	62.473	Gambusia_affinis
ENSLACG00000017326	RIOK3	98	70.923	ENSGACG00000000880	riok3	99	71.063	Gasterosteus_aculeatus
ENSLACG00000017326	RIOK3	99	77.647	ENSGAGG00000024785	RIOK3	99	77.647	Gopherus_agassizii
ENSLACG00000017326	RIOK3	55	75.694	ENSGGOG00000036734	-	93	75.694	Gorilla_gorilla
ENSLACG00000017326	RIOK3	98	71.429	ENSHBUG00000003233	riok3	99	71.571	Haplochromis_burtoni
ENSLACG00000017326	RIOK3	99	74.757	ENSHGLG00000003885	RIOK3	99	74.757	Heterocephalus_glaber_female
ENSLACG00000017326	RIOK3	99	74.757	ENSHGLG00100002077	RIOK3	99	74.757	Heterocephalus_glaber_male
ENSLACG00000017326	RIOK3	96	71.230	ENSHCOG00000006794	riok3	97	71.230	Hippocampus_comes
ENSLACG00000017326	RIOK3	99	70.530	ENSIPUG00000001406	Riok3	99	70.530	Ictalurus_punctatus
ENSLACG00000017326	RIOK3	99	75.581	ENSSTOG00000006517	RIOK3	99	75.581	Ictidomys_tridecemlineatus
ENSLACG00000017326	RIOK3	96	77.264	ENSJJAG00000023689	Riok3	96	76.693	Jaculus_jaculus
ENSLACG00000017326	RIOK3	96	72.874	ENSKMAG00000007259	riok3	97	72.874	Kryptolebias_marmoratus
ENSLACG00000017326	RIOK3	97	71.600	ENSLBEG00000013689	riok3	98	71.743	Labrus_bergylta
ENSLACG00000017326	RIOK3	99	76.667	ENSLOCG00000001652	riok3	99	76.667	Lepisosteus_oculatus
ENSLACG00000017326	RIOK3	99	75.048	ENSLAFG00000001380	RIOK3	99	75.048	Loxodonta_africana
ENSLACG00000017326	RIOK3	99	75.194	ENSMMUG00000021478	RIOK3	97	78.605	Macaca_mulatta
ENSLACG00000017326	RIOK3	99	66.882	ENSMNEG00000041106	RIOK3	99	62.209	Macaca_nemestrina
ENSLACG00000017326	RIOK3	99	75.194	ENSMLEG00000028187	RIOK3	97	78.605	Mandrillus_leucophaeus
ENSLACG00000017326	RIOK3	97	72.709	ENSMAMG00000008502	riok3	97	72.854	Mastacembelus_armatus
ENSLACG00000017326	RIOK3	98	71.230	ENSMZEG00005020212	riok3	99	71.372	Maylandia_zebra
ENSLACG00000017326	RIOK3	99	76.744	ENSMGAG00000010079	RIOK3	99	76.744	Meleagris_gallopavo
ENSLACG00000017326	RIOK3	99	75.194	ENSMAUG00000020527	Riok3	99	75.194	Mesocricetus_auratus
ENSLACG00000017326	RIOK3	99	75.581	ENSMICG00000009293	RIOK3	99	75.581	Microcebus_murinus
ENSLACG00000017326	RIOK3	99	73.981	ENSMOCG00000012114	Riok3	96	73.981	Microtus_ochrogaster
ENSLACG00000017326	RIOK3	94	69.691	ENSMMOG00000019204	riok3	98	69.691	Mola_mola
ENSLACG00000017326	RIOK3	99	75.242	ENSMODG00000021496	RIOK3	99	75.242	Monodelphis_domestica
ENSLACG00000017326	RIOK3	98	72.079	ENSMALG00000020848	riok3	99	72.079	Monopterus_albus
ENSLACG00000017326	RIOK3	99	75.000	MGP_CAROLIEiJ_G0022001	Riok3	99	75.000	Mus_caroli
ENSLACG00000017326	RIOK3	99	75.000	ENSMUSG00000024404	Riok3	97	92.857	Mus_musculus
ENSLACG00000017326	RIOK3	99	75.000	MGP_PahariEiJ_G0018739	Riok3	99	75.000	Mus_pahari
ENSLACG00000017326	RIOK3	99	74.806	ENSMPUG00000005772	RIOK3	99	74.806	Mustela_putorius_furo
ENSLACG00000017326	RIOK3	99	73.837	ENSMLUG00000007081	RIOK3	99	73.837	Myotis_lucifugus
ENSLACG00000017326	RIOK3	99	75.388	ENSNGAG00000011446	Riok3	99	75.388	Nannospalax_galili
ENSLACG00000017326	RIOK3	77	70.673	ENSNBRG00000016677	riok3	84	70.673	Neolamprologus_brichardi
ENSLACG00000017326	RIOK3	99	75.000	ENSNLEG00000006758	RIOK3	99	75.000	Nomascus_leucogenys
ENSLACG00000017326	RIOK3	99	76.209	ENSMEUG00000006292	RIOK3	99	76.209	Notamacropus_eugenii
ENSLACG00000017326	RIOK3	100	74.808	ENSOPRG00000004803	RIOK3	100	74.808	Ochotona_princeps
ENSLACG00000017326	RIOK3	99	75.534	ENSODEG00000006444	RIOK3	99	75.534	Octodon_degus
ENSLACG00000017326	RIOK3	96	71.026	ENSONIG00000013422	riok3	99	71.169	Oreochromis_niloticus
ENSLACG00000017326	RIOK3	93	78.216	ENSOANG00000012074	RIOK3	99	78.216	Ornithorhynchus_anatinus
ENSLACG00000017326	RIOK3	99	75.388	ENSOCUG00000016820	RIOK3	99	75.388	Oryctolagus_cuniculus
ENSLACG00000017326	RIOK3	98	70.518	ENSORLG00000003395	riok3	99	70.518	Oryzias_latipes
ENSLACG00000017326	RIOK3	98	70.518	ENSORLG00020000672	riok3	99	70.518	Oryzias_latipes_hni
ENSLACG00000017326	RIOK3	98	70.518	ENSORLG00015007372	riok3	99	70.518	Oryzias_latipes_hsok
ENSLACG00000017326	RIOK3	98	71.912	ENSOMEG00000001380	riok3	99	71.912	Oryzias_melastigma
ENSLACG00000017326	RIOK3	99	75.581	ENSOGAG00000014502	RIOK3	89	75.581	Otolemur_garnettii
ENSLACG00000017326	RIOK3	99	75.000	ENSOARG00000008042	RIOK3	99	75.000	Ovis_aries
ENSLACG00000017326	RIOK3	99	75.388	ENSPPAG00000030258	RIOK3	96	78.605	Pan_paniscus
ENSLACG00000017326	RIOK3	99	74.612	ENSPPRG00000023302	RIOK3	99	74.612	Panthera_pardus
ENSLACG00000017326	RIOK3	99	74.806	ENSPTIG00000000960	RIOK3	99	74.806	Panthera_tigris_altaica
ENSLACG00000017326	RIOK3	99	75.194	ENSPTRG00000009918	RIOK3	96	78.372	Pan_troglodytes
ENSLACG00000017326	RIOK3	99	75.194	ENSPANG00000011485	RIOK3	97	78.605	Papio_anubis
ENSLACG00000017326	RIOK3	99	75.098	ENSPKIG00000018297	riok3	99	75.098	Paramormyrops_kingsleyae
ENSLACG00000017326	RIOK3	99	76.667	ENSPSIG00000006250	RIOK3	99	76.667	Pelodiscus_sinensis
ENSLACG00000017326	RIOK3	93	71.279	ENSPMGG00000009414	riok3	99	71.279	Periophthalmus_magnuspinnatus
ENSLACG00000017326	RIOK3	99	75.194	ENSPEMG00000023794	Riok3	99	75.194	Peromyscus_maniculatus_bairdii
ENSLACG00000017326	RIOK3	83	72.066	ENSPMAG00000003258	riok3	97	72.066	Petromyzon_marinus
ENSLACG00000017326	RIOK3	92	78.033	ENSPCIG00000013991	RIOK3	99	78.033	Phascolarctos_cinereus
ENSLACG00000017326	RIOK3	96	71.633	ENSPFOG00000024127	riok3	99	70.775	Poecilia_formosa
ENSLACG00000017326	RIOK3	96	71.690	ENSPLAG00000004956	riok3	99	70.833	Poecilia_latipinna
ENSLACG00000017326	RIOK3	96	71.690	ENSPMEG00000020108	riok3	99	70.833	Poecilia_mexicana
ENSLACG00000017326	RIOK3	98	70.577	ENSPREG00000010010	riok3	99	70.577	Poecilia_reticulata
ENSLACG00000017326	RIOK3	99	69.126	ENSPPYG00000009062	RIOK3	99	69.126	Pongo_abelii
ENSLACG00000017326	RIOK3	77	73.529	ENSPCAG00000001021	RIOK3	76	73.529	Procavia_capensis
ENSLACG00000017326	RIOK3	99	75.194	ENSPCOG00000022631	RIOK3	96	78.271	Propithecus_coquereli
ENSLACG00000017326	RIOK3	99	62.791	ENSPVAG00000015817	RIOK3	99	62.791	Pteropus_vampyrus
ENSLACG00000017326	RIOK3	98	71.230	ENSPNYG00000003271	riok3	99	71.372	Pundamilia_nyererei
ENSLACG00000017326	RIOK3	97	73.200	ENSPNAG00000006213	riok3	99	72.962	Pygocentrus_nattereri
ENSLACG00000017326	RIOK3	100	74.231	ENSRNOG00000023376	Riok3	100	74.231	Rattus_norvegicus
ENSLACG00000017326	RIOK3	99	75.146	ENSRBIG00000035071	RIOK3	97	78.605	Rhinopithecus_bieti
ENSLACG00000017326	RIOK3	99	75.146	ENSRROG00000045710	RIOK3	97	78.605	Rhinopithecus_roxellana
ENSLACG00000017326	RIOK3	99	75.388	ENSSBOG00000034387	RIOK3	96	78.972	Saimiri_boliviensis_boliviensis
ENSLACG00000017326	RIOK3	99	75.048	ENSSHAG00000011854	RIOK3	99	75.048	Sarcophilus_harrisii
ENSLACG00000017326	RIOK3	99	72.320	ENSSFOG00015012912	riok3	99	73.642	Scleropages_formosus
ENSLACG00000017326	RIOK3	97	73.016	ENSSMAG00000011527	riok3	98	73.016	Scophthalmus_maximus
ENSLACG00000017326	RIOK3	97	73.108	ENSSDUG00000016018	riok3	97	73.307	Seriola_dumerili
ENSLACG00000017326	RIOK3	64	76.301	ENSSLDG00000022246	riok3	94	76.301	Seriola_lalandi_dorsalis
ENSLACG00000017326	RIOK3	88	75.000	ENSSARG00000010154	RIOK3	86	75.000	Sorex_araneus
ENSLACG00000017326	RIOK3	99	78.627	ENSSPUG00000015246	RIOK3	98	78.627	Sphenodon_punctatus
ENSLACG00000017326	RIOK3	98	71.542	ENSSPAG00000000601	riok3	99	71.542	Stegastes_partitus
ENSLACG00000017326	RIOK3	99	74.419	ENSSSCG00000029518	RIOK3	99	78.719	Sus_scrofa
ENSLACG00000017326	RIOK3	96	78.873	ENSTGUG00000010392	RIOK3	96	78.873	Taeniopygia_guttata
ENSLACG00000017326	RIOK3	98	71.287	ENSTRUG00000007055	riok3	99	71.344	Takifugu_rubripes
ENSLACG00000017326	RIOK3	94	68.257	ENSTNIG00000001855	riok3	99	68.399	Tetraodon_nigroviridis
ENSLACG00000017326	RIOK3	53	77.778	ENSTBEG00000015851	RIOK3	53	77.778	Tupaia_belangeri
ENSLACG00000017326	RIOK3	99	74.612	ENSTTRG00000008839	RIOK3	99	74.612	Tursiops_truncatus
ENSLACG00000017326	RIOK3	99	74.612	ENSUAMG00000018410	RIOK3	99	74.612	Ursus_americanus
ENSLACG00000017326	RIOK3	99	74.805	ENSUMAG00000020218	RIOK3	97	74.659	Ursus_maritimus
ENSLACG00000017326	RIOK3	99	75.000	ENSVPAG00000009034	RIOK3	99	75.000	Vicugna_pacos
ENSLACG00000017326	RIOK3	99	75.000	ENSVVUG00000003651	RIOK3	75	75.000	Vulpes_vulpes
ENSLACG00000017326	RIOK3	99	75.195	ENSXETG00000027370	riok3	98	76.353	Xenopus_tropicalis
ENSLACG00000017326	RIOK3	95	71.487	ENSXCOG00000001032	riok3	99	71.487	Xiphophorus_couchianus
ENSLACG00000017326	RIOK3	98	70.577	ENSXMAG00000012902	riok3	99	70.577	Xiphophorus_maculatus