EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017332 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 83659 bases
Position: chrJH126734.1:2033380-2117038
Accession: 102346889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019712	Nop52	PF05997.12	1.1e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019850	-	3020	XM_005993623	ENSLACP00000019712	744 (aa)	-	H3BCU1

Gene Model

Click here to download ENSLACG00000017332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017332	-	99	42.377	ENSG00000160208	RRP1B	50	54.242	Homo_sapiens
ENSLACG00000017332	-	51	52.646	ENSAMEG00000011448	RRP1	81	52.646	Ailuropoda_melanoleuca
ENSLACG00000017332	-	68	51.989	ENSAMEG00000011401	RRP1B	68	51.989	Ailuropoda_melanoleuca
ENSLACG00000017332	-	53	66.667	ENSAOCG00000017894	-	92	55.769	Amphiprion_ocellaris
ENSLACG00000017332	-	61	50.681	ENSAPEG00000024150	-	50	51.220	Amphiprion_percula
ENSLACG00000017332	-	66	48.148	ENSATEG00000005045	-	50	48.942	Anabas_testudineus
ENSLACG00000017332	-	94	43.883	ENSAPLG00000004310	RRP1B	100	44.295	Anas_platyrhynchos
ENSLACG00000017332	-	99	40.492	ENSANAG00000034889	RRP1B	50	53.230	Aotus_nancymaae
ENSLACG00000017332	-	99	40.885	ENSBTAG00000017418	RRP1B	75	51.762	Bos_taurus
ENSLACG00000017332	-	51	51.157	ENSBTAG00000003981	RRP1	79	53.699	Bos_taurus
ENSLACG00000017332	-	52	52.174	ENSCJAG00000043205	RRP1	82	50.856	Callithrix_jacchus
ENSLACG00000017332	-	99	40.360	ENSCJAG00000017077	RRP1B	99	39.924	Callithrix_jacchus
ENSLACG00000017332	-	51	52.742	ENSCAFG00000010646	RRP1	80	51.187	Canis_familiaris
ENSLACG00000017332	-	64	52.273	ENSCAFG00000010621	RRP1B	66	52.273	Canis_familiaris
ENSLACG00000017332	-	51	52.742	ENSCAFG00020018979	RRP1	74	56.034	Canis_lupus_dingo
ENSLACG00000017332	-	70	52.821	ENSCAFG00020018901	RRP1B	70	52.821	Canis_lupus_dingo
ENSLACG00000017332	-	52	51.948	ENSCHIG00000020948	RRP1	83	52.699	Capra_hircus
ENSLACG00000017332	-	66	52.846	ENSCHIG00000021519	RRP1B	66	52.846	Capra_hircus
ENSLACG00000017332	-	99	37.714	ENSCPOG00000002396	RRP1B	99	38.645	Cavia_porcellus
ENSLACG00000017332	-	99	41.335	ENSCCAG00000029384	RRP1B	57	53.197	Cebus_capucinus
ENSLACG00000017332	-	58	48.975	ENSCCAG00000029828	RRP1	87	50.725	Cebus_capucinus
ENSLACG00000017332	-	99	41.570	ENSCATG00000017423	RRP1B	50	53.470	Cercocebus_atys
ENSLACG00000017332	-	99	36.862	ENSCLAG00000005622	RRP1B	99	36.983	Chinchilla_lanigera
ENSLACG00000017332	-	55	45.894	ENSCLAG00000011639	RRP1	83	48.312	Chinchilla_lanigera
ENSLACG00000017332	-	99	42.085	ENSCSAG00000007961	RRP1B	50	53.728	Chlorocebus_sabaeus
ENSLACG00000017332	-	99	46.461	ENSCPBG00000010310	RRP1B	99	46.676	Chrysemys_picta_bellii
ENSLACG00000017332	-	99	41.956	ENSCANG00000040952	RRP1B	99	40.944	Colobus_angolensis_palliatus
ENSLACG00000017332	-	99	40.442	ENSCGRG00001023882	-	99	39.426	Cricetulus_griseus_chok1gshd
ENSLACG00000017332	-	99	40.285	ENSCGRG00001010889	-	99	39.272	Cricetulus_griseus_chok1gshd
ENSLACG00000017332	-	95	38.762	ENSCGRG00000001553	Rrp1b	97	37.893	Cricetulus_griseus_crigri
ENSLACG00000017332	-	59	49.730	ENSCSEG00000020711	-	80	48.656	Cynoglossus_semilaevis
ENSLACG00000017332	-	52	45.974	ENSCVAG00000017568	-	97	46.494	Cyprinodon_variegatus
ENSLACG00000017332	-	56	47.293	ENSDARG00000103337	rrp1	71	44.000	Danio_rerio
ENSLACG00000017332	-	82	46.358	ENSDNOG00000032774	RRP1B	99	39.664	Dasypus_novemcinctus
ENSLACG00000017332	-	55	49.756	ENSDNOG00000019880	RRP1	83	52.219	Dasypus_novemcinctus
ENSLACG00000017332	-	64	58.824	ENSETEG00000019489	RRP1B	60	60.000	Echinops_telfairi
ENSLACG00000017332	-	51	50.663	ENSEASG00005001673	RRP1	83	51.724	Equus_asinus_asinus
ENSLACG00000017332	-	99	40.439	ENSEASG00005001687	RRP1B	50	51.031	Equus_asinus_asinus
ENSLACG00000017332	-	51	50.646	ENSECAG00000015703	RRP1	83	52.255	Equus_caballus
ENSLACG00000017332	-	52	50.773	ENSECAG00000018018	RRP1B	50	50.773	Equus_caballus
ENSLACG00000017332	-	65	49.180	ENSELUG00000015885	-	89	47.643	Esox_lucius
ENSLACG00000017332	-	70	50.886	ENSFCAG00000010272	RRP1B	69	51.554	Felis_catus
ENSLACG00000017332	-	50	52.162	ENSFCAG00000008434	RRP1	80	52.703	Felis_catus
ENSLACG00000017332	-	92	42.371	ENSFALG00000002024	RRP1B	100	42.897	Ficedula_albicollis
ENSLACG00000017332	-	55	48.030	ENSFDAG00000013728	RRP1	84	49.100	Fukomys_damarensis
ENSLACG00000017332	-	99	36.531	ENSFDAG00000010899	RRP1B	95	38.017	Fukomys_damarensis
ENSLACG00000017332	-	53	60.656	ENSFHEG00000016314	-	50	46.687	Fundulus_heteroclitus
ENSLACG00000017332	-	64	46.978	ENSGMOG00000001953	-	69	46.011	Gadus_morhua
ENSLACG00000017332	-	99	45.860	ENSGALG00000035696	RRP1B	99	45.876	Gallus_gallus
ENSLACG00000017332	-	99	36.653	ENSGACG00000001438	rrp1	77	46.717	Gasterosteus_aculeatus
ENSLACG00000017332	-	99	42.248	ENSGGOG00000012069	RRP1B	50	54.242	Gorilla_gorilla
ENSLACG00000017332	-	51	50.000	ENSHGLG00000004968	RRP1B	55	50.000	Heterocephalus_glaber_female
ENSLACG00000017332	-	70	43.333	ENSHGLG00100002232	RRP1B	74	40.960	Heterocephalus_glaber_male
ENSLACG00000017332	-	67	44.048	ENSHCOG00000018388	-	60	44.048	Hippocampus_comes
ENSLACG00000017332	-	60	48.958	ENSIPUG00000000673	-	75	43.147	Ictalurus_punctatus
ENSLACG00000017332	-	52	50.260	ENSSTOG00000011790	RRP1B	52	51.562	Ictidomys_tridecemlineatus
ENSLACG00000017332	-	56	49.522	ENSSTOG00000011116	RRP1	84	51.958	Ictidomys_tridecemlineatus
ENSLACG00000017332	-	64	47.863	ENSKMAG00000005539	rrp1	76	47.150	Kryptolebias_marmoratus
ENSLACG00000017332	-	52	48.010	ENSLAFG00000022901	RRP1	96	46.347	Loxodonta_africana
ENSLACG00000017332	-	88	37.679	ENSLAFG00000000766	RRP1B	87	54.692	Loxodonta_africana
ENSLACG00000017332	-	99	41.956	ENSMFAG00000039152	RRP1B	99	40.944	Macaca_fascicularis
ENSLACG00000017332	-	99	41.731	ENSMMUG00000000104	RRP1B	99	41.192	Macaca_mulatta
ENSLACG00000017332	-	99	41.956	ENSMNEG00000034269	RRP1B	99	41.321	Macaca_nemestrina
ENSLACG00000017332	-	94	40.544	ENSMLEG00000040044	RRP1B	99	39.563	Mandrillus_leucophaeus
ENSLACG00000017332	-	70	48.615	ENSMAMG00000007131	-	50	46.883	Mastacembelus_armatus
ENSLACG00000017332	-	99	45.849	ENSMGAG00000014591	RRP1B	99	45.592	Meleagris_gallopavo
ENSLACG00000017332	-	99	39.610	ENSMAUG00000021508	Rrp1b	99	38.401	Mesocricetus_auratus
ENSLACG00000017332	-	99	44.761	ENSMODG00000021033	RRP1B	99	44.689	Monodelphis_domestica
ENSLACG00000017332	-	99	39.789	MGP_CAROLIEiJ_G0021376	Rrp1b	99	40.000	Mus_caroli
ENSLACG00000017332	-	99	40.156	ENSMUSG00000058392	Rrp1b	99	40.210	Mus_musculus
ENSLACG00000017332	-	99	41.255	MGP_SPRETEiJ_G0022290	Rrp1b	99	40.909	Mus_spretus
ENSLACG00000017332	-	56	48.503	ENSMPUG00000009810	RRP1B	65	48.503	Mustela_putorius_furo
ENSLACG00000017332	-	51	48.140	ENSMPUG00000009826	RRP1	88	48.140	Mustela_putorius_furo
ENSLACG00000017332	-	68	54.805	ENSMLUG00000007738	RRP1B	65	55.526	Myotis_lucifugus
ENSLACG00000017332	-	52	46.547	ENSNGAG00000021073	Rrp1b	99	36.364	Nannospalax_galili
ENSLACG00000017332	-	52	53.728	ENSNLEG00000001490	RRP1B	52	53.728	Nomascus_leucogenys
ENSLACG00000017332	-	57	79.592	ENSMEUG00000003226	-	61	68.696	Notamacropus_eugenii
ENSLACG00000017332	-	72	49.507	ENSOANG00000006470	RRP1B	74	49.507	Ornithorhynchus_anatinus
ENSLACG00000017332	-	57	48.092	ENSOCUG00000025931	RRP1B	62	48.092	Oryctolagus_cuniculus
ENSLACG00000017332	-	57	66.667	ENSORLG00020007199	-	56	52.316	Oryzias_latipes_hni
ENSLACG00000017332	-	62	51.226	ENSORLG00015004425	-	55	52.316	Oryzias_latipes_hsok
ENSLACG00000017332	-	65	48.413	ENSOMEG00000016910	-	56	54.762	Oryzias_melastigma
ENSLACG00000017332	-	53	48.642	ENSOGAG00000006105	RRP1	86	50.372	Otolemur_garnettii
ENSLACG00000017332	-	64	52.646	ENSOGAG00000009872	RRP1B	77	50.895	Otolemur_garnettii
ENSLACG00000017332	-	61	52.121	ENSOARG00000011314	RRP1B	63	52.121	Ovis_aries
ENSLACG00000017332	-	50	51.743	ENSPPRG00000010656	RRP1	81	52.279	Panthera_pardus
ENSLACG00000017332	-	68	52.533	ENSPPRG00000010356	RRP1B	68	52.533	Panthera_pardus
ENSLACG00000017332	-	64	49.405	ENSPTIG00000016894	RRP1B	78	49.405	Panthera_tigris_altaica
ENSLACG00000017332	-	99	42.506	ENSPTRG00000013958	RRP1B	50	54.242	Pan_troglodytes
ENSLACG00000017332	-	58	48.724	ENSPANG00000015097	RRP1	86	49.639	Papio_anubis
ENSLACG00000017332	-	99	41.990	ENSPANG00000011090	RRP1B	99	41.071	Papio_anubis
ENSLACG00000017332	-	99	38.171	ENSPKIG00000003422	-	78	46.888	Paramormyrops_kingsleyae
ENSLACG00000017332	-	99	40.285	ENSPEMG00000022490	Rrp1b	50	50.789	Peromyscus_maniculatus_bairdii
ENSLACG00000017332	-	52	51.163	ENSPCIG00000015523	-	81	50.904	Phascolarctos_cinereus
ENSLACG00000017332	-	99	44.216	ENSPCIG00000015513	RRP1B	99	44.129	Phascolarctos_cinereus
ENSLACG00000017332	-	50	49.468	ENSPLAG00000016684	-	53	49.735	Poecilia_latipinna
ENSLACG00000017332	-	67	49.468	ENSPMEG00000007042	-	59	49.735	Poecilia_mexicana
ENSLACG00000017332	-	66	48.148	ENSPREG00000015673	-	59	48.677	Poecilia_reticulata
ENSLACG00000017332	-	99	42.342	ENSPPYG00000011470	RRP1B	99	41.327	Pongo_abelii
ENSLACG00000017332	-	99	40.498	ENSPCOG00000017927	RRP1B	52	53.158	Propithecus_coquereli
ENSLACG00000017332	-	75	47.059	ENSPVAG00000001436	RRP1B	99	38.163	Pteropus_vampyrus
ENSLACG00000017332	-	99	40.000	ENSRNOG00000001194	Rrp1b	59	46.358	Rattus_norvegicus
ENSLACG00000017332	-	99	38.760	ENSRBIG00000041689	RRP1B	99	37.883	Rhinopithecus_bieti
ENSLACG00000017332	-	99	41.828	ENSRROG00000031499	RRP1B	99	40.816	Rhinopithecus_roxellana
ENSLACG00000017332	-	52	52.442	ENSSBOG00000034689	RRP1	83	52.442	Saimiri_boliviensis_boliviensis
ENSLACG00000017332	-	70	44.250	ENSSFOG00015003932	-	64	46.702	Scleropages_formosus
ENSLACG00000017332	-	66	49.863	ENSSMAG00000016847	-	86	46.216	Scophthalmus_maximus
ENSLACG00000017332	-	65	52.139	ENSSDUG00000000551	-	54	52.139	Seriola_dumerili
ENSLACG00000017332	-	65	52.941	ENSSLDG00000002538	-	54	52.957	Seriola_lalandi_dorsalis
ENSLACG00000017332	-	56	49.624	ENSSARG00000003108	-	61	49.624	Sorex_araneus
ENSLACG00000017332	-	65	47.815	ENSSPAG00000005370	-	55	48.551	Stegastes_partitus
ENSLACG00000017332	-	50	49.735	ENSSSCG00000037061	RRP1	80	51.323	Sus_scrofa
ENSLACG00000017332	-	66	51.499	ENSSSCG00000021698	RRP1B	69	53.659	Sus_scrofa
ENSLACG00000017332	-	63	47.814	ENSTNIG00000005053	rrp1	78	49.046	Tetraodon_nigroviridis
ENSLACG00000017332	-	75	47.340	ENSTBEG00000000422	RRP1B	88	51.818	Tupaia_belangeri
ENSLACG00000017332	-	69	50.639	ENSTTRG00000000723	RRP1B	67	52.446	Tursiops_truncatus
ENSLACG00000017332	-	72	52.320	ENSUAMG00000026765	RRP1B	76	52.320	Ursus_americanus
ENSLACG00000017332	-	63	51.220	ENSUMAG00000025510	RRP1B	90	51.220	Ursus_maritimus
ENSLACG00000017332	-	64	52.273	ENSVVUG00000024509	RRP1B	66	52.273	Vulpes_vulpes
ENSLACG00000017332	-	59	48.318	ENSXETG00000013683	rrp1b	64	48.148	Xenopus_tropicalis
ENSLACG00000017332	-	65	47.826	ENSXMAG00000023123	-	58	51.020	Xiphophorus_maculatus