EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017338 (Gene tree)
Gene ID: 102352823
Gene Symbol: RPUSD2
Alias: C15orf19|C18B11|FLJ31409|PUS9
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 4838 bases
Position: chrJH126639.1:2035145-2039982
Accession: 102352823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019718	PseudoU_synth_2	PF00849.22	2.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000019856	RPUSD2-201	1371	XM_005990788	ENSLACP00000019718	456 (aa)	XP_005990850	H3BCU7

Gene Model

Click here to download ENSLACG00000017338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017338	RPUSD2	100	64.629	ENSG00000166133	RPUSD2	80	64.629	Homo_sapiens
ENSLACG00000017338	RPUSD2	99	60.087	ENSAPOG00000000817	rpusd2	79	60.087	Acanthochromis_polyacanthus
ENSLACG00000017338	RPUSD2	100	63.816	ENSAMEG00000016996	RPUSD2	80	63.816	Ailuropoda_melanoleuca
ENSLACG00000017338	RPUSD2	99	60.220	ENSACIG00000024029	rpusd2	87	60.659	Amphilophus_citrinellus
ENSLACG00000017338	RPUSD2	99	60.044	ENSAOCG00000015237	rpusd2	79	60.044	Amphiprion_ocellaris
ENSLACG00000017338	RPUSD2	99	60.262	ENSAPEG00000021763	rpusd2	79	60.262	Amphiprion_percula
ENSLACG00000017338	RPUSD2	99	60.043	ENSATEG00000015242	rpusd2	79	60.043	Anabas_testudineus
ENSLACG00000017338	RPUSD2	97	64.877	ENSAPLG00000004723	RPUSD2	100	64.414	Anas_platyrhynchos
ENSLACG00000017338	RPUSD2	99	66.449	ENSACAG00000013893	RPUSD2	91	65.934	Anolis_carolinensis
ENSLACG00000017338	RPUSD2	100	65.646	ENSANAG00000009691	RPUSD2	80	65.646	Aotus_nancymaae
ENSLACG00000017338	RPUSD2	99	58.531	ENSACLG00000019531	rpusd2	79	58.531	Astatotilapia_calliptera
ENSLACG00000017338	RPUSD2	100	59.343	ENSAMXG00000013376	rpusd2	79	60.206	Astyanax_mexicanus
ENSLACG00000017338	RPUSD2	99	65.275	ENSBTAG00000003193	RPUSD2	79	65.275	Bos_taurus
ENSLACG00000017338	RPUSD2	66	40.328	WBGene00019498	K07E8.7	80	40.328	Caenorhabditis_elegans
ENSLACG00000017338	RPUSD2	100	64.474	ENSCJAG00000020841	RPUSD2	80	64.474	Callithrix_jacchus
ENSLACG00000017338	RPUSD2	100	65.132	ENSCAFG00000009165	RPUSD2	79	65.132	Canis_familiaris
ENSLACG00000017338	RPUSD2	100	65.132	ENSCAFG00020005849	RPUSD2	79	65.132	Canis_lupus_dingo
ENSLACG00000017338	RPUSD2	99	65.055	ENSCHIG00000006152	RPUSD2	79	65.055	Capra_hircus
ENSLACG00000017338	RPUSD2	100	63.596	ENSTSYG00000012844	RPUSD2	80	63.596	Carlito_syrichta
ENSLACG00000017338	RPUSD2	52	78.059	ENSCAPG00000006895	-	82	78.059	Cavia_aperea
ENSLACG00000017338	RPUSD2	100	63.974	ENSCPOG00000013201	RPUSD2	80	63.974	Cavia_porcellus
ENSLACG00000017338	RPUSD2	100	64.693	ENSCCAG00000024378	RPUSD2	80	64.693	Cebus_capucinus
ENSLACG00000017338	RPUSD2	100	64.565	ENSCATG00000043734	RPUSD2	80	64.565	Cercocebus_atys
ENSLACG00000017338	RPUSD2	100	65.351	ENSCLAG00000011862	RPUSD2	80	65.351	Chinchilla_lanigera
ENSLACG00000017338	RPUSD2	100	64.565	ENSCSAG00000007538	RPUSD2	85	64.565	Chlorocebus_sabaeus
ENSLACG00000017338	RPUSD2	80	63.736	ENSCHOG00000004834	RPUSD2	63	63.736	Choloepus_hoffmanni
ENSLACG00000017338	RPUSD2	99	68.103	ENSCPBG00000013419	RPUSD2	87	68.103	Chrysemys_picta_bellii
ENSLACG00000017338	RPUSD2	100	64.565	ENSCANG00000003659	RPUSD2	80	64.565	Colobus_angolensis_palliatus
ENSLACG00000017338	RPUSD2	100	63.816	ENSCGRG00001009839	Rpusd2	76	63.816	Cricetulus_griseus_chok1gshd
ENSLACG00000017338	RPUSD2	100	63.816	ENSCGRG00000012348	Rpusd2	78	63.816	Cricetulus_griseus_crigri
ENSLACG00000017338	RPUSD2	99	59.170	ENSCSEG00000001953	rpusd2	78	59.170	Cynoglossus_semilaevis
ENSLACG00000017338	RPUSD2	99	60.526	ENSCVAG00000010848	rpusd2	79	60.526	Cyprinodon_variegatus
ENSLACG00000017338	RPUSD2	100	60.480	ENSDARG00000060992	rpusd2	77	60.907	Danio_rerio
ENSLACG00000017338	RPUSD2	100	63.399	ENSDNOG00000047745	RPUSD2	80	63.399	Dasypus_novemcinctus
ENSLACG00000017338	RPUSD2	99	64.396	ENSDORG00000009092	Rpusd2	100	64.396	Dipodomys_ordii
ENSLACG00000017338	RPUSD2	97	45.513	FBgn0051719	RluA-1	62	45.513	Drosophila_melanogaster
ENSLACG00000017338	RPUSD2	96	48.182	FBgn0032256	RluA-2	77	48.182	Drosophila_melanogaster
ENSLACG00000017338	RPUSD2	100	64.035	ENSETEG00000008581	RPUSD2	81	64.035	Echinops_telfairi
ENSLACG00000017338	RPUSD2	96	34.452	ENSEBUG00000012149	rpusd2	83	34.452	Eptatretus_burgeri
ENSLACG00000017338	RPUSD2	100	64.488	ENSEASG00005016463	RPUSD2	78	64.488	Equus_asinus_asinus
ENSLACG00000017338	RPUSD2	100	64.847	ENSECAG00000024178	RPUSD2	78	64.847	Equus_caballus
ENSLACG00000017338	RPUSD2	99	55.824	ENSEEUG00000005132	RPUSD2	82	55.824	Erinaceus_europaeus
ENSLACG00000017338	RPUSD2	100	62.069	ENSELUG00000016786	rpusd2	81	62.069	Esox_lucius
ENSLACG00000017338	RPUSD2	100	65.351	ENSFCAG00000040796	RPUSD2	79	65.351	Felis_catus
ENSLACG00000017338	RPUSD2	99	63.420	ENSFALG00000001122	RPUSD2	95	63.597	Ficedula_albicollis
ENSLACG00000017338	RPUSD2	100	64.254	ENSFDAG00000003070	RPUSD2	85	64.254	Fukomys_damarensis
ENSLACG00000017338	RPUSD2	99	59.300	ENSFHEG00000007518	rpusd2	80	59.300	Fundulus_heteroclitus
ENSLACG00000017338	RPUSD2	99	59.259	ENSGMOG00000011014	rpusd2	91	59.259	Gadus_morhua
ENSLACG00000017338	RPUSD2	99	66.449	ENSGALG00000041216	RPUSD2	92	66.449	Gallus_gallus
ENSLACG00000017338	RPUSD2	99	59.121	ENSGAFG00000003390	rpusd2	77	59.121	Gambusia_affinis
ENSLACG00000017338	RPUSD2	99	59.477	ENSGACG00000008656	rpusd2	87	59.477	Gasterosteus_aculeatus
ENSLACG00000017338	RPUSD2	99	68.352	ENSGAGG00000013098	RPUSD2	84	68.352	Gopherus_agassizii
ENSLACG00000017338	RPUSD2	100	64.565	ENSGGOG00000006684	RPUSD2	80	64.565	Gorilla_gorilla
ENSLACG00000017338	RPUSD2	99	58.531	ENSHBUG00000023777	rpusd2	79	58.531	Haplochromis_burtoni
ENSLACG00000017338	RPUSD2	100	64.474	ENSHGLG00000012765	RPUSD2	80	64.474	Heterocephalus_glaber_female
ENSLACG00000017338	RPUSD2	100	64.474	ENSHGLG00100006653	RPUSD2	80	64.474	Heterocephalus_glaber_male
ENSLACG00000017338	RPUSD2	99	58.120	ENSHCOG00000015587	rpusd2	77	58.120	Hippocampus_comes
ENSLACG00000017338	RPUSD2	100	61.739	ENSIPUG00000021006	rpusd2	76	61.739	Ictalurus_punctatus
ENSLACG00000017338	RPUSD2	100	64.912	ENSSTOG00000025619	RPUSD2	79	64.912	Ictidomys_tridecemlineatus
ENSLACG00000017338	RPUSD2	100	63.596	ENSJJAG00000023160	Rpusd2	81	63.596	Jaculus_jaculus
ENSLACG00000017338	RPUSD2	99	60.000	ENSKMAG00000006618	rpusd2	78	60.000	Kryptolebias_marmoratus
ENSLACG00000017338	RPUSD2	99	59.615	ENSLBEG00000021571	rpusd2	79	59.615	Labrus_bergylta
ENSLACG00000017338	RPUSD2	100	63.816	ENSLOCG00000014755	rpusd2	88	63.816	Lepisosteus_oculatus
ENSLACG00000017338	RPUSD2	99	64.859	ENSLAFG00000015588	RPUSD2	82	64.859	Loxodonta_africana
ENSLACG00000017338	RPUSD2	100	64.565	ENSMFAG00000045062	RPUSD2	80	64.565	Macaca_fascicularis
ENSLACG00000017338	RPUSD2	100	64.565	ENSMMUG00000001483	RPUSD2	80	64.565	Macaca_mulatta
ENSLACG00000017338	RPUSD2	100	54.644	ENSMNEG00000041429	RPUSD2	80	54.644	Macaca_nemestrina
ENSLACG00000017338	RPUSD2	80	63.315	ENSMLEG00000036551	RPUSD2	81	63.315	Mandrillus_leucophaeus
ENSLACG00000017338	RPUSD2	99	59.499	ENSMAMG00000001077	rpusd2	78	59.499	Mastacembelus_armatus
ENSLACG00000017338	RPUSD2	99	58.531	ENSMZEG00005006947	rpusd2	87	58.531	Maylandia_zebra
ENSLACG00000017338	RPUSD2	99	66.593	ENSMGAG00000003058	RPUSD2	95	66.593	Meleagris_gallopavo
ENSLACG00000017338	RPUSD2	100	63.816	ENSMAUG00000020467	Rpusd2	78	63.816	Mesocricetus_auratus
ENSLACG00000017338	RPUSD2	100	64.551	ENSMICG00000028637	RPUSD2	80	64.551	Microcebus_murinus
ENSLACG00000017338	RPUSD2	100	64.629	ENSMOCG00000020061	Rpusd2	78	64.629	Microtus_ochrogaster
ENSLACG00000017338	RPUSD2	99	60.044	ENSMMOG00000012020	rpusd2	79	60.044	Mola_mola
ENSLACG00000017338	RPUSD2	100	66.667	ENSMODG00000000300	RPUSD2	80	66.667	Monodelphis_domestica
ENSLACG00000017338	RPUSD2	99	58.439	ENSMALG00000010024	rpusd2	79	58.439	Monopterus_albus
ENSLACG00000017338	RPUSD2	100	64.912	MGP_CAROLIEiJ_G0024130	Rpusd2	78	64.912	Mus_caroli
ENSLACG00000017338	RPUSD2	100	64.693	ENSMUSG00000027324	Rpusd2	78	64.693	Mus_musculus
ENSLACG00000017338	RPUSD2	100	64.912	MGP_PahariEiJ_G0025573	Rpusd2	78	64.912	Mus_pahari
ENSLACG00000017338	RPUSD2	100	64.693	MGP_SPRETEiJ_G0025046	Rpusd2	78	64.693	Mus_spretus
ENSLACG00000017338	RPUSD2	100	64.425	ENSMPUG00000008517	RPUSD2	79	64.425	Mustela_putorius_furo
ENSLACG00000017338	RPUSD2	100	64.912	ENSMLUG00000007971	RPUSD2	86	64.912	Myotis_lucifugus
ENSLACG00000017338	RPUSD2	100	64.114	ENSNGAG00000014126	Rpusd2	79	64.114	Nannospalax_galili
ENSLACG00000017338	RPUSD2	99	60.220	ENSNBRG00000010070	rpusd2	78	60.220	Neolamprologus_brichardi
ENSLACG00000017338	RPUSD2	100	64.254	ENSNLEG00000035735	RPUSD2	80	64.254	Nomascus_leucogenys
ENSLACG00000017338	RPUSD2	100	65.368	ENSMEUG00000008500	RPUSD2	83	65.368	Notamacropus_eugenii
ENSLACG00000017338	RPUSD2	100	64.035	ENSOPRG00000014177	-	80	64.035	Ochotona_princeps
ENSLACG00000017338	RPUSD2	100	65.132	ENSODEG00000017193	RPUSD2	81	65.132	Octodon_degus
ENSLACG00000017338	RPUSD2	99	60.220	ENSONIG00000020102	rpusd2	86	60.220	Oreochromis_niloticus
ENSLACG00000017338	RPUSD2	56	77.647	ENSOANG00000011262	-	99	77.647	Ornithorhynchus_anatinus
ENSLACG00000017338	RPUSD2	100	64.706	ENSOCUG00000015745	RPUSD2	77	64.706	Oryctolagus_cuniculus
ENSLACG00000017338	RPUSD2	99	58.442	ENSORLG00000015516	rpusd2	79	58.442	Oryzias_latipes
ENSLACG00000017338	RPUSD2	99	59.560	ENSORLG00020010533	rpusd2	79	59.560	Oryzias_latipes_hni
ENSLACG00000017338	RPUSD2	99	58.681	ENSORLG00015009206	rpusd2	79	58.681	Oryzias_latipes_hsok
ENSLACG00000017338	RPUSD2	99	60.000	ENSOMEG00000007355	rpusd2	72	60.000	Oryzias_melastigma
ENSLACG00000017338	RPUSD2	100	64.629	ENSOGAG00000004867	RPUSD2	83	64.629	Otolemur_garnettii
ENSLACG00000017338	RPUSD2	99	64.835	ENSOARG00000020235	RPUSD2	80	64.835	Ovis_aries
ENSLACG00000017338	RPUSD2	100	64.629	ENSPPAG00000032874	RPUSD2	80	64.629	Pan_paniscus
ENSLACG00000017338	RPUSD2	100	64.912	ENSPPRG00000010446	RPUSD2	80	64.912	Panthera_pardus
ENSLACG00000017338	RPUSD2	100	64.912	ENSPTIG00000013316	RPUSD2	80	64.912	Panthera_tigris_altaica
ENSLACG00000017338	RPUSD2	100	64.629	ENSPTRG00000006924	RPUSD2	80	64.629	Pan_troglodytes
ENSLACG00000017338	RPUSD2	100	64.130	ENSPANG00000019339	RPUSD2	80	64.130	Papio_anubis
ENSLACG00000017338	RPUSD2	100	57.647	ENSPKIG00000023017	rpusd2	76	57.647	Paramormyrops_kingsleyae
ENSLACG00000017338	RPUSD2	80	66.942	ENSPSIG00000012680	RPUSD2	99	66.942	Pelodiscus_sinensis
ENSLACG00000017338	RPUSD2	88	75.510	ENSPMGG00000018165	rpusd2	76	75.510	Periophthalmus_magnuspinnatus
ENSLACG00000017338	RPUSD2	99	64.396	ENSPEMG00000012878	Rpusd2	81	64.396	Peromyscus_maniculatus_bairdii
ENSLACG00000017338	RPUSD2	100	62.719	ENSPCIG00000023199	RPUSD2	79	64.254	Phascolarctos_cinereus
ENSLACG00000017338	RPUSD2	99	61.184	ENSPFOG00000006829	rpusd2	78	61.184	Poecilia_formosa
ENSLACG00000017338	RPUSD2	99	61.404	ENSPLAG00000022914	rpusd2	88	61.404	Poecilia_latipinna
ENSLACG00000017338	RPUSD2	99	61.184	ENSPMEG00000009835	rpusd2	88	61.184	Poecilia_mexicana
ENSLACG00000017338	RPUSD2	99	60.746	ENSPREG00000016441	rpusd2	75	60.746	Poecilia_reticulata
ENSLACG00000017338	RPUSD2	100	65.652	ENSPPYG00000006355	RPUSD2	80	65.652	Pongo_abelii
ENSLACG00000017338	RPUSD2	100	63.816	ENSPCOG00000028019	RPUSD2	80	63.816	Propithecus_coquereli
ENSLACG00000017338	RPUSD2	100	64.270	ENSPVAG00000001837	RPUSD2	80	64.270	Pteropus_vampyrus
ENSLACG00000017338	RPUSD2	99	59.780	ENSPNYG00000021507	rpusd2	85	59.780	Pundamilia_nyererei
ENSLACG00000017338	RPUSD2	100	63.816	ENSRNOG00000010528	LOC100911166	78	63.816	Rattus_norvegicus
ENSLACG00000017338	RPUSD2	100	63.816	ENSRNOG00000046797	Rpusd2	78	63.816	Rattus_norvegicus
ENSLACG00000017338	RPUSD2	100	64.565	ENSRBIG00000030813	RPUSD2	80	64.565	Rhinopithecus_bieti
ENSLACG00000017338	RPUSD2	100	64.348	ENSRROG00000026664	RPUSD2	80	64.348	Rhinopithecus_roxellana
ENSLACG00000017338	RPUSD2	59	44.565	YDL036C	-	59	44.565	Saccharomyces_cerevisiae
ENSLACG00000017338	RPUSD2	100	64.912	ENSSBOG00000035031	RPUSD2	80	64.912	Saimiri_boliviensis_boliviensis
ENSLACG00000017338	RPUSD2	82	61.008	ENSSHAG00000015108	RPUSD2	94	61.008	Sarcophilus_harrisii
ENSLACG00000017338	RPUSD2	99	55.556	ENSSFOG00015019057	rpusd2	76	55.556	Scleropages_formosus
ENSLACG00000017338	RPUSD2	99	59.565	ENSSMAG00000000903	rpusd2	87	59.565	Scophthalmus_maximus
ENSLACG00000017338	RPUSD2	99	58.491	ENSSDUG00000019139	rpusd2	79	58.491	Seriola_dumerili
ENSLACG00000017338	RPUSD2	99	57.438	ENSSLDG00000005938	rpusd2	79	57.438	Seriola_lalandi_dorsalis
ENSLACG00000017338	RPUSD2	99	65.495	ENSSARG00000002792	RPUSD2	80	65.495	Sorex_araneus
ENSLACG00000017338	RPUSD2	99	66.522	ENSSPUG00000001206	RPUSD2	87	66.522	Sphenodon_punctatus
ENSLACG00000017338	RPUSD2	99	59.868	ENSSPAG00000003578	rpusd2	79	59.868	Stegastes_partitus
ENSLACG00000017338	RPUSD2	99	64.474	ENSSSCG00000036700	RPUSD2	79	64.474	Sus_scrofa
ENSLACG00000017338	RPUSD2	99	57.447	ENSTRUG00000025880	rpusd2	87	57.684	Takifugu_rubripes
ENSLACG00000017338	RPUSD2	99	59.081	ENSTNIG00000017329	rpusd2	88	59.081	Tetraodon_nigroviridis
ENSLACG00000017338	RPUSD2	100	57.018	ENSTBEG00000007933	RPUSD2	80	57.018	Tupaia_belangeri
ENSLACG00000017338	RPUSD2	100	65.570	ENSTTRG00000010585	RPUSD2	80	65.570	Tursiops_truncatus
ENSLACG00000017338	RPUSD2	100	64.254	ENSUAMG00000001470	RPUSD2	85	64.254	Ursus_americanus
ENSLACG00000017338	RPUSD2	100	64.254	ENSUMAG00000012487	RPUSD2	70	64.254	Ursus_maritimus
ENSLACG00000017338	RPUSD2	100	65.132	ENSVPAG00000003844	RPUSD2	80	65.132	Vicugna_pacos
ENSLACG00000017338	RPUSD2	100	65.132	ENSVVUG00000026590	RPUSD2	79	65.132	Vulpes_vulpes
ENSLACG00000017338	RPUSD2	100	66.083	ENSXETG00000015973	rpusd2	95	66.083	Xenopus_tropicalis
ENSLACG00000017338	RPUSD2	99	58.901	ENSXMAG00000021821	rpusd2	88	58.901	Xiphophorus_maculatus