EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000017463 (Gene tree)
Gene ID: -
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 50317 bases
Position: chrJH126704.1:2119452-2169768
Accession: 102363649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019863	SAP	PF02037.27	5.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020001	HNRNPU-201	7343	XM_005992939	ENSLACP00000019863	786 (aa)	-	H3BD92

Gene Model

Click here to download ENSLACG00000017463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000017463	HNRNPU	82	42.857	ENSLACG00000018039	HNRNPUL1	70	44.444
ENSLACG00000017463	HNRNPU	92	40.811	ENSLACG00000009304	-	73	43.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017463	HNRNPU	99	62.392	ENSG00000153187	HNRNPU	100	94.118	Homo_sapiens
ENSLACG00000017463	HNRNPU	99	44.898	ENSAPOG00000017400	hnrnpub	99	46.582	Acanthochromis_polyacanthus
ENSLACG00000017463	HNRNPU	99	61.372	ENSAMEG00000009145	HNRNPU	99	61.669	Ailuropoda_melanoleuca
ENSLACG00000017463	HNRNPU	86	58.228	ENSACIG00000012138	hnrnpub	89	80.435	Amphilophus_citrinellus
ENSLACG00000017463	HNRNPU	99	46.821	ENSAOCG00000015843	hnrnpub	99	46.698	Amphiprion_ocellaris
ENSLACG00000017463	HNRNPU	99	46.821	ENSAPEG00000014679	hnrnpub	99	46.698	Amphiprion_percula
ENSLACG00000017463	HNRNPU	95	49.421	ENSATEG00000016178	hnrnpub	85	50.460	Anabas_testudineus
ENSLACG00000017463	HNRNPU	77	68.239	ENSACAG00000004511	HNRNPU	99	58.740	Anolis_carolinensis
ENSLACG00000017463	HNRNPU	99	62.811	ENSANAG00000033895	-	99	63.321	Aotus_nancymaae
ENSLACG00000017463	HNRNPU	80	82.609	ENSACLG00000008165	hnrnpub	99	50.850	Astatotilapia_calliptera
ENSLACG00000017463	HNRNPU	99	60.192	ENSBTAG00000007606	HNRNPU	99	61.391	Bos_taurus
ENSLACG00000017463	HNRNPU	83	68.000	ENSCJAG00000016914	HNRNPU	99	60.885	Callithrix_jacchus
ENSLACG00000017463	HNRNPU	99	62.515	ENSCAFG00020000918	HNRNPU	99	62.808	Canis_lupus_dingo
ENSLACG00000017463	HNRNPU	99	62.299	ENSCHIG00000004900	HNRNPU	99	62.654	Capra_hircus
ENSLACG00000017463	HNRNPU	74	70.569	ENSCPOG00000011887	HNRNPU	72	71.262	Cavia_porcellus
ENSLACG00000017463	HNRNPU	99	62.687	ENSCCAG00000037859	-	99	63.197	Cebus_capucinus
ENSLACG00000017463	HNRNPU	99	62.935	ENSCATG00000035273	HNRNPU	99	62.716	Cercocebus_atys
ENSLACG00000017463	HNRNPU	74	70.569	ENSCLAG00000007100	HNRNPU	99	61.566	Chinchilla_lanigera
ENSLACG00000017463	HNRNPU	99	62.269	ENSCSAG00000009219	HNRNPU	99	62.408	Chlorocebus_sabaeus
ENSLACG00000017463	HNRNPU	80	78.947	ENSCHOG00000001387	HNRNPU	78	78.947	Choloepus_hoffmanni
ENSLACG00000017463	HNRNPU	74	68.053	ENSCPBG00000009415	HNRNPU	99	58.045	Chrysemys_picta_bellii
ENSLACG00000017463	HNRNPU	99	63.308	ENSCANG00000022780	HNRNPU	99	62.840	Colobus_angolensis_palliatus
ENSLACG00000017463	HNRNPU	99	62.313	ENSCGRG00001020525	Hnrnpu	99	61.993	Cricetulus_griseus_chok1gshd
ENSLACG00000017463	HNRNPU	74	70.175	ENSCSEG00000010804	hnrnpub	96	54.310	Cynoglossus_semilaevis
ENSLACG00000017463	HNRNPU	81	67.857	ENSCVAG00000004280	hnrnpub	93	67.857	Cyprinodon_variegatus
ENSLACG00000017463	HNRNPU	72	53.984	ENSDARG00000015206	hnrnpua	82	53.503	Danio_rerio
ENSLACG00000017463	HNRNPU	99	48.481	ENSDARG00000004735	hnrnpub	99	47.417	Danio_rerio
ENSLACG00000017463	HNRNPU	79	90.909	ENSDNOG00000000215	HNRNPU	88	89.583	Dasypus_novemcinctus
ENSLACG00000017463	HNRNPU	99	62.252	ENSDORG00000015491	Hnrnpu	99	62.593	Dipodomys_ordii
ENSLACG00000017463	HNRNPU	99	61.434	ENSETEG00000014565	HNRNPU	99	62.162	Echinops_telfairi
ENSLACG00000017463	HNRNPU	99	62.176	ENSEASG00005003017	HNRNPU	99	62.438	Equus_asinus_asinus
ENSLACG00000017463	HNRNPU	99	62.022	ENSECAG00000007955	HNRNPU	99	62.315	Equus_caballus
ENSLACG00000017463	HNRNPU	99	51.192	ENSELUG00000011966	hnrnpua	99	50.000	Esox_lucius
ENSLACG00000017463	HNRNPU	99	45.973	ENSELUG00000010733	hnrnpub	99	47.032	Esox_lucius
ENSLACG00000017463	HNRNPU	99	62.531	ENSFCAG00000002156	HNRNPU	99	62.639	Felis_catus
ENSLACG00000017463	HNRNPU	86	70.333	ENSFDAG00000006026	HNRNPU	99	77.193	Fukomys_damarensis
ENSLACG00000017463	HNRNPU	80	67.857	ENSFHEG00000022639	hnrnpub	90	67.857	Fundulus_heteroclitus
ENSLACG00000017463	HNRNPU	74	51.274	ENSGMOG00000001755	hnrnpub	99	47.073	Gadus_morhua
ENSLACG00000017463	HNRNPU	74	68.060	ENSGALG00000010671	HNRNPU	99	57.295	Gallus_gallus
ENSLACG00000017463	HNRNPU	72	60.300	ENSGAFG00000009369	hnrnpub	99	46.682	Gambusia_affinis
ENSLACG00000017463	HNRNPU	80	51.754	ENSGACG00000004679	hnrnpub	99	49.176	Gasterosteus_aculeatus
ENSLACG00000017463	HNRNPU	99	63.184	ENSGGOG00000004061	HNRNPU	99	62.963	Gorilla_gorilla
ENSLACG00000017463	HNRNPU	80	82.609	ENSHBUG00000012290	hnrnpub	81	52.968	Haplochromis_burtoni
ENSLACG00000017463	HNRNPU	99	62.624	ENSHGLG00000010594	-	99	62.593	Heterocephalus_glaber_female
ENSLACG00000017463	HNRNPU	82	70.769	ENSHGLG00100015093	HNRNPU	99	77.193	Heterocephalus_glaber_male
ENSLACG00000017463	HNRNPU	74	49.551	ENSHCOG00000020091	hnrnpub	80	50.901	Hippocampus_comes
ENSLACG00000017463	HNRNPU	77	80.000	ENSIPUG00000007749	hnrnpu	95	74.074	Ictalurus_punctatus
ENSLACG00000017463	HNRNPU	99	60.843	ENSJJAG00000011371	Hnrnpu	99	61.427	Jaculus_jaculus
ENSLACG00000017463	HNRNPU	97	53.523	ENSKMAG00000004532	hnrnpub	99	46.445	Kryptolebias_marmoratus
ENSLACG00000017463	HNRNPU	83	58.512	ENSLOCG00000016652	hnrnpua	78	61.538	Lepisosteus_oculatus
ENSLACG00000017463	HNRNPU	99	62.438	ENSLAFG00000021377	HNRNPU	99	62.593	Loxodonta_africana
ENSLACG00000017463	HNRNPU	99	62.935	ENSMFAG00000037308	HNRNPU	99	62.716	Macaca_fascicularis
ENSLACG00000017463	HNRNPU	99	62.935	ENSMMUG00000021098	HNRNPU	99	62.408	Macaca_mulatta
ENSLACG00000017463	HNRNPU	99	62.935	ENSMNEG00000043645	HNRNPU	99	62.716	Macaca_nemestrina
ENSLACG00000017463	HNRNPU	74	52.489	ENSMAMG00000007196	hnrnpub	99	46.482	Mastacembelus_armatus
ENSLACG00000017463	HNRNPU	80	82.609	ENSMZEG00005003185	hnrnpub	99	50.971	Maylandia_zebra
ENSLACG00000017463	HNRNPU	99	62.189	ENSMAUG00000008842	Hnrnpu	99	61.993	Mesocricetus_auratus
ENSLACG00000017463	HNRNPU	99	63.060	ENSMICG00000004616	HNRNPU	99	63.086	Microcebus_murinus
ENSLACG00000017463	HNRNPU	99	62.189	ENSMOCG00000015623	Hnrnpu	99	61.993	Microtus_ochrogaster
ENSLACG00000017463	HNRNPU	74	68.412	ENSMODG00000006515	HNRNPU	99	59.463	Monodelphis_domestica
ENSLACG00000017463	HNRNPU	80	68.852	ENSMALG00000018243	hnrnpub	70	56.415	Monopterus_albus
ENSLACG00000017463	HNRNPU	99	62.236	MGP_CAROLIEiJ_G0014962	Hnrnpu	99	61.916	Mus_caroli
ENSLACG00000017463	HNRNPU	99	62.236	ENSMUSG00000039630	Hnrnpu	99	61.916	Mus_musculus
ENSLACG00000017463	HNRNPU	99	61.710	MGP_PahariEiJ_G0028193	Hnrnpu	99	61.595	Mus_pahari
ENSLACG00000017463	HNRNPU	99	62.236	MGP_SPRETEiJ_G0015761	Hnrnpu	99	61.916	Mus_spretus
ENSLACG00000017463	HNRNPU	74	70.924	ENSMLUG00000000475	HNRNPU	74	70.764	Myotis_lucifugus
ENSLACG00000017463	HNRNPU	99	62.687	ENSNGAG00000019075	Hnrnpu	99	62.454	Nannospalax_galili
ENSLACG00000017463	HNRNPU	80	82.609	ENSNBRG00000017855	hnrnpub	81	52.816	Neolamprologus_brichardi
ENSLACG00000017463	HNRNPU	71	65.217	ENSMEUG00000000541	HNRNPU	99	56.903	Notamacropus_eugenii
ENSLACG00000017463	HNRNPU	70	72.059	ENSODEG00000014458	-	99	72.059	Octodon_degus
ENSLACG00000017463	HNRNPU	80	82.609	ENSONIG00000001260	hnrnpub	91	82.609	Oreochromis_niloticus
ENSLACG00000017463	HNRNPU	97	60.736	ENSOCUG00000014469	HNRNPU	92	60.837	Oryctolagus_cuniculus
ENSLACG00000017463	HNRNPU	74	52.266	ENSORLG00015001190	hnrnpub	82	51.891	Oryzias_latipes_hsok
ENSLACG00000017463	HNRNPU	75	50.963	ENSOMEG00000014951	hnrnpub	83	52.246	Oryzias_melastigma
ENSLACG00000017463	HNRNPU	99	62.794	ENSOGAG00000014024	HNRNPU	99	62.654	Otolemur_garnettii
ENSLACG00000017463	HNRNPU	82	71.212	ENSOARG00000004985	HNRNPU	88	78.947	Ovis_aries
ENSLACG00000017463	HNRNPU	99	63.060	ENSPPAG00000038652	HNRNPU	99	62.840	Pan_paniscus
ENSLACG00000017463	HNRNPU	99	60.952	ENSPPRG00000002662	HNRNPU	99	61.492	Panthera_pardus
ENSLACG00000017463	HNRNPU	99	63.060	ENSPTRG00000002182	HNRNPU	99	62.840	Pan_troglodytes
ENSLACG00000017463	HNRNPU	99	62.935	ENSPANG00000011643	HNRNPU	99	62.716	Papio_anubis
ENSLACG00000017463	HNRNPU	99	51.716	ENSPKIG00000022332	hnrnpub	79	59.494	Paramormyrops_kingsleyae
ENSLACG00000017463	HNRNPU	75	57.680	ENSPKIG00000006885	hnrnpua	80	58.898	Paramormyrops_kingsleyae
ENSLACG00000017463	HNRNPU	98	60.198	ENSPCIG00000008657	HNRNPU	99	60.380	Phascolarctos_cinereus
ENSLACG00000017463	HNRNPU	78	71.698	ENSPFOG00000002908	hnrnpub	99	45.309	Poecilia_formosa
ENSLACG00000017463	HNRNPU	81	71.698	ENSPLAG00000004160	hnrnpub	99	44.851	Poecilia_latipinna
ENSLACG00000017463	HNRNPU	99	62.655	ENSPCOG00000018655	-	99	62.685	Propithecus_coquereli
ENSLACG00000017463	HNRNPU	99	61.881	ENSPCOG00000003883	-	99	60.613	Propithecus_coquereli
ENSLACG00000017463	HNRNPU	99	60.671	ENSPVAG00000002581	HNRNPU	99	61.271	Pteropus_vampyrus
ENSLACG00000017463	HNRNPU	80	82.609	ENSPNYG00000021642	hnrnpub	81	53.120	Pundamilia_nyererei
ENSLACG00000017463	HNRNPU	99	51.001	ENSPNAG00000001055	hnrnpub	80	56.966	Pygocentrus_nattereri
ENSLACG00000017463	HNRNPU	99	62.562	ENSRNOG00000033790	Hnrnpu	99	62.116	Rattus_norvegicus
ENSLACG00000017463	HNRNPU	99	63.060	ENSRBIG00000031519	HNRNPU	99	61.491	Rhinopithecus_bieti
ENSLACG00000017463	HNRNPU	99	63.119	ENSRROG00000041642	HNRNPU	99	62.408	Rhinopithecus_roxellana
ENSLACG00000017463	HNRNPU	99	52.650	ENSSFOG00015001124	hnrnpub	99	53.318	Scleropages_formosus
ENSLACG00000017463	HNRNPU	99	54.009	ENSSFOG00015019004	hnrnpu	99	53.486	Scleropages_formosus
ENSLACG00000017463	HNRNPU	74	48.813	ENSSMAG00000003607	hnrnpub	97	49.409	Scophthalmus_maximus
ENSLACG00000017463	HNRNPU	74	50.294	ENSSDUG00000005912	hnrnpub	99	46.720	Seriola_dumerili
ENSLACG00000017463	HNRNPU	74	50.147	ENSSLDG00000004899	hnrnpub	99	47.821	Seriola_lalandi_dorsalis
ENSLACG00000017463	HNRNPU	74	70.756	ENSSPUG00000011393	HNRNPU	99	60.706	Sphenodon_punctatus
ENSLACG00000017463	HNRNPU	99	50.376	ENSSPAG00000011853	hnrnpub	99	46.882	Stegastes_partitus
ENSLACG00000017463	HNRNPU	99	62.639	ENSSSCG00000010877	HNRNPU	99	62.531	Sus_scrofa
ENSLACG00000017463	HNRNPU	74	51.135	ENSTRUG00000007759	hnrnpub	82	50.595	Takifugu_rubripes
ENSLACG00000017463	HNRNPU	95	47.404	ENSTNIG00000009725	hnrnpub	92	73.913	Tetraodon_nigroviridis
ENSLACG00000017463	HNRNPU	99	62.935	ENSUAMG00000021120	HNRNPU	99	62.593	Ursus_americanus
ENSLACG00000017463	HNRNPU	99	60.494	ENSUMAG00000012322	HNRNPU	97	76.000	Ursus_maritimus
ENSLACG00000017463	HNRNPU	75	68.000	ENSVPAG00000010520	HNRNPU	83	78.947	Vicugna_pacos
ENSLACG00000017463	HNRNPU	99	62.515	ENSVVUG00000026524	HNRNPU	99	62.832	Vulpes_vulpes
ENSLACG00000017463	HNRNPU	99	58.293	ENSXETG00000011386	hnrnpu	100	59.777	Xenopus_tropicalis
ENSLACG00000017463	HNRNPU	79	70.909	ENSXMAG00000010356	hnrnpub	99	45.995	Xiphophorus_maculatus