EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017530 (Gene tree)
Gene ID: 102359214
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 102104 bases
Position: chrJH126680.1:2170213-2272316
Accession: 102359214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000019941	zf-C2H2_jaz	PF12171.8	2e-06	1	1
ENSLACP00000019942	zf-C2H2_jaz	PF12171.8	2.2e-06	1	1
ENSLACP00000019942	G-patch	PF01585.23	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020079	GPATCH8-201	7961	XM_005992220	ENSLACP00000019941	1411 (aa)	XP_005992283	H3BDH0
ENSLACT00000020080	GPATCH8-202	6711	XM_014486246	ENSLACP00000019942	1489 (aa)	XP_014341732	H3BDH1

Gene Model

Click here to download ENSLACG00000017530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017530	GPATCH8	55	56.568	ENSG00000186566	GPATCH8	93	95.000	Homo_sapiens
ENSLACG00000017530	GPATCH8	50	55.512	ENSAMEG00000018376	GPATCH8	51	55.852	Ailuropoda_melanoleuca
ENSLACG00000017530	GPATCH8	54	57.959	ENSAPLG00000003095	GPATCH8	99	62.591	Anas_platyrhynchos
ENSLACG00000017530	GPATCH8	100	59.465	ENSACAG00000012522	GPATCH8	100	60.602	Anolis_carolinensis
ENSLACG00000017530	GPATCH8	55	56.184	ENSANAG00000032773	GPATCH8	100	58.203	Aotus_nancymaae
ENSLACG00000017530	GPATCH8	55	56.235	ENSBTAG00000038316	GPATCH8	51	57.216	Bos_taurus
ENSLACG00000017530	GPATCH8	55	55.882	ENSCJAG00000009807	GPATCH8	100	57.980	Callithrix_jacchus
ENSLACG00000017530	GPATCH8	51	57.677	ENSCAFG00000014136	GPATCH8	51	58.291	Canis_familiaris
ENSLACG00000017530	GPATCH8	50	57.087	ENSCAFG00020009830	GPATCH8	51	57.717	Canis_lupus_dingo
ENSLACG00000017530	GPATCH8	54	55.024	ENSCHIG00000008962	GPATCH8	99	56.045	Capra_hircus
ENSLACG00000017530	GPATCH8	55	53.241	ENSTSYG00000033153	GPATCH8	54	55.322	Carlito_syrichta
ENSLACG00000017530	GPATCH8	55	56.184	ENSCCAG00000030686	GPATCH8	100	56.156	Cebus_capucinus
ENSLACG00000017530	GPATCH8	100	62.377	ENSCPBG00000008955	GPATCH8	56	59.123	Chrysemys_picta_bellii
ENSLACG00000017530	GPATCH8	55	56.401	ENSCGRG00001020210	Gpatch8	51	57.088	Cricetulus_griseus_chok1gshd
ENSLACG00000017530	GPATCH8	55	56.401	ENSCGRG00000017090	Gpatch8	51	57.088	Cricetulus_griseus_crigri
ENSLACG00000017530	GPATCH8	56	55.208	ENSDNOG00000005102	GPATCH8	51	56.516	Dasypus_novemcinctus
ENSLACG00000017530	GPATCH8	51	54.511	ENSETEG00000001325	GPATCH8	51	54.892	Echinops_telfairi
ENSLACG00000017530	GPATCH8	55	55.648	ENSFCAG00000043334	GPATCH8	52	58.163	Felis_catus
ENSLACG00000017530	GPATCH8	99	58.710	ENSFALG00000009554	GPATCH8	55	56.092	Ficedula_albicollis
ENSLACG00000017530	GPATCH8	100	57.004	ENSGALG00000041556	GPATCH8	98	56.490	Gallus_gallus
ENSLACG00000017530	GPATCH8	100	61.980	ENSGAGG00000008358	GPATCH8	56	58.837	Gopherus_agassizii
ENSLACG00000017530	GPATCH8	55	53.491	ENSGGOG00000013860	GPATCH8	100	54.286	Gorilla_gorilla
ENSLACG00000017530	GPATCH8	74	62.069	ENSHGLG00100010738	GPATCH8	93	61.684	Heterocephalus_glaber_male
ENSLACG00000017530	GPATCH8	54	56.599	ENSSTOG00000025022	GPATCH8	51	57.580	Ictidomys_tridecemlineatus
ENSLACG00000017530	GPATCH8	55	54.376	ENSJJAG00000017797	Gpatch8	51	56.138	Jaculus_jaculus
ENSLACG00000017530	GPATCH8	54	56.679	ENSLAFG00000032250	GPATCH8	99	53.272	Loxodonta_africana
ENSLACG00000017530	GPATCH8	55	56.039	ENSMAUG00000021770	Gpatch8	51	56.718	Mesocricetus_auratus
ENSLACG00000017530	GPATCH8	54	56.383	ENSMICG00000028586	GPATCH8	51	57.089	Microcebus_murinus
ENSLACG00000017530	GPATCH8	55	56.287	ENSMOCG00000001658	Gpatch8	52	56.892	Microtus_ochrogaster
ENSLACG00000017530	GPATCH8	100	58.858	ENSMODG00000011442	GPATCH8	51	58.003	Monodelphis_domestica
ENSLACG00000017530	GPATCH8	55	55.464	ENSMUSG00000034621	Gpatch8	51	57.088	Mus_musculus
ENSLACG00000017530	GPATCH8	54	55.662	MGP_SPRETEiJ_G0018098	Gpatch8	51	57.216	Mus_spretus
ENSLACG00000017530	GPATCH8	55	54.286	ENSMPUG00000009274	GPATCH8	51	55.980	Mustela_putorius_furo
ENSLACG00000017530	GPATCH8	61	80.392	ENSMLUG00000013840	GPATCH8	65	81.699	Myotis_lucifugus
ENSLACG00000017530	GPATCH8	55	54.417	ENSNGAG00000021860	Gpatch8	55	54.524	Nannospalax_galili
ENSLACG00000017530	GPATCH8	77	54.806	ENSMEUG00000011799	GPATCH8	66	53.189	Notamacropus_eugenii
ENSLACG00000017530	GPATCH8	100	53.408	ENSOPRG00000008816	GPATCH8	91	62.153	Ochotona_princeps
ENSLACG00000017530	GPATCH8	55	55.687	ENSOCUG00000003291	GPATCH8	100	56.372	Oryctolagus_cuniculus
ENSLACG00000017530	GPATCH8	100	56.063	ENSOGAG00000033643	GPATCH8	50	54.150	Otolemur_garnettii
ENSLACG00000017530	GPATCH8	54	55.981	ENSOARG00000008370	GPATCH8	100	52.021	Ovis_aries
ENSLACG00000017530	GPATCH8	55	56.537	ENSPPAG00000040523	GPATCH8	100	56.140	Pan_paniscus
ENSLACG00000017530	GPATCH8	55	54.935	ENSPPRG00000023310	GPATCH8	51	57.526	Panthera_pardus
ENSLACG00000017530	GPATCH8	55	54.935	ENSPTIG00000020001	GPATCH8	52	57.526	Panthera_tigris_altaica
ENSLACG00000017530	GPATCH8	55	56.537	ENSPTRG00000009278	GPATCH8	100	56.140	Pan_troglodytes
ENSLACG00000017530	GPATCH8	55	55.662	ENSPEMG00000008337	Gpatch8	51	56.777	Peromyscus_maniculatus_bairdii
ENSLACG00000017530	GPATCH8	55	55.910	ENSPPYG00000008329	GPATCH8	51	56.494	Pongo_abelii
ENSLACG00000017530	GPATCH8	64	95.690	ENSPCAG00000004441	GPATCH8	77	95.690	Procavia_capensis
ENSLACG00000017530	GPATCH8	54	53.855	ENSPCOG00000019209	GPATCH8	50	54.188	Propithecus_coquereli
ENSLACG00000017530	GPATCH8	100	57.542	ENSPVAG00000003155	GPATCH8	100	56.177	Pteropus_vampyrus
ENSLACG00000017530	GPATCH8	55	55.948	ENSRNOG00000021044	Gpatch8	51	56.978	Rattus_norvegicus
ENSLACG00000017530	GPATCH8	55	56.302	ENSSBOG00000023544	GPATCH8	51	57.414	Saimiri_boliviensis_boliviensis
ENSLACG00000017530	GPATCH8	100	58.447	ENSSHAG00000016140	GPATCH8	51	57.417	Sarcophilus_harrisii
ENSLACG00000017530	GPATCH8	53	55.556	ENSSPUG00000011251	GPATCH8	100	59.091	Sphenodon_punctatus
ENSLACG00000017530	GPATCH8	51	57.362	ENSSSCG00000017357	ITGA2B	52	55.980	Sus_scrofa
ENSLACG00000017530	GPATCH8	73	71.479	ENSTBEG00000009486	GPATCH8	71	71.380	Tupaia_belangeri
ENSLACG00000017530	GPATCH8	54	54.337	ENSVPAG00000006937	GPATCH8	56	56.650	Vicugna_pacos
ENSLACG00000017530	GPATCH8	51	57.290	ENSVVUG00000017996	GPATCH8	51	57.908	Vulpes_vulpes