EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000017592 (Gene tree)
Gene ID: 102354411
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC102354411
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 15688 bases
Position: chrJH126703.1:2219569-2235256
Accession: 102354411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020012	Sua5_yciO_yrdC	PF01300.18	5.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020150	-	2505	XM_005992907	ENSLACP00000020012	835 (aa)	XP_005992969	H3BDP1

Gene Model

Click here to download ENSLACG00000017592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000017592	si:ch211-153b23.4	74	31.505	ENSLACG00000005800	-	76	31.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017592	si:ch211-153b23.4	91	64.398	ENSAPOG00000006144	si:ch211-153b23.4	89	64.398	Acanthochromis_polyacanthus
ENSLACG00000017592	si:ch211-153b23.4	99	61.853	ENSAPOG00000006178	si:ch211-153b23.4	94	61.853	Acanthochromis_polyacanthus
ENSLACG00000017592	si:ch211-153b23.4	94	65.696	ENSACIG00000006997	si:ch211-153b23.4	92	65.696	Amphilophus_citrinellus
ENSLACG00000017592	si:ch211-153b23.4	93	62.179	ENSAOCG00000010999	si:ch211-153b23.4	94	62.179	Amphiprion_ocellaris
ENSLACG00000017592	si:ch211-153b23.4	95	62.657	ENSAPEG00000014665	si:ch211-153b23.4	93	62.657	Amphiprion_percula
ENSLACG00000017592	si:ch211-153b23.4	99	65.655	ENSATEG00000004948	si:ch211-153b23.4	93	65.655	Anabas_testudineus
ENSLACG00000017592	si:ch211-153b23.4	99	70.424	ENSAPLG00000013596	-	99	70.424	Anas_platyrhynchos
ENSLACG00000017592	si:ch211-153b23.4	98	63.415	ENSACLG00000005471	si:ch211-153b23.4	92	63.415	Astatotilapia_calliptera
ENSLACG00000017592	si:ch211-153b23.4	97	64.865	ENSAMXG00000013879	si:ch211-153b23.4	95	64.865	Astyanax_mexicanus
ENSLACG00000017592	si:ch211-153b23.4	99	61.064	ENSCSEG00000014838	si:ch211-153b23.4	98	61.064	Cynoglossus_semilaevis
ENSLACG00000017592	si:ch211-153b23.4	96	63.896	ENSCVAG00000021145	si:ch211-153b23.4	99	63.896	Cyprinodon_variegatus
ENSLACG00000017592	si:ch211-153b23.4	98	62.409	ENSDARG00000077169	si:ch211-153b23.4	93	62.136	Danio_rerio
ENSLACG00000017592	si:ch211-153b23.4	51	36.927	ENSDARG00000104919	si:ch211-153b23.3	50	36.927	Danio_rerio
ENSLACG00000017592	si:ch211-153b23.4	99	62.485	ENSELUG00000004961	si:ch211-153b23.4	93	61.520	Esox_lucius
ENSLACG00000017592	si:ch211-153b23.4	98	63.370	ENSFALG00000011343	-	94	63.370	Ficedula_albicollis
ENSLACG00000017592	si:ch211-153b23.4	96	63.772	ENSFHEG00000010001	si:ch211-153b23.4	100	63.772	Fundulus_heteroclitus
ENSLACG00000017592	si:ch211-153b23.4	84	79.474	ENSFHEG00000009888	si:ch211-153b23.4	77	79.474	Fundulus_heteroclitus
ENSLACG00000017592	si:ch211-153b23.4	56	35.611	ENSFHEG00000010030	si:ch211-153b23.3	53	35.611	Fundulus_heteroclitus
ENSLACG00000017592	si:ch211-153b23.4	94	62.197	ENSGAFG00000007442	si:ch211-153b23.4	93	62.197	Gambusia_affinis
ENSLACG00000017592	si:ch211-153b23.4	98	65.122	ENSGACG00000018253	si:ch211-153b23.4	96	65.122	Gasterosteus_aculeatus
ENSLACG00000017592	si:ch211-153b23.4	83	73.121	ENSGAGG00000024601	-	93	73.121	Gopherus_agassizii
ENSLACG00000017592	si:ch211-153b23.4	80	64.414	ENSHBUG00000000013	si:ch211-153b23.4	88	64.414	Haplochromis_burtoni
ENSLACG00000017592	si:ch211-153b23.4	100	63.321	ENSIPUG00000015205	si:ch211-153b23.4	99	63.321	Ictalurus_punctatus
ENSLACG00000017592	si:ch211-153b23.4	56	35.565	ENSIPUG00000015213	si:ch211-153b23.3	54	35.699	Ictalurus_punctatus
ENSLACG00000017592	si:ch211-153b23.4	99	63.789	ENSKMAG00000006919	-	94	63.789	Kryptolebias_marmoratus
ENSLACG00000017592	si:ch211-153b23.4	98	63.814	ENSKMAG00000006829	si:ch211-153b23.4	99	63.814	Kryptolebias_marmoratus
ENSLACG00000017592	si:ch211-153b23.4	99	64.010	ENSLBEG00000026309	si:ch211-153b23.4	94	64.010	Labrus_bergylta
ENSLACG00000017592	si:ch211-153b23.4	95	65.288	ENSMAMG00000009277	si:ch211-153b23.4	95	65.288	Mastacembelus_armatus
ENSLACG00000017592	si:ch211-153b23.4	96	64.764	ENSMAMG00000009358	si:ch211-153b23.4	98	64.764	Mastacembelus_armatus
ENSLACG00000017592	si:ch211-153b23.4	96	62.903	ENSMZEG00005011433	si:ch211-153b23.4	98	62.903	Maylandia_zebra
ENSLACG00000017592	si:ch211-153b23.4	99	70.960	ENSMGAG00000005478	-	99	70.960	Meleagris_gallopavo
ENSLACG00000017592	si:ch211-153b23.4	96	62.903	ENSMMOG00000004425	si:ch211-153b23.4	99	62.903	Mola_mola
ENSLACG00000017592	si:ch211-153b23.4	96	62.718	ENSNBRG00000013392	si:ch211-153b23.4	100	62.718	Neolamprologus_brichardi
ENSLACG00000017592	si:ch211-153b23.4	98	63.183	ENSONIG00000017875	si:ch211-153b23.4	94	63.183	Oreochromis_niloticus
ENSLACG00000017592	si:ch211-153b23.4	98	63.196	ENSORLG00000006169	si:ch211-153b23.4	93	63.305	Oryzias_latipes
ENSLACG00000017592	si:ch211-153b23.4	98	63.196	ENSORLG00020009905	si:ch211-153b23.4	93	63.305	Oryzias_latipes_hni
ENSLACG00000017592	si:ch211-153b23.4	71	31.922	ENSORLG00015003698	si:ch211-153b23.3	72	32.190	Oryzias_latipes_hsok
ENSLACG00000017592	si:ch211-153b23.4	98	63.075	ENSORLG00015003709	si:ch211-153b23.4	93	63.183	Oryzias_latipes_hsok
ENSLACG00000017592	si:ch211-153b23.4	98	64.277	ENSOMEG00000007682	si:ch211-153b23.4	93	63.305	Oryzias_melastigma
ENSLACG00000017592	si:ch211-153b23.4	74	32.445	ENSOMEG00000007661	si:ch211-153b23.3	72	32.445	Oryzias_melastigma
ENSLACG00000017592	si:ch211-153b23.4	99	64.536	ENSPKIG00000025681	si:ch211-153b23.4	96	64.536	Paramormyrops_kingsleyae
ENSLACG00000017592	si:ch211-153b23.4	53	36.184	ENSPKIG00000022450	si:ch211-153b23.3	53	36.184	Paramormyrops_kingsleyae
ENSLACG00000017592	si:ch211-153b23.4	99	64.493	ENSPKIG00000014429	si:ch211-153b23.4	95	64.500	Paramormyrops_kingsleyae
ENSLACG00000017592	si:ch211-153b23.4	94	55.711	ENSPMGG00000001313	si:ch211-153b23.4	87	55.980	Periophthalmus_magnuspinnatus
ENSLACG00000017592	si:ch211-153b23.4	85	64.017	ENSPFOG00000012164	si:ch211-153b23.4	100	64.017	Poecilia_formosa
ENSLACG00000017592	si:ch211-153b23.4	62	35.206	ENSPFOG00000012289	si:ch211-153b23.3	54	35.892	Poecilia_formosa
ENSLACG00000017592	si:ch211-153b23.4	96	63.524	ENSPLAG00000016295	si:ch211-153b23.4	99	63.524	Poecilia_latipinna
ENSLACG00000017592	si:ch211-153b23.4	93	62.996	ENSPMEG00000007538	si:ch211-153b23.4	97	62.829	Poecilia_mexicana
ENSLACG00000017592	si:ch211-153b23.4	96	62.655	ENSPNYG00000000250	si:ch211-153b23.4	98	62.655	Pundamilia_nyererei
ENSLACG00000017592	si:ch211-153b23.4	100	64.636	ENSPNAG00000019554	si:ch211-153b23.4	94	64.636	Pygocentrus_nattereri
ENSLACG00000017592	si:ch211-153b23.4	99	65.357	ENSSFOG00015003920	-	95	65.238	Scleropages_formosus
ENSLACG00000017592	si:ch211-153b23.4	74	32.500	ENSSFOG00015010910	si:ch211-153b23.3	72	32.500	Scleropages_formosus
ENSLACG00000017592	si:ch211-153b23.4	99	65.707	ENSSFOG00015010891	si:ch211-153b23.4	95	65.707	Scleropages_formosus
ENSLACG00000017592	si:ch211-153b23.4	98	63.913	ENSSMAG00000010067	si:ch211-153b23.4	95	63.913	Scophthalmus_maximus
ENSLACG00000017592	si:ch211-153b23.4	80	62.481	ENSSDUG00000006931	si:ch211-153b23.4	91	62.481	Seriola_dumerili
ENSLACG00000017592	si:ch211-153b23.4	96	64.888	ENSSDUG00000006671	si:ch211-153b23.4	99	64.764	Seriola_dumerili
ENSLACG00000017592	si:ch211-153b23.4	82	74.340	ENSSDUG00000006842	si:ch211-153b23.4	84	74.340	Seriola_dumerili
ENSLACG00000017592	si:ch211-153b23.4	53	36.681	ENSSLDG00000008629	si:ch211-153b23.3	51	36.681	Seriola_lalandi_dorsalis
ENSLACG00000017592	si:ch211-153b23.4	98	68.093	ENSTGUG00000005499	-	99	68.093	Taeniopygia_guttata
ENSLACG00000017592	si:ch211-153b23.4	96	63.445	ENSTRUG00000003247	si:ch211-153b23.4	99	63.445	Takifugu_rubripes
ENSLACG00000017592	si:ch211-153b23.4	99	61.306	ENSTNIG00000008958	si:ch211-153b23.4	99	61.306	Tetraodon_nigroviridis
ENSLACG00000017592	si:ch211-153b23.4	99	62.456	ENSXETG00000004489	-	93	62.456	Xenopus_tropicalis
ENSLACG00000017592	si:ch211-153b23.4	96	63.296	ENSXMAG00000021388	si:ch211-153b23.4	98	63.337	Xiphophorus_maculatus
ENSLACG00000017592	si:ch211-153b23.4	97	63.041	ENSXMAG00000009416	-	95	63.041	Xiphophorus_maculatus