Description
Ensembl ID
ENSLACG00000017611 (Gene tree)
Gene ID
102353166
Gene Symbol
DDB1
Alias
-
Full Name
damage specific DNA binding protein 1
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
45355 bases
Position
chrJH126580.1:2229172-2274526
Accession
102353166
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSLACP00000020033CPSF_APF03178.155.1e-8511
ENSLACP00000020034CPSF_APF03178.159.1e-7811
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSLACT00000020171DDB1-2013429XM_005987986ENSLACP000000200331142 (aa)XP_005988048H3BDR2
ENSLACT00000020172DDB1-2023723-ENSLACP000000200341090 (aa)-H3BDR3
Pathways
Pathway ID
Pathway Name
Source
lcm03420Nucleotide excision repairKEGG
lcm04120Ubiquitin mediated proteolysisKEGG
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSLACG00000017611DDB110093.520ENSG00000167986DDB110096.364Homo_sapiens
ENSLACG00000017611DDB19890.771ENSAPOG00000005036ddb19991.327Acanthochromis_polyacanthus
ENSLACG00000017611DDB110093.608ENSAMEG00000016518DDB110093.608Ailuropoda_melanoleuca
ENSLACG00000017611DDB18891.250ENSACIG00000020624ddb19991.327Amphilophus_citrinellus
ENSLACG00000017611DDB110090.806ENSAOCG00000003066ddb110090.806Amphiprion_ocellaris
ENSLACG00000017611DDB110090.893ENSAPEG00000000092ddb110090.893Amphiprion_percula
ENSLACG00000017611DDB19790.746ENSATEG00000020571ddb19791.240Anabas_testudineus
ENSLACG00000017611DDB19993.015ENSAPLG00000007174DDB19993.015Anas_platyrhynchos
ENSLACG00000017611DDB110093.608ENSACAG00000017758DDB110093.608Anolis_carolinensis
ENSLACG00000017611DDB110093.520ENSANAG00000021878DDB110093.520Aotus_nancymaae
ENSLACG00000017611DDB110090.981ENSACLG00000012401ddb110090.981Astatotilapia_calliptera
ENSLACG00000017611DDB110093.520ENSBTAG00000021569DDB19393.520Bos_taurus
ENSLACG00000017611DDB110037.148WBGene00010890ddb-110037.148Caenorhabditis_elegans
ENSLACG00000017611DDB110093.520ENSCJAG00000019319DDB110093.520Callithrix_jacchus
ENSLACG00000017611DDB110093.608ENSCAFG00000016264DDB110093.608Canis_familiaris
ENSLACG00000017611DDB19793.661ENSCAFG00020012722DDB19993.756Canis_lupus_dingo
ENSLACG00000017611DDB110093.520ENSCHIG00000014969DDB110093.520Capra_hircus
ENSLACG00000017611DDB110093.170ENSTSYG00000008027DDB110093.170Carlito_syrichta
ENSLACG00000017611DDB19893.310ENSCAPG00000010786DDB110093.310Cavia_aperea
ENSLACG00000017611DDB110093.170ENSCPOG00000009956DDB110093.170Cavia_porcellus
ENSLACG00000017611DDB110093.520ENSCCAG00000035883DDB110093.520Cebus_capucinus
ENSLACG00000017611DDB110091.161ENSCATG00000044495DDB110091.161Cercocebus_atys
ENSLACG00000017611DDB110093.257ENSCLAG00000004126DDB110093.257Chinchilla_lanigera
ENSLACG00000017611DDB110093.520ENSCSAG00000006392DDB110093.520Chlorocebus_sabaeus
ENSLACG00000017611DDB18887.547ENSCHOG00000011377DDB19087.547Choloepus_hoffmanni
ENSLACG00000017611DDB110093.520ENSCPBG00000017728DDB110093.520Chrysemys_picta_bellii
ENSLACG00000017611DDB110061.872ENSCING00000007437-10061.872Ciona_intestinalis
ENSLACG00000017611DDB19460.148ENSCSAVG00000004783-10060.148Ciona_savignyi
ENSLACG00000017611DDB110093.520ENSCANG00000019948DDB110093.520Colobus_angolensis_palliatus
ENSLACG00000017611DDB110093.608ENSCGRG00001016599Ddb110093.608Cricetulus_griseus_chok1gshd
ENSLACG00000017611DDB110093.608ENSCGRG00000013427Ddb110093.608Cricetulus_griseus_crigri
ENSLACG00000017611DDB19690.874ENSCSEG00000012499ddb19989.575Cynoglossus_semilaevis
ENSLACG00000017611DDB19790.892ENSCVAG00000019531ddb19990.884Cyprinodon_variegatus
ENSLACG00000017611DDB110088.364ENSDARG00000074431ddb110088.482Danio_rerio
ENSLACG00000017611DDB19892.857ENSDNOG00000014884DDB19893.135Dasypus_novemcinctus
ENSLACG00000017611DDB18495.475ENSDORG00000000127Ddb110095.475Dipodomys_ordii
ENSLACG00000017611DDB110060.661FBgn0260962pic10060.593Drosophila_melanogaster
ENSLACG00000017611DDB17196.063ENSETEG00000001053-7196.063Echinops_telfairi
ENSLACG00000017611DDB18084.465ENSEBUG00000014593ddb19784.364Eptatretus_burgeri
ENSLACG00000017611DDB110093.433ENSEASG00005008184DDB110093.433Equus_asinus_asinus
ENSLACG00000017611DDB110093.433ENSECAG00000012136DDB110093.433Equus_caballus
ENSLACG00000017611DDB18590.404ENSEEUG00000003194DDB18590.404Erinaceus_europaeus
ENSLACG00000017611DDB110090.193ENSELUG00000023868ddb110090.193Esox_lucius
ENSLACG00000017611DDB110093.608ENSFCAG00000029716DDB110093.608Felis_catus
ENSLACG00000017611DDB110093.788ENSFALG00000011981DDB110093.788Ficedula_albicollis
ENSLACG00000017611DDB110093.345ENSFDAG00000005128DDB110093.345Fukomys_damarensis
ENSLACG00000017611DDB19090.272ENSFHEG00000022133ddb19990.272Fundulus_heteroclitus
ENSLACG00000017611DDB18294.314ENSGMOG00000019386ddb19494.314Gadus_morhua
ENSLACG00000017611DDB110093.695ENSGALG00000042333DDB110093.695Gallus_gallus
ENSLACG00000017611DDB19790.797ENSGAFG00000013142ddb19990.791Gambusia_affinis
ENSLACG00000017611DDB19790.427ENSGACG00000017182ddb110089.478Gasterosteus_aculeatus
ENSLACG00000017611DDB19593.738ENSGAGG00000014124DDB110093.738Gopherus_agassizii
ENSLACG00000017611DDB110093.520ENSGGOG00000004052DDB110093.520Gorilla_gorilla
ENSLACG00000017611DDB110090.981ENSHBUG00000008873ddb110090.981Haplochromis_burtoni
ENSLACG00000017611DDB110093.170ENSHGLG00000018430DDB110093.170Heterocephalus_glaber_female
ENSLACG00000017611DDB110092.294ENSHGLG00100014475DDB110092.294Heterocephalus_glaber_male
ENSLACG00000017611DDB19790.417ENSHCOG00000018670ddb19990.344Hippocampus_comes
ENSLACG00000017611DDB110090.368ENSIPUG00000005612DDB110090.368Ictalurus_punctatus
ENSLACG00000017611DDB110093.608ENSSTOG00000007552DDB110093.608Ictidomys_tridecemlineatus
ENSLACG00000017611DDB110093.433ENSJJAG00000017769Ddb110093.433Jaculus_jaculus
ENSLACG00000017611DDB19790.512ENSKMAG00000002315ddb19990.680Kryptolebias_marmoratus
ENSLACG00000017611DDB18890.862ENSLBEG00000017065ddb19990.881Labrus_bergylta
ENSLACG00000017611DDB19284.921ENSLOCG00000000012ddb110084.921Lepisosteus_oculatus
ENSLACG00000017611DDB110093.345ENSLAFG00000011513DDB110093.345Loxodonta_africana
ENSLACG00000017611DDB110093.520ENSMFAG00000042035DDB110093.520Macaca_fascicularis
ENSLACG00000017611DDB19993.557ENSMMUG00000002691DDB19993.557Macaca_mulatta
ENSLACG00000017611DDB110093.520ENSMNEG00000031559DDB110093.520Macaca_nemestrina
ENSLACG00000017611DDB110093.520ENSMLEG00000044136DDB110093.520Mandrillus_leucophaeus
ENSLACG00000017611DDB110090.806ENSMAMG00000014372ddb110090.806Mastacembelus_armatus
ENSLACG00000017611DDB110090.893ENSMZEG00005013835ddb110090.893Maylandia_zebra
ENSLACG00000017611DDB19493.855ENSMGAG00000004990DDB110093.855Meleagris_gallopavo
ENSLACG00000017611DDB110093.608ENSMAUG00000012926Ddb110093.608Mesocricetus_auratus
ENSLACG00000017611DDB110093.695ENSMICG00000013703DDB110093.695Microcebus_murinus
ENSLACG00000017611DDB110093.520ENSMOCG00000020499Ddb110093.520Microtus_ochrogaster
ENSLACG00000017611DDB18891.250ENSMMOG00000001758ddb19991.327Mola_mola
ENSLACG00000017611DDB110084.948ENSMODG00000020353DDB110084.948Monodelphis_domestica
ENSLACG00000017611DDB110090.806ENSMALG00000014071ddb110090.806Monopterus_albus
ENSLACG00000017611DDB110093.608MGP_CAROLIEiJ_G0022695Ddb110093.608Mus_caroli
ENSLACG00000017611DDB110093.520ENSMUSG00000024740Ddb110093.520Mus_musculus
ENSLACG00000017611DDB110093.608MGP_PahariEiJ_G0014189Ddb110093.608Mus_pahari
ENSLACG00000017611DDB110093.608MGP_SPRETEiJ_G0023609Ddb110093.608Mus_spretus
ENSLACG00000017611DDB110090.543ENSMPUG00000014200DDB110090.543Mustela_putorius_furo
ENSLACG00000017611DDB110093.433ENSMLUG00000013232DDB110093.433Myotis_lucifugus
ENSLACG00000017611DDB110093.695ENSNGAG00000009384Ddb110093.695Nannospalax_galili
ENSLACG00000017611DDB110091.068ENSNBRG00000019581ddb110091.068Neolamprologus_brichardi
ENSLACG00000017611DDB110090.728ENSNLEG00000002022DDB110090.728Nomascus_leucogenys
ENSLACG00000017611DDB19095.804ENSMEUG00000001099DDB19395.804Notamacropus_eugenii
ENSLACG00000017611DDB19085.479ENSOPRG00000008254DDB19085.479Ochotona_princeps
ENSLACG00000017611DDB110093.170ENSODEG00000002419DDB110093.170Octodon_degus
ENSLACG00000017611DDB110090.981ENSONIG00000005804ddb110090.981Oreochromis_niloticus
ENSLACG00000017611DDB19193.714ENSOANG00000004897DDB110093.714Ornithorhynchus_anatinus
ENSLACG00000017611DDB110093.695ENSOCUG00000001667DDB110093.695Oryctolagus_cuniculus
ENSLACG00000017611DDB19790.368ENSORLG00000001399ddb19890.970Oryzias_latipes
ENSLACG00000017611DDB19790.368ENSORLG00020001277ddb19590.867Oryzias_latipes_hni
ENSLACG00000017611DDB19790.207ENSORLG00015002080ddb19890.867Oryzias_latipes_hsok
ENSLACG00000017611DDB19790.987ENSOMEG00000006181ddb19790.901Oryzias_melastigma
ENSLACG00000017611DDB110093.695ENSOGAG00000016103DDB110093.695Otolemur_garnettii
ENSLACG00000017611DDB19993.600ENSOARG00000011716DDB19893.600Ovis_aries
ENSLACG00000017611DDB110093.520ENSPPAG00000035343DDB110093.520Pan_paniscus
ENSLACG00000017611DDB110093.608ENSPPRG00000013300DDB110093.608Panthera_pardus
ENSLACG00000017611DDB19893.756ENSPTIG00000006909DDB19893.756Panthera_tigris_altaica
ENSLACG00000017611DDB110093.520ENSPTRG00000003737DDB110093.520Pan_troglodytes
ENSLACG00000017611DDB110093.520ENSPANG00000000242DDB110093.520Papio_anubis
ENSLACG00000017611DDB19791.271ENSPKIG00000019213ddb19491.256Paramormyrops_kingsleyae
ENSLACG00000017611DDB19893.606ENSPSIG00000013275DDB110093.606Pelodiscus_sinensis
ENSLACG00000017611DDB18890.833ENSPMGG00000021179ddb19990.918Periophthalmus_magnuspinnatus
ENSLACG00000017611DDB110093.608ENSPEMG00000012241Ddb110093.608Peromyscus_maniculatus_bairdii
ENSLACG00000017611DDB19386.640ENSPMAG00000008479ddb110086.640Petromyzon_marinus
ENSLACG00000017611DDB110093.608ENSPCIG00000002643DDB110093.608Phascolarctos_cinereus
ENSLACG00000017611DDB110090.718ENSPFOG00000002768ddb110090.718Poecilia_formosa
ENSLACG00000017611DDB110090.455ENSPLAG00000017227ddb110090.455Poecilia_latipinna
ENSLACG00000017611DDB110090.455ENSPMEG00000011398ddb110090.455Poecilia_mexicana
ENSLACG00000017611DDB19790.892ENSPREG00000004440ddb19791.053Poecilia_reticulata
ENSLACG00000017611DDB110089.276ENSPPYG00000003193DDB110089.276Pongo_abelii
ENSLACG00000017611DDB18591.964ENSPCAG00000011040DDB18591.964Procavia_capensis
ENSLACG00000017611DDB110092.570ENSPCOG00000015176DDB110092.570Propithecus_coquereli
ENSLACG00000017611DDB110093.433ENSPVAG00000003847DDB110093.433Pteropus_vampyrus
ENSLACG00000017611DDB19790.987ENSPNAG00000006635ddb19790.977Pygocentrus_nattereri
ENSLACG00000017611DDB110093.520ENSRNOG00000020715Ddb110093.520Rattus_norvegicus
ENSLACG00000017611DDB110093.520ENSRBIG00000033611DDB110093.520Rhinopithecus_bieti
ENSLACG00000017611DDB110093.520ENSRROG00000041407DDB110093.520Rhinopithecus_roxellana
ENSLACG00000017611DDB110093.608ENSSBOG00000019775DDB110093.608Saimiri_boliviensis_boliviensis
ENSLACG00000017611DDB19491.791ENSSHAG00000011600DDB110091.791Sarcophilus_harrisii
ENSLACG00000017611DDB19791.651ENSSFOG00015011151ddb19691.799Scleropages_formosus
ENSLACG00000017611DDB110090.806ENSSMAG00000009495ddb110090.806Scophthalmus_maximus
ENSLACG00000017611DDB110090.718ENSSDUG00000004642ddb110090.718Seriola_dumerili
ENSLACG00000017611DDB110090.718ENSSLDG00000015804ddb110090.718Seriola_lalandi_dorsalis
ENSLACG00000017611DDB170100.000ENSSARG00000003290-72100.000Sorex_araneus
ENSLACG00000017611DDB110093.695ENSSPUG00000019338DDB110093.695Sphenodon_punctatus
ENSLACG00000017611DDB19790.987ENSSPAG00000009888ddb19991.146Stegastes_partitus
ENSLACG00000017611DDB110092.644ENSSSCG00000013094DDB110092.644Sus_scrofa
ENSLACG00000017611DDB110093.345ENSTGUG00000006414DDB110093.345Taeniopygia_guttata
ENSLACG00000017611DDB19789.848ENSTRUG00000016682ddb19989.860Takifugu_rubripes
ENSLACG00000017611DDB18884.861ENSTNIG00000009565ddb19984.861Tetraodon_nigroviridis
ENSLACG00000017611DDB19287.500ENSTTRG00000011055DDB19487.500Tursiops_truncatus
ENSLACG00000017611DDB19793.661ENSUAMG00000017793DDB19393.756Ursus_americanus
ENSLACG00000017611DDB19793.661ENSUMAG00000011788DDB19893.756Ursus_maritimus
ENSLACG00000017611DDB19090.385ENSVPAG00000007963DDB19290.385Vicugna_pacos
ENSLACG00000017611DDB110093.520ENSVVUG00000004987DDB110093.520Vulpes_vulpes
ENSLACG00000017611DDB110091.099ENSXETG00000008820ddb110091.099Xenopus_tropicalis
ENSLACG00000017611DDB18890.938ENSXCOG00000013956ddb19991.020Xiphophorus_couchianus
ENSLACG00000017611DDB19790.702ENSXMAG00000000022ddb19990.698Xiphophorus_maculatus