EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000017624 (Gene tree)
Gene ID: 102352022
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: putative threonylcarbamoyl-AMP synthase
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 14452 bases
Position: chrJH126703.1:2242135-2256586
Accession: 102352022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020051	Sua5_yciO_yrdC	PF01300.18	9e-38	1	1
ENSLACP00000020052	Sua5_yciO_yrdC	PF01300.18	1.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020189	-	1937	XM_005992898	ENSLACP00000020051	322 (aa)	XP_005992960	H3BDT0
ENSLACT00000020190	-	1476	-	ENSLACP00000020052	284 (aa)	-	H3BDT1

Gene Model

Click here to download ENSLACG00000017624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000017624	si:ch211-153b23.3	65	34.703	ENSLACG00000010689	YRDC	88	35.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSG00000196449	YRDC	68	32.039	Homo_sapiens
ENSLACG00000017624	si:ch211-153b23.3	68	31.278	ENSAPOG00000024293	yrdc	82	31.278	Acanthochromis_polyacanthus
ENSLACG00000017624	si:ch211-153b23.3	54	30.978	ENSAMEG00000001173	YRDC	90	30.978	Ailuropoda_melanoleuca
ENSLACG00000017624	si:ch211-153b23.3	67	31.081	ENSACIG00000017330	yrdc	79	31.081	Amphilophus_citrinellus
ENSLACG00000017624	si:ch211-153b23.3	68	31.718	ENSAOCG00000021647	yrdc	81	31.718	Amphiprion_ocellaris
ENSLACG00000017624	si:ch211-153b23.3	68	31.718	ENSAPEG00000006164	yrdc	81	31.718	Amphiprion_percula
ENSLACG00000017624	si:ch211-153b23.3	63	32.692	ENSATEG00000010086	yrdc	73	32.692	Anabas_testudineus
ENSLACG00000017624	si:ch211-153b23.3	57	30.928	ENSACAG00000017203	YRDC	87	31.156	Anolis_carolinensis
ENSLACG00000017624	si:ch211-153b23.3	60	32.020	ENSANAG00000028788	-	80	32.020	Aotus_nancymaae
ENSLACG00000017624	si:ch211-153b23.3	61	31.250	ENSANAG00000031052	-	70	31.250	Aotus_nancymaae
ENSLACG00000017624	si:ch211-153b23.3	66	31.364	ENSACLG00000027775	yrdc	77	31.364	Astatotilapia_calliptera
ENSLACG00000017624	si:ch211-153b23.3	64	32.093	ENSAMXG00000037791	yrdc	77	32.093	Astyanax_mexicanus
ENSLACG00000017624	si:ch211-153b23.3	61	31.754	ENSBTAG00000006510	YRDC	69	31.754	Bos_taurus
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSCJAG00000002078	YRDC	53	32.039	Callithrix_jacchus
ENSLACG00000017624	si:ch211-153b23.3	61	30.000	ENSCAFG00000003253	YRDC	70	30.000	Canis_familiaris
ENSLACG00000017624	si:ch211-153b23.3	61	30.952	ENSCAFG00020007843	YRDC	70	30.332	Canis_lupus_dingo
ENSLACG00000017624	si:ch211-153b23.3	61	32.227	ENSCHIG00000007882	YRDC	69	32.227	Capra_hircus
ENSLACG00000017624	si:ch211-153b23.3	61	31.280	ENSCPOG00000036144	YRDC	68	31.280	Cavia_porcellus
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSCCAG00000028891	YRDC	68	32.039	Cebus_capucinus
ENSLACG00000017624	si:ch211-153b23.3	52	31.579	ENSCATG00000036928	YRDC	68	31.553	Cercocebus_atys
ENSLACG00000017624	si:ch211-153b23.3	57	30.964	ENSCLAG00000015012	YRDC	68	31.905	Chinchilla_lanigera
ENSLACG00000017624	si:ch211-153b23.3	52	31.579	ENSCSAG00000001116	YRDC	68	31.553	Chlorocebus_sabaeus
ENSLACG00000017624	si:ch211-153b23.3	51	31.333	ENSCHOG00000005500	YRDC	66	31.333	Choloepus_hoffmanni
ENSLACG00000017624	si:ch211-153b23.3	61	32.512	ENSCPBG00000018446	YRDC	82	32.512	Chrysemys_picta_bellii
ENSLACG00000017624	si:ch211-153b23.3	58	32.086	ENSCING00000007564	-	83	32.086	Ciona_intestinalis
ENSLACG00000017624	si:ch211-153b23.3	53	35.465	ENSCSAVG00000009982	-	74	35.465	Ciona_savignyi
ENSLACG00000017624	si:ch211-153b23.3	53	32.075	ENSCANG00000031111	YRDC	68	32.039	Colobus_angolensis_palliatus
ENSLACG00000017624	si:ch211-153b23.3	62	31.308	ENSCGRG00001014496	-	69	31.308	Cricetulus_griseus_chok1gshd
ENSLACG00000017624	si:ch211-153b23.3	61	32.338	ENSCSEG00000019075	yrdc	69	32.338	Cynoglossus_semilaevis
ENSLACG00000017624	si:ch211-153b23.3	62	32.212	ENSCVAG00000017355	yrdc	74	32.212	Cyprinodon_variegatus
ENSLACG00000017624	si:ch211-153b23.3	61	32.500	ENSDARG00000041428	yrdc	79	32.500	Danio_rerio
ENSLACG00000017624	si:ch211-153b23.3	61	31.754	ENSDNOG00000038789	-	74	31.579	Dasypus_novemcinctus
ENSLACG00000017624	si:ch211-153b23.3	55	31.053	ENSDORG00000008788	Yrdc	77	31.053	Dipodomys_ordii
ENSLACG00000017624	si:ch211-153b23.3	54	32.335	FBgn0061361	CG33786	65	32.335	Drosophila_melanogaster
ENSLACG00000017624	si:ch211-153b23.3	58	31.937	ENSEBUG00000014080	yrdc	75	31.937	Eptatretus_burgeri
ENSLACG00000017624	si:ch211-153b23.3	61	31.553	ENSEASG00005012253	YRDC	68	31.553	Equus_asinus_asinus
ENSLACG00000017624	si:ch211-153b23.3	61	31.553	ENSECAG00000022522	YRDC	68	31.553	Equus_caballus
ENSLACG00000017624	si:ch211-153b23.3	59	31.658	ENSELUG00000018071	yrdc	60	31.658	Esox_lucius
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSFCAG00000011018	YRDC	68	32.039	Felis_catus
ENSLACG00000017624	si:ch211-153b23.3	99	69.279	ENSFALG00000011333	-	85	69.279	Ficedula_albicollis
ENSLACG00000017624	si:ch211-153b23.3	59	33.500	ENSFALG00000000964	YRDC	86	33.659	Ficedula_albicollis
ENSLACG00000017624	si:ch211-153b23.3	63	32.536	ENSFHEG00000001029	yrdc	74	33.333	Fundulus_heteroclitus
ENSLACG00000017624	si:ch211-153b23.3	62	32.178	ENSGMOG00000015635	yrdc	92	32.178	Gadus_morhua
ENSLACG00000017624	si:ch211-153b23.3	62	47.761	ENSGMOG00000006012	-	84	47.761	Gadus_morhua
ENSLACG00000017624	si:ch211-153b23.3	63	48.515	ENSGALG00000054964	-	78	48.515	Gallus_gallus
ENSLACG00000017624	si:ch211-153b23.3	91	70.408	ENSGALG00000025899	-	99	70.408	Gallus_gallus
ENSLACG00000017624	si:ch211-153b23.3	61	31.553	ENSGALG00000029001	YRDC	75	31.553	Gallus_gallus
ENSLACG00000017624	si:ch211-153b23.3	58	31.937	ENSGAFG00000008396	yrdc	67	31.937	Gambusia_affinis
ENSLACG00000017624	si:ch211-153b23.3	62	30.392	ENSGACG00000013878	yrdc	78	30.392	Gasterosteus_aculeatus
ENSLACG00000017624	si:ch211-153b23.3	61	47.475	ENSGACG00000018246	-	76	47.475	Gasterosteus_aculeatus
ENSLACG00000017624	si:ch211-153b23.3	58	31.771	ENSGAGG00000014968	YRDC	78	31.771	Gopherus_agassizii
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSGGOG00000007619	YRDC	68	32.039	Gorilla_gorilla
ENSLACG00000017624	si:ch211-153b23.3	66	31.364	ENSHBUG00000009298	yrdc	77	31.364	Haplochromis_burtoni
ENSLACG00000017624	si:ch211-153b23.3	66	31.140	ENSHGLG00000014075	YRDC	72	31.140	Heterocephalus_glaber_female
ENSLACG00000017624	si:ch211-153b23.3	65	31.111	ENSHGLG00100002734	YRDC	71	31.111	Heterocephalus_glaber_male
ENSLACG00000017624	si:ch211-153b23.3	59	30.256	ENSHCOG00000006598	yrdc	73	30.256	Hippocampus_comes
ENSLACG00000017624	si:ch211-153b23.3	68	31.169	ENSIPUG00000014985	yrdc	88	31.169	Ictalurus_punctatus
ENSLACG00000017624	si:ch211-153b23.3	61	32.227	ENSSTOG00000001643	YRDC	68	32.227	Ictidomys_tridecemlineatus
ENSLACG00000017624	si:ch211-153b23.3	66	32.127	ENSKMAG00000013468	yrdc	78	32.127	Kryptolebias_marmoratus
ENSLACG00000017624	si:ch211-153b23.3	67	33.621	ENSLBEG00000027501	yrdc	80	33.621	Labrus_bergylta
ENSLACG00000017624	si:ch211-153b23.3	61	32.857	ENSLAFG00000017556	YRDC	68	32.857	Loxodonta_africana
ENSLACG00000017624	si:ch211-153b23.3	52	31.126	ENSMFAG00000003487	YRDC	89	31.527	Macaca_fascicularis
ENSLACG00000017624	si:ch211-153b23.3	52	31.579	ENSMMUG00000005372	YRDC	51	31.553	Macaca_mulatta
ENSLACG00000017624	si:ch211-153b23.3	52	31.579	ENSMNEG00000029348	YRDC	68	31.553	Macaca_nemestrina
ENSLACG00000017624	si:ch211-153b23.3	65	33.178	ENSMAMG00000007315	yrdc	75	33.178	Mastacembelus_armatus
ENSLACG00000017624	si:ch211-153b23.3	66	31.364	ENSMZEG00005006948	yrdc	77	31.364	Maylandia_zebra
ENSLACG00000017624	si:ch211-153b23.3	99	70.000	ENSMGAG00000005489	-	86	70.000	Meleagris_gallopavo
ENSLACG00000017624	si:ch211-153b23.3	61	31.553	ENSMGAG00000002833	YRDC	93	31.553	Meleagris_gallopavo
ENSLACG00000017624	si:ch211-153b23.3	55	30.435	ENSMOCG00000000164	-	58	30.625	Microtus_ochrogaster
ENSLACG00000017624	si:ch211-153b23.3	70	32.174	ENSMMOG00000002119	yrdc	81	32.174	Mola_mola
ENSLACG00000017624	si:ch211-153b23.3	61	31.754	ENSMODG00000017750	YRDC	68	31.754	Monodelphis_domestica
ENSLACG00000017624	si:ch211-153b23.3	68	31.718	ENSMALG00000012471	yrdc	82	31.718	Monopterus_albus
ENSLACG00000017624	si:ch211-153b23.3	66	30.837	MGP_CAROLIEiJ_G0026453	Yrdc	73	30.837	Mus_caroli
ENSLACG00000017624	si:ch211-153b23.3	62	31.776	ENSMUSG00000028889	Yrdc	69	31.776	Mus_musculus
ENSLACG00000017624	si:ch211-153b23.3	62	31.776	MGP_PahariEiJ_G0028784	Yrdc	69	31.776	Mus_pahari
ENSLACG00000017624	si:ch211-153b23.3	66	31.004	MGP_SPRETEiJ_G0027432	Yrdc	74	31.004	Mus_spretus
ENSLACG00000017624	si:ch211-153b23.3	61	31.553	ENSMPUG00000014542	YRDC	76	31.553	Mustela_putorius_furo
ENSLACG00000017624	si:ch211-153b23.3	61	31.553	ENSMLUG00000000955	-	68	31.553	Myotis_lucifugus
ENSLACG00000017624	si:ch211-153b23.3	59	30.102	ENSMLUG00000024310	-	90	30.102	Myotis_lucifugus
ENSLACG00000017624	si:ch211-153b23.3	61	30.806	ENSNGAG00000019099	Yrdc	68	30.806	Nannospalax_galili
ENSLACG00000017624	si:ch211-153b23.3	66	31.364	ENSNBRG00000009475	yrdc	78	31.364	Neolamprologus_brichardi
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSNLEG00000011665	YRDC	69	32.039	Nomascus_leucogenys
ENSLACG00000017624	si:ch211-153b23.3	64	30.180	ENSMEUG00000005068	YRDC	93	30.180	Notamacropus_eugenii
ENSLACG00000017624	si:ch211-153b23.3	61	31.754	ENSODEG00000007401	YRDC	68	31.754	Octodon_degus
ENSLACG00000017624	si:ch211-153b23.3	64	30.374	ENSONIG00000016213	yrdc	85	30.374	Oreochromis_niloticus
ENSLACG00000017624	si:ch211-153b23.3	61	30.806	ENSOCUG00000005384	YRDC	65	30.806	Oryctolagus_cuniculus
ENSLACG00000017624	si:ch211-153b23.3	61	32.227	ENSOGAG00000030474	YRDC	69	32.227	Otolemur_garnettii
ENSLACG00000017624	si:ch211-153b23.3	61	32.227	ENSOARG00000019873	YRDC	68	32.227	Ovis_aries
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSPPRG00000007752	YRDC	68	32.039	Panthera_pardus
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSPTRG00000000557	YRDC	68	32.039	Pan_troglodytes
ENSLACG00000017624	si:ch211-153b23.3	51	32.000	ENSPANG00000006487	YRDC	51	31.553	Papio_anubis
ENSLACG00000017624	si:ch211-153b23.3	63	30.288	ENSPKIG00000004574	yrdc	72	30.288	Paramormyrops_kingsleyae
ENSLACG00000017624	si:ch211-153b23.3	70	32.035	ENSPSIG00000006483	YRDC	75	32.035	Pelodiscus_sinensis
ENSLACG00000017624	si:ch211-153b23.3	58	33.679	ENSPMGG00000004184	yrdc	69	33.679	Periophthalmus_magnuspinnatus
ENSLACG00000017624	si:ch211-153b23.3	58	32.474	ENSPMAG00000002905	yrdc	99	32.474	Petromyzon_marinus
ENSLACG00000017624	si:ch211-153b23.3	61	30.660	ENSPCIG00000025731	YRDC	68	31.000	Phascolarctos_cinereus
ENSLACG00000017624	si:ch211-153b23.3	58	30.366	ENSPREG00000005285	yrdc	67	30.366	Poecilia_reticulata
ENSLACG00000017624	si:ch211-153b23.3	61	32.039	ENSPPYG00000001523	-	78	32.039	Pongo_abelii
ENSLACG00000017624	si:ch211-153b23.3	61	33.810	ENSPCAG00000016850	YRDC	68	33.810	Procavia_capensis
ENSLACG00000017624	si:ch211-153b23.3	61	32.524	ENSPVAG00000010147	YRDC	68	32.524	Pteropus_vampyrus
ENSLACG00000017624	si:ch211-153b23.3	66	30.909	ENSPNYG00000013956	yrdc	77	30.909	Pundamilia_nyererei
ENSLACG00000017624	si:ch211-153b23.3	55	31.646	ENSPNAG00000015625	yrdc	62	31.646	Pygocentrus_nattereri
ENSLACG00000017624	si:ch211-153b23.3	66	31.441	ENSRNOG00000025424	Yrdc	74	31.441	Rattus_norvegicus
ENSLACG00000017624	si:ch211-153b23.3	53	31.447	ENSRBIG00000032289	YRDC	68	31.553	Rhinopithecus_bieti
ENSLACG00000017624	si:ch211-153b23.3	53	31.613	ENSRROG00000039370	YRDC	67	31.280	Rhinopithecus_roxellana
ENSLACG00000017624	si:ch211-153b23.3	59	31.343	ENSSBOG00000018937	YRDC	79	31.343	Saimiri_boliviensis_boliviensis
ENSLACG00000017624	si:ch211-153b23.3	99	64.174	ENSSFOG00015009030	-	50	64.174	Scleropages_formosus
ENSLACG00000017624	si:ch211-153b23.3	63	30.476	ENSSFOG00015006128	yrdc	84	30.476	Scleropages_formosus
ENSLACG00000017624	si:ch211-153b23.3	68	31.278	ENSSMAG00000005195	yrdc	81	31.278	Scophthalmus_maximus
ENSLACG00000017624	si:ch211-153b23.3	71	62.025	ENSSDUG00000006631	-	89	62.791	Seriola_dumerili
ENSLACG00000017624	si:ch211-153b23.3	69	63.677	ENSSDUG00000006736	-	96	63.677	Seriola_dumerili
ENSLACG00000017624	si:ch211-153b23.3	65	33.953	ENSSDUG00000009775	yrdc	76	33.953	Seriola_dumerili
ENSLACG00000017624	si:ch211-153b23.3	67	61.860	ENSSLDG00000008694	-	89	61.860	Seriola_lalandi_dorsalis
ENSLACG00000017624	si:ch211-153b23.3	65	33.953	ENSSLDG00000003196	yrdc	76	33.953	Seriola_lalandi_dorsalis
ENSLACG00000017624	si:ch211-153b23.3	63	31.754	ENSSPUG00000003946	YRDC	77	31.754	Sphenodon_punctatus
ENSLACG00000017624	si:ch211-153b23.3	68	31.718	ENSSPAG00000012559	yrdc	80	31.718	Stegastes_partitus
ENSLACG00000017624	si:ch211-153b23.3	61	31.280	ENSSSCG00000040425	YRDC	68	31.280	Sus_scrofa
ENSLACG00000017624	si:ch211-153b23.3	64	31.429	ENSTRUG00000005923	yrdc	72	32.381	Takifugu_rubripes
ENSLACG00000017624	si:ch211-153b23.3	58	32.653	ENSUAMG00000006150	YRDC	89	32.653	Ursus_americanus
ENSLACG00000017624	si:ch211-153b23.3	60	31.980	ENSXETG00000014420	yrdc	79	31.980	Xenopus_tropicalis