EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000017781 (Gene tree)
Gene ID: 102359290
Gene Symbol: SRPRA
Alias: SR-alpha|SRP-alpha|SRPR|Sralpha
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 26073 bases
Position: chrJH126650.1:2370879-2396951
Accession: 102359290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020231	SRP54	PF00448.22	1.5e-47	1	1
ENSLACP00000020232	SRP54	PF00448.22	1.5e-47	1	1
ENSLACP00000020232	SRP54_N	PF02881.19	7.5e-09	1	1
ENSLACP00000020231	SRP54_N	PF02881.19	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020372	SRPRA-202	1893	-	ENSLACP00000020232	630 (aa)	-	H3BEB1
ENSLACT00000020371	SRPRA-201	2244	XM_005991156	ENSLACP00000020231	639 (aa)	XP_005991218	H3BEB0

Gene Model

Click here to download ENSLACG00000017781's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017781	SRPRA	100	70.543	ENSG00000182934	SRPRA	100	70.543	Homo_sapiens
ENSLACG00000017781	SRPRA	100	71.148	ENSAPOG00000017588	srpra	100	70.045	Acanthochromis_polyacanthus
ENSLACG00000017781	SRPRA	100	70.370	ENSAMEG00000000117	SRPRA	100	70.433	Ailuropoda_melanoleuca
ENSLACG00000017781	SRPRA	100	69.909	ENSACIG00000021588	srpra	100	69.149	Amphilophus_citrinellus
ENSLACG00000017781	SRPRA	100	71.601	ENSAOCG00000018884	srpra	100	70.651	Amphiprion_ocellaris
ENSLACG00000017781	SRPRA	100	71.450	ENSAPEG00000022286	srpra	92	77.475	Amphiprion_percula
ENSLACG00000017781	SRPRA	85	88.889	ENSATEG00000023578	srpra	83	88.545	Anabas_testudineus
ENSLACG00000017781	SRPRA	94	73.333	ENSAPLG00000016079	SRPRA	99	73.333	Anas_platyrhynchos
ENSLACG00000017781	SRPRA	100	71.951	ENSACAG00000000108	SRPRA	100	72.866	Anolis_carolinensis
ENSLACG00000017781	SRPRA	100	70.479	ENSANAG00000020346	SRPRA	100	70.479	Aotus_nancymaae
ENSLACG00000017781	SRPRA	100	72.534	ENSACLG00000000518	srpra	100	71.125	Astatotilapia_calliptera
ENSLACG00000017781	SRPRA	100	67.341	ENSAMXG00000009975	srpra	100	66.044	Astyanax_mexicanus
ENSLACG00000017781	SRPRA	100	70.124	ENSBTAG00000014105	SRPRA	100	70.898	Bos_taurus
ENSLACG00000017781	SRPRA	99	49.165	WBGene00009521	F38A1.8	99	48.476	Caenorhabditis_elegans
ENSLACG00000017781	SRPRA	100	70.433	ENSCJAG00000008752	SRPRA	100	70.433	Callithrix_jacchus
ENSLACG00000017781	SRPRA	100	68.519	ENSCAFG00000010474	SRPRA	100	68.519	Canis_familiaris
ENSLACG00000017781	SRPRA	100	70.216	ENSCAFG00020010608	SRPRA	100	70.216	Canis_lupus_dingo
ENSLACG00000017781	SRPRA	100	71.517	ENSCHIG00000012423	SRPRA	100	70.743	Capra_hircus
ENSLACG00000017781	SRPRA	81	81.356	ENSTSYG00000005187	SRPRA	100	76.923	Carlito_syrichta
ENSLACG00000017781	SRPRA	95	68.595	ENSCAPG00000007098	SRPRA	91	85.714	Cavia_aperea
ENSLACG00000017781	SRPRA	100	70.388	ENSCPOG00000014976	SRPRA	91	85.714	Cavia_porcellus
ENSLACG00000017781	SRPRA	100	70.325	ENSCCAG00000025602	SRPRA	100	70.325	Cebus_capucinus
ENSLACG00000017781	SRPRA	100	70.479	ENSCATG00000039354	SRPRA	100	70.634	Cercocebus_atys
ENSLACG00000017781	SRPRA	100	70.233	ENSCLAG00000016839	SRPRA	100	70.233	Chinchilla_lanigera
ENSLACG00000017781	SRPRA	100	70.325	ENSCSAG00000002271	SRPRA	100	70.325	Chlorocebus_sabaeus
ENSLACG00000017781	SRPRA	55	86.224	ENSCHOG00000010015	-	73	86.224	Choloepus_hoffmanni
ENSLACG00000017781	SRPRA	100	74.581	ENSCPBG00000011128	SRPRA	100	73.820	Chrysemys_picta_bellii
ENSLACG00000017781	SRPRA	99	56.925	ENSCING00000008954	-	100	57.056	Ciona_intestinalis
ENSLACG00000017781	SRPRA	99	58.879	ENSCSAVG00000005602	-	100	58.204	Ciona_savignyi
ENSLACG00000017781	SRPRA	100	70.170	ENSCANG00000032337	SRPRA	100	70.388	Colobus_angolensis_palliatus
ENSLACG00000017781	SRPRA	100	70.353	ENSCGRG00001017670	Srpr	100	70.507	Cricetulus_griseus_chok1gshd
ENSLACG00000017781	SRPRA	100	70.353	ENSCGRG00000009892	Srpr	90	85.926	Cricetulus_griseus_crigri
ENSLACG00000017781	SRPRA	100	71.729	ENSCSEG00000002374	srpra	100	70.783	Cynoglossus_semilaevis
ENSLACG00000017781	SRPRA	100	70.977	ENSCVAG00000019881	srpra	100	70.181	Cyprinodon_variegatus
ENSLACG00000017781	SRPRA	100	69.127	ENSDARG00000061124	srpra	100	67.421	Danio_rerio
ENSLACG00000017781	SRPRA	100	71.275	ENSDNOG00000010821	SRPRA	100	70.308	Dasypus_novemcinctus
ENSLACG00000017781	SRPRA	100	70.078	ENSDORG00000016719	Srpr	100	70.233	Dipodomys_ordii
ENSLACG00000017781	SRPRA	99	52.426	FBgn0010391	Gtp-bp	100	52.673	Drosophila_melanogaster
ENSLACG00000017781	SRPRA	100	69.939	ENSETEG00000013956	SRPRA	100	69.124	Echinops_telfairi
ENSLACG00000017781	SRPRA	51	80.374	ENSEBUG00000002602	srpra	96	66.133	Eptatretus_burgeri
ENSLACG00000017781	SRPRA	100	70.988	ENSEASG00005022980	SRPRA	100	70.062	Equus_asinus_asinus
ENSLACG00000017781	SRPRA	100	71.142	ENSECAG00000014692	SRPRA	100	70.216	Equus_caballus
ENSLACG00000017781	SRPRA	100	63.775	ENSEEUG00000007920	SRPRA	100	64.142	Erinaceus_europaeus
ENSLACG00000017781	SRPRA	100	69.301	ENSELUG00000017643	srpra	100	69.592	Esox_lucius
ENSLACG00000017781	SRPRA	80	66.154	ENSFCAG00000030894	-	99	65.000	Felis_catus
ENSLACG00000017781	SRPRA	100	71.296	ENSFCAG00000011274	-	100	70.370	Felis_catus
ENSLACG00000017781	SRPRA	99	69.646	ENSFALG00000005048	SRPRA	99	69.646	Ficedula_albicollis
ENSLACG00000017781	SRPRA	100	70.388	ENSFDAG00000016229	SRPRA	92	81.119	Fukomys_damarensis
ENSLACG00000017781	SRPRA	100	72.114	ENSFHEG00000016959	srpra	100	70.721	Fundulus_heteroclitus
ENSLACG00000017781	SRPRA	100	70.444	ENSGMOG00000013244	srpra	100	69.678	Gadus_morhua
ENSLACG00000017781	SRPRA	100	73.476	ENSGALG00000030759	SRPRA	100	73.476	Gallus_gallus
ENSLACG00000017781	SRPRA	100	70.181	ENSGAFG00000000453	srpra	100	70.091	Gambusia_affinis
ENSLACG00000017781	SRPRA	100	72.936	ENSGACG00000006550	srpra	100	71.363	Gasterosteus_aculeatus
ENSLACG00000017781	SRPRA	100	75.190	ENSGAGG00000021157	SRPRA	100	74.429	Gopherus_agassizii
ENSLACG00000017781	SRPRA	100	70.543	ENSGGOG00000012962	SRPRA	100	70.543	Gorilla_gorilla
ENSLACG00000017781	SRPRA	100	72.686	ENSHBUG00000000119	srpra	100	71.277	Haplochromis_burtoni
ENSLACG00000017781	SRPRA	100	70.092	ENSHGLG00000001597	SRPR	94	86.364	Heterocephalus_glaber_female
ENSLACG00000017781	SRPRA	100	70.092	ENSHGLG00100006449	SRPR	94	86.364	Heterocephalus_glaber_male
ENSLACG00000017781	SRPRA	100	70.703	ENSHCOG00000010749	srpra	94	76.980	Hippocampus_comes
ENSLACG00000017781	SRPRA	94	65.978	ENSIPUG00000000867	srpra	99	64.856	Ictalurus_punctatus
ENSLACG00000017781	SRPRA	100	70.233	ENSSTOG00000009897	SRPRA	100	70.233	Ictidomys_tridecemlineatus
ENSLACG00000017781	SRPRA	100	69.599	ENSJJAG00000020272	Srpr	100	69.599	Jaculus_jaculus
ENSLACG00000017781	SRPRA	100	72.414	ENSKMAG00000002280	srpra	100	70.871	Kryptolebias_marmoratus
ENSLACG00000017781	SRPRA	100	71.192	ENSLBEG00000009608	srpra	100	70.242	Labrus_bergylta
ENSLACG00000017781	SRPRA	100	69.789	ENSLOCG00000002733	srpra	100	68.892	Lepisosteus_oculatus
ENSLACG00000017781	SRPRA	100	69.552	ENSLAFG00000010252	SRPRA	100	70.325	Loxodonta_africana
ENSLACG00000017781	SRPRA	100	70.479	ENSMFAG00000032606	SRPRA	100	70.479	Macaca_fascicularis
ENSLACG00000017781	SRPRA	100	70.479	ENSMMUG00000007938	SRPRA	100	70.479	Macaca_mulatta
ENSLACG00000017781	SRPRA	100	70.543	ENSMNEG00000030709	SRPRA	100	70.543	Macaca_nemestrina
ENSLACG00000017781	SRPRA	100	70.479	ENSMLEG00000043404	SRPRA	100	70.634	Mandrillus_leucophaeus
ENSLACG00000017781	SRPRA	100	70.152	ENSMAMG00000000473	srpra	100	69.909	Mastacembelus_armatus
ENSLACG00000017781	SRPRA	100	72.534	ENSMZEG00005013432	srpra	100	71.125	Maylandia_zebra
ENSLACG00000017781	SRPRA	94	72.801	ENSMGAG00000000732	SRPRA	100	72.801	Meleagris_gallopavo
ENSLACG00000017781	SRPRA	100	70.615	ENSMAUG00000015648	Srpr	100	70.615	Mesocricetus_auratus
ENSLACG00000017781	SRPRA	100	70.031	ENSMICG00000015981	SRPRA	100	70.031	Microcebus_murinus
ENSLACG00000017781	SRPRA	100	70.507	ENSMOCG00000008311	Srpr	100	70.661	Microtus_ochrogaster
ENSLACG00000017781	SRPRA	100	69.159	ENSMMOG00000005019	srpra	100	67.287	Mola_mola
ENSLACG00000017781	SRPRA	100	70.859	ENSMODG00000004576	-	100	69.172	Monodelphis_domestica
ENSLACG00000017781	SRPRA	100	68.437	ENSMALG00000011343	srpra	100	67.678	Monopterus_albus
ENSLACG00000017781	SRPRA	100	70.200	MGP_CAROLIEiJ_G0031951	Srpr	86	87.121	Mus_caroli
ENSLACG00000017781	SRPRA	100	70.661	ENSMUSG00000032042	Srpr	86	86.364	Mus_musculus
ENSLACG00000017781	SRPRA	100	70.046	MGP_PahariEiJ_G0014816	Srpr	86	86.364	Mus_pahari
ENSLACG00000017781	SRPRA	100	67.007	MGP_SPRETEiJ_G0033075	Srpr	100	66.959	Mus_spretus
ENSLACG00000017781	SRPRA	100	70.489	ENSMPUG00000006626	SRPRA	100	70.489	Mustela_putorius_furo
ENSLACG00000017781	SRPRA	100	70.279	ENSMLUG00000017334	SRPRA	100	70.124	Myotis_lucifugus
ENSLACG00000017781	SRPRA	100	70.388	ENSNGAG00000015686	Srpr	100	70.388	Nannospalax_galili
ENSLACG00000017781	SRPRA	100	72.273	ENSNBRG00000017311	srpra	100	71.429	Neolamprologus_brichardi
ENSLACG00000017781	SRPRA	99	67.083	ENSNLEG00000007467	SRPRA	100	69.643	Nomascus_leucogenys
ENSLACG00000017781	SRPRA	94	69.984	ENSMEUG00000004956	SRPRA	100	69.168	Notamacropus_eugenii
ENSLACG00000017781	SRPRA	100	65.639	ENSOPRG00000013160	SRPRA	100	65.794	Ochotona_princeps
ENSLACG00000017781	SRPRA	100	70.588	ENSODEG00000004730	SRPRA	100	69.969	Octodon_degus
ENSLACG00000017781	SRPRA	100	71.558	ENSONIG00000005324	srpra	100	70.713	Oreochromis_niloticus
ENSLACG00000017781	SRPRA	100	70.433	ENSOCUG00000017057	SRPRA	100	70.433	Oryctolagus_cuniculus
ENSLACG00000017781	SRPRA	85	88.571	ENSORLG00000014676	srpra	100	69.651	Oryzias_latipes
ENSLACG00000017781	SRPRA	100	71.061	ENSORLG00020009240	srpra	100	69.803	Oryzias_latipes_hni
ENSLACG00000017781	SRPRA	100	70.948	ENSORLG00015015405	srpra	100	69.832	Oryzias_latipes_hsok
ENSLACG00000017781	SRPRA	100	70.909	ENSOMEG00000005872	srpra	100	69.651	Oryzias_melastigma
ENSLACG00000017781	SRPRA	100	70.923	ENSOGAG00000008926	SRPRA	100	70.525	Otolemur_garnettii
ENSLACG00000017781	SRPRA	100	68.056	ENSOARG00000012397	SRPRA	100	68.827	Ovis_aries
ENSLACG00000017781	SRPRA	100	70.543	ENSPPAG00000030813	SRPRA	100	70.543	Pan_paniscus
ENSLACG00000017781	SRPRA	100	71.296	ENSPPRG00000001542	SRPRA	100	70.370	Panthera_pardus
ENSLACG00000017781	SRPRA	100	71.142	ENSPTIG00000006989	SRPRA	100	70.216	Panthera_tigris_altaica
ENSLACG00000017781	SRPRA	100	70.543	ENSPTRG00000028360	SRPRA	100	70.543	Pan_troglodytes
ENSLACG00000017781	SRPRA	100	70.479	ENSPANG00000010858	SRPRA	100	70.479	Papio_anubis
ENSLACG00000017781	SRPRA	100	66.667	ENSPKIG00000016106	srpra	100	67.178	Paramormyrops_kingsleyae
ENSLACG00000017781	SRPRA	94	74.797	ENSPSIG00000012009	SRPRA	100	73.821	Pelodiscus_sinensis
ENSLACG00000017781	SRPRA	100	71.118	ENSPMGG00000001393	srpra	100	71.429	Periophthalmus_magnuspinnatus
ENSLACG00000017781	SRPRA	100	70.200	ENSPEMG00000018279	Srpr	100	70.353	Peromyscus_maniculatus_bairdii
ENSLACG00000017781	SRPRA	99	62.980	ENSPMAG00000009559	srpra	99	63.014	Petromyzon_marinus
ENSLACG00000017781	SRPRA	100	70.706	ENSPCIG00000010207	SRPRA	100	70.706	Phascolarctos_cinereus
ENSLACG00000017781	SRPRA	100	69.670	ENSPFOG00000003114	srpra	100	70.165	Poecilia_formosa
ENSLACG00000017781	SRPRA	100	69.716	ENSPLAG00000007323	srpra	93	77.451	Poecilia_latipinna
ENSLACG00000017781	SRPRA	100	69.670	ENSPMEG00000015658	srpra	100	70.165	Poecilia_mexicana
ENSLACG00000017781	SRPRA	100	71.171	ENSPREG00000004937	srpra	93	76.904	Poecilia_reticulata
ENSLACG00000017781	SRPRA	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSLACG00000017781	SRPRA	63	90.698	ENSPCAG00000003801	-	62	90.698	Procavia_capensis
ENSLACG00000017781	SRPRA	100	69.572	ENSPCOG00000025726	SRPRA	100	69.572	Propithecus_coquereli
ENSLACG00000017781	SRPRA	100	69.814	ENSPVAG00000000993	SRPRA	100	69.969	Pteropus_vampyrus
ENSLACG00000017781	SRPRA	100	72.534	ENSPNYG00000012371	srpra	100	71.125	Pundamilia_nyererei
ENSLACG00000017781	SRPRA	100	67.474	ENSPNAG00000013476	srpra	100	67.121	Pygocentrus_nattereri
ENSLACG00000017781	SRPRA	100	70.200	ENSRNOG00000010543	Srpra	100	70.353	Rattus_norvegicus
ENSLACG00000017781	SRPRA	100	70.943	ENSRBIG00000008702	SRPRA	100	70.325	Rhinopithecus_bieti
ENSLACG00000017781	SRPRA	100	70.370	ENSRROG00000029494	SRPRA	100	70.370	Rhinopithecus_roxellana
ENSLACG00000017781	SRPRA	55	41.019	YDR292C	-	70	38.009	Saccharomyces_cerevisiae
ENSLACG00000017781	SRPRA	100	70.325	ENSSBOG00000035892	SRPRA	100	70.325	Saimiri_boliviensis_boliviensis
ENSLACG00000017781	SRPRA	94	70.130	ENSSHAG00000009168	SRPRA	100	69.481	Sarcophilus_harrisii
ENSLACG00000017781	SRPRA	100	67.035	ENSSFOG00015008837	srpra	91	76.238	Scleropages_formosus
ENSLACG00000017781	SRPRA	100	69.620	ENSSMAG00000002783	srpra	100	68.829	Scophthalmus_maximus
ENSLACG00000017781	SRPRA	100	71.021	ENSSDUG00000013920	srpra	93	75.728	Seriola_dumerili
ENSLACG00000017781	SRPRA	100	71.171	ENSSLDG00000008601	srpra	93	69.985	Seriola_lalandi_dorsalis
ENSLACG00000017781	SRPRA	81	87.179	ENSSARG00000012434	SRPRA	86	87.179	Sorex_araneus
ENSLACG00000017781	SRPRA	100	71.037	ENSSPUG00000018221	SRPRA	100	71.799	Sphenodon_punctatus
ENSLACG00000017781	SRPRA	100	71.386	ENSSPAG00000005103	srpra	100	70.739	Stegastes_partitus
ENSLACG00000017781	SRPRA	100	70.988	ENSSSCG00000015227	SRPRA	100	70.988	Sus_scrofa
ENSLACG00000017781	SRPRA	94	69.756	ENSTGUG00000000815	SRPRA	100	69.756	Taeniopygia_guttata
ENSLACG00000017781	SRPRA	100	68.855	ENSTRUG00000006856	srpra	100	68.589	Takifugu_rubripes
ENSLACG00000017781	SRPRA	100	66.767	ENSTNIG00000010316	srpra	100	65.964	Tetraodon_nigroviridis
ENSLACG00000017781	SRPRA	100	71.406	ENSTTRG00000001558	SRPRA	100	70.479	Tursiops_truncatus
ENSLACG00000017781	SRPRA	100	69.138	ENSUAMG00000005510	SRPRA	100	69.138	Ursus_americanus
ENSLACG00000017781	SRPRA	96	65.434	ENSUMAG00000002269	SRPRA	100	65.700	Ursus_maritimus
ENSLACG00000017781	SRPRA	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSLACG00000017781	SRPRA	100	70.525	ENSVVUG00000020094	SRPRA	100	70.525	Vulpes_vulpes
ENSLACG00000017781	SRPRA	100	65.060	ENSXETG00000003920	srpra	100	65.361	Xenopus_tropicalis
ENSLACG00000017781	SRPRA	87	89.206	ENSXCOG00000001286	srpra	88	87.087	Xiphophorus_couchianus
ENSLACG00000017781	SRPRA	100	71.299	ENSXMAG00000028401	srpra	100	70.242	Xiphophorus_maculatus