EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000017942 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1103 bases
Position: chrJH126641.1:2527312-2528414
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020414	zf-CCHC	PF00098.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020554	-	954	-	ENSLACP00000020414	318 (aa)	-	H3BEU3

Gene Model

Click here to download ENSLACG00000017942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000017942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000017942	-	97	59.688	ENSLACG00000004531	-	98	59.688
ENSLACG00000017942	-	100	85.981	ENSLACG00000000325	-	98	85.981
ENSLACG00000017942	-	86	53.004	ENSLACG00000010543	-	98	53.004
ENSLACG00000017942	-	100	52.071	ENSLACG00000002057	-	98	52.663
ENSLACG00000017942	-	100	44.545	ENSLACG00000002836	-	98	44.545
ENSLACG00000017942	-	99	54.518	ENSLACG00000004689	-	92	54.518
ENSLACG00000017942	-	99	63.830	ENSLACG00000008039	-	98	63.830
ENSLACG00000017942	-	98	66.875	ENSLACG00000006128	-	98	66.875
ENSLACG00000017942	-	98	67.296	ENSLACG00000004000	-	100	67.296
ENSLACG00000017942	-	86	50.836	ENSLACG00000012908	-	98	50.836
ENSLACG00000017942	-	99	63.551	ENSLACG00000002363	-	80	63.551
ENSLACG00000017942	-	98	82.132	ENSLACG00000002768	-	84	82.132
ENSLACG00000017942	-	70	84.821	ENSLACG00000012373	-	76	84.821
ENSLACG00000017942	-	89	66.124	ENSLACG00000005078	-	98	66.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000017942	-	99	30.352	ENSCPBG00000004672	-	58	30.811	Chrysemys_picta_bellii
ENSLACG00000017942	-	73	42.222	ENSCPBG00000028243	-	86	42.222	Chrysemys_picta_bellii
ENSLACG00000017942	-	55	46.316	ENSGAGG00000002892	-	89	46.316	Gopherus_agassizii
ENSLACG00000017942	-	99	46.567	ENSXETG00000019379	-	81	46.567	Xenopus_tropicalis
ENSLACG00000017942	-	98	47.531	ENSXETG00000026538	-	80	47.531	Xenopus_tropicalis
ENSLACG00000017942	-	99	48.466	ENSXETG00000006819	-	75	48.466	Xenopus_tropicalis
ENSLACG00000017942	-	99	48.160	ENSXETG00000005082	ankrd31	81	48.160	Xenopus_tropicalis