EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018052 (Gene tree)
Gene ID: 102350681
Gene Symbol: PTRHD1
Alias: C2orf79|LOC391356
Full Name: peptidyl-tRNA hydrolase domain containing 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 12547 bases
Position: chrJH126645.1:2668820-2681366
Accession: 102350681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020540	PTH2	PF01981.16	6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020680	PTRHD1-201	2599	XM_005991042	ENSLACP00000020540	126 (aa)	XP_005991104	H3BF69

Gene Model

Click here to download ENSLACG00000018052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018052's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018052	PTRHD1	100	58.268	ENSG00000184924	PTRHD1	82	60.345	Homo_sapiens
ENSLACG00000018052	PTRHD1	100	68.254	ENSAPOG00000024433	ptrhd1	91	72.174	Acanthochromis_polyacanthus
ENSLACG00000018052	PTRHD1	91	56.897	ENSAMEG00000002651	PTRHD1	75	59.048	Ailuropoda_melanoleuca
ENSLACG00000018052	PTRHD1	100	68.254	ENSACIG00000002596	ptrhd1	91	72.174	Amphilophus_citrinellus
ENSLACG00000018052	PTRHD1	100	68.254	ENSAOCG00000007632	ptrhd1	91	72.174	Amphiprion_ocellaris
ENSLACG00000018052	PTRHD1	100	68.254	ENSAPEG00000011491	ptrhd1	91	72.174	Amphiprion_percula
ENSLACG00000018052	PTRHD1	100	69.048	ENSATEG00000019199	ptrhd1	91	72.174	Anabas_testudineus
ENSLACG00000018052	PTRHD1	100	58.268	ENSANAG00000019089	PTRHD1	83	59.664	Aotus_nancymaae
ENSLACG00000018052	PTRHD1	100	68.254	ENSACLG00000000814	ptrhd1	91	72.174	Astatotilapia_calliptera
ENSLACG00000018052	PTRHD1	100	67.717	ENSAMXG00000034266	ptrhd1	81	68.966	Astyanax_mexicanus
ENSLACG00000018052	PTRHD1	100	60.630	ENSBTAG00000015012	PTRHD1	75	65.714	Bos_taurus
ENSLACG00000018052	PTRHD1	90	51.327	WBGene00050885	Y94H6A.12	84	51.456	Caenorhabditis_elegans
ENSLACG00000018052	PTRHD1	100	57.480	ENSCJAG00000008012	PTRHD1	82	59.483	Callithrix_jacchus
ENSLACG00000018052	PTRHD1	100	58.268	ENSCAFG00000024865	PTRHD1	82	60.345	Canis_familiaris
ENSLACG00000018052	PTRHD1	100	60.630	ENSCHIG00000014757	PTRHD1	75	65.714	Capra_hircus
ENSLACG00000018052	PTRHD1	97	58.400	ENSTSYG00000009995	PTRHD1	81	61.404	Carlito_syrichta
ENSLACG00000018052	PTRHD1	100	57.480	ENSCPOG00000005561	PTRHD1	82	59.483	Cavia_porcellus
ENSLACG00000018052	PTRHD1	100	58.268	ENSCCAG00000033856	PTRHD1	82	60.345	Cebus_capucinus
ENSLACG00000018052	PTRHD1	100	58.730	ENSCATG00000033690	PTRHD1	82	60.870	Cercocebus_atys
ENSLACG00000018052	PTRHD1	91	60.345	ENSCLAG00000006505	PTRHD1	72	62.857	Chinchilla_lanigera
ENSLACG00000018052	PTRHD1	100	58.268	ENSCSAG00000008490	PTRHD1	82	60.345	Chlorocebus_sabaeus
ENSLACG00000018052	PTRHD1	91	49.565	ENSCHOG00000001920	PTRHD1	76	50.962	Choloepus_hoffmanni
ENSLACG00000018052	PTRHD1	100	62.992	ENSCPBG00000022276	PTRHD1	82	62.069	Chrysemys_picta_bellii
ENSLACG00000018052	PTRHD1	91	56.522	ENSCING00000019647	-	88	57.692	Ciona_intestinalis
ENSLACG00000018052	PTRHD1	100	58.268	ENSCANG00000034444	PTRHD1	82	60.345	Colobus_angolensis_palliatus
ENSLACG00000018052	PTRHD1	95	57.600	ENSCGRG00001003289	Ptrhd1	54	59.649	Cricetulus_griseus_chok1gshd
ENSLACG00000018052	PTRHD1	95	57.600	ENSCGRG00000011834	Ptrhd1	81	59.649	Cricetulus_griseus_crigri
ENSLACG00000018052	PTRHD1	100	66.929	ENSCSEG00000006943	ptrhd1	91	69.828	Cynoglossus_semilaevis
ENSLACG00000018052	PTRHD1	100	66.667	ENSCVAG00000016345	ptrhd1	91	69.565	Cyprinodon_variegatus
ENSLACG00000018052	PTRHD1	100	68.254	ENSDARG00000016122	ptrhd1	91	70.435	Danio_rerio
ENSLACG00000018052	PTRHD1	91	58.621	ENSDNOG00000043646	PTRHD1	70	60.952	Dasypus_novemcinctus
ENSLACG00000018052	PTRHD1	91	58.621	ENSDORG00000026776	Ptrhd1	76	61.905	Dipodomys_ordii
ENSLACG00000018052	PTRHD1	93	66.667	FBgn0038446	CG14903	89	66.038	Drosophila_melanogaster
ENSLACG00000018052	PTRHD1	91	46.957	ENSETEG00000009379	-	75	49.038	Echinops_telfairi
ENSLACG00000018052	PTRHD1	56	54.930	ENSETEG00000001615	-	83	54.930	Echinops_telfairi
ENSLACG00000018052	PTRHD1	94	57.627	ENSEBUG00000002249	ptrhd1	88	56.075	Eptatretus_burgeri
ENSLACG00000018052	PTRHD1	91	42.373	ENSEASG00005001302	-	73	42.056	Equus_asinus_asinus
ENSLACG00000018052	PTRHD1	91	43.103	ENSECAG00000005314	-	71	42.056	Equus_caballus
ENSLACG00000018052	PTRHD1	100	58.268	ENSECAG00000017730	PTRHD1	82	60.345	Equus_caballus
ENSLACG00000018052	PTRHD1	91	56.034	ENSEEUG00000004263	PTRHD1	75	59.048	Erinaceus_europaeus
ENSLACG00000018052	PTRHD1	100	67.460	ENSELUG00000003837	ptrhd1	91	69.565	Esox_lucius
ENSLACG00000018052	PTRHD1	100	57.480	ENSFCAG00000003648	PTRHD1	82	59.483	Felis_catus
ENSLACG00000018052	PTRHD1	100	58.268	ENSFDAG00000004017	PTRHD1	82	61.207	Fukomys_damarensis
ENSLACG00000018052	PTRHD1	100	68.254	ENSFHEG00000009135	ptrhd1	91	71.304	Fundulus_heteroclitus
ENSLACG00000018052	PTRHD1	91	60.000	ENSGALG00000016610	PTRHD1	85	55.462	Gallus_gallus
ENSLACG00000018052	PTRHD1	100	69.841	ENSGAFG00000005717	ptrhd1	91	73.043	Gambusia_affinis
ENSLACG00000018052	PTRHD1	99	64.800	ENSGACG00000006743	ptrhd1	90	67.544	Gasterosteus_aculeatus
ENSLACG00000018052	PTRHD1	100	63.780	ENSGAGG00000023951	PTRHD1	91	62.931	Gopherus_agassizii
ENSLACG00000018052	PTRHD1	100	57.480	ENSGGOG00000043870	PTRHD1	91	59.483	Gorilla_gorilla
ENSLACG00000018052	PTRHD1	100	68.254	ENSHBUG00000014289	ptrhd1	91	72.174	Haplochromis_burtoni
ENSLACG00000018052	PTRHD1	97	55.200	ENSHGLG00000008203	PTRHD1	81	57.895	Heterocephalus_glaber_female
ENSLACG00000018052	PTRHD1	97	56.000	ENSHGLG00100012553	PTRHD1	81	58.772	Heterocephalus_glaber_male
ENSLACG00000018052	PTRHD1	97	55.200	ENSHGLG00100004341	-	83	57.895	Heterocephalus_glaber_male
ENSLACG00000018052	PTRHD1	100	70.866	ENSHCOG00000013504	ptrhd1	91	74.138	Hippocampus_comes
ENSLACG00000018052	PTRHD1	94	66.102	ENSIPUG00000004885	ptrhd1	90	68.224	Ictalurus_punctatus
ENSLACG00000018052	PTRHD1	91	60.345	ENSSTOG00000006030	PTRHD1	75	62.857	Ictidomys_tridecemlineatus
ENSLACG00000018052	PTRHD1	100	59.055	ENSJJAG00000024180	Ptrhd1	83	61.207	Jaculus_jaculus
ENSLACG00000018052	PTRHD1	89	65.179	ENSKMAG00000016961	ptrhd1	89	69.307	Kryptolebias_marmoratus
ENSLACG00000018052	PTRHD1	100	67.460	ENSLBEG00000024406	ptrhd1	91	70.435	Labrus_bergylta
ENSLACG00000018052	PTRHD1	100	68.750	ENSLOCG00000015890	ptrhd1	91	71.795	Lepisosteus_oculatus
ENSLACG00000018052	PTRHD1	91	57.759	ENSLAFG00000014453	PTRHD1	75	60.000	Loxodonta_africana
ENSLACG00000018052	PTRHD1	100	57.480	ENSMFAG00000040267	PTRHD1	82	59.483	Macaca_fascicularis
ENSLACG00000018052	PTRHD1	100	57.480	ENSMMUG00000009598	PTRHD1	82	59.483	Macaca_mulatta
ENSLACG00000018052	PTRHD1	100	57.480	ENSMNEG00000035044	PTRHD1	82	59.483	Macaca_nemestrina
ENSLACG00000018052	PTRHD1	100	56.349	ENSMLEG00000030314	PTRHD1	82	58.261	Mandrillus_leucophaeus
ENSLACG00000018052	PTRHD1	100	67.460	ENSMAMG00000021201	ptrhd1	91	70.435	Mastacembelus_armatus
ENSLACG00000018052	PTRHD1	100	68.254	ENSMZEG00005021808	ptrhd1	91	72.174	Maylandia_zebra
ENSLACG00000018052	PTRHD1	100	57.480	ENSMAUG00000019251	Ptrhd1	82	59.483	Mesocricetus_auratus
ENSLACG00000018052	PTRHD1	91	60.345	ENSMICG00000001578	PTRHD1	75	62.857	Microcebus_murinus
ENSLACG00000018052	PTRHD1	95	57.600	ENSMOCG00000001204	Ptrhd1	81	58.772	Microtus_ochrogaster
ENSLACG00000018052	PTRHD1	100	65.873	ENSMMOG00000015284	ptrhd1	91	68.696	Mola_mola
ENSLACG00000018052	PTRHD1	100	55.906	ENSMODG00000015895	PTRHD1	82	56.034	Monodelphis_domestica
ENSLACG00000018052	PTRHD1	100	67.460	ENSMALG00000003471	ptrhd1	91	70.435	Monopterus_albus
ENSLACG00000018052	PTRHD1	91	59.483	MGP_CAROLIEiJ_G0017582	Ptrhd1	75	61.905	Mus_caroli
ENSLACG00000018052	PTRHD1	91	59.483	ENSMUSG00000096199	Ptrhd1	75	61.905	Mus_musculus
ENSLACG00000018052	PTRHD1	91	59.483	MGP_SPRETEiJ_G0018426	Ptrhd1	75	61.905	Mus_spretus
ENSLACG00000018052	PTRHD1	91	56.897	ENSMPUG00000014016	PTRHD1	75	59.048	Mustela_putorius_furo
ENSLACG00000018052	PTRHD1	100	58.268	ENSMLUG00000014127	PTRHD1	82	60.345	Myotis_lucifugus
ENSLACG00000018052	PTRHD1	100	59.055	ENSNGAG00000016335	Ptrhd1	82	61.207	Nannospalax_galili
ENSLACG00000018052	PTRHD1	100	68.254	ENSNBRG00000009690	ptrhd1	91	72.174	Neolamprologus_brichardi
ENSLACG00000018052	PTRHD1	100	58.268	ENSNLEG00000000990	PTRHD1	82	60.345	Nomascus_leucogenys
ENSLACG00000018052	PTRHD1	56	53.521	ENSMEUG00000010482	-	84	53.521	Notamacropus_eugenii
ENSLACG00000018052	PTRHD1	100	55.118	ENSOPRG00000008600	PTRHD1	82	56.897	Ochotona_princeps
ENSLACG00000018052	PTRHD1	91	61.207	ENSODEG00000007805	PTRHD1	72	63.810	Octodon_degus
ENSLACG00000018052	PTRHD1	100	69.048	ENSONIG00000015722	ptrhd1	85	73.043	Oreochromis_niloticus
ENSLACG00000018052	PTRHD1	100	54.331	ENSOCUG00000015432	PTRHD1	82	56.897	Oryctolagus_cuniculus
ENSLACG00000018052	PTRHD1	92	65.812	ENSORLG00000028768	ptrhd1	88	70.192	Oryzias_latipes
ENSLACG00000018052	PTRHD1	92	65.812	ENSORLG00020002857	ptrhd1	88	70.192	Oryzias_latipes_hni
ENSLACG00000018052	PTRHD1	92	65.812	ENSORLG00015018271	ptrhd1	89	70.192	Oryzias_latipes_hsok
ENSLACG00000018052	PTRHD1	100	63.780	ENSOMEG00000017594	ptrhd1	90	67.544	Oryzias_melastigma
ENSLACG00000018052	PTRHD1	91	56.897	ENSOGAG00000000756	PTRHD1	75	60.000	Otolemur_garnettii
ENSLACG00000018052	PTRHD1	100	60.630	ENSOARG00000018052	PTRHD1	75	65.714	Ovis_aries
ENSLACG00000018052	PTRHD1	100	58.268	ENSPPAG00000035395	PTRHD1	82	60.345	Pan_paniscus
ENSLACG00000018052	PTRHD1	100	57.480	ENSPPRG00000022961	PTRHD1	82	59.483	Panthera_pardus
ENSLACG00000018052	PTRHD1	100	57.480	ENSPTIG00000012136	PTRHD1	82	59.483	Panthera_tigris_altaica
ENSLACG00000018052	PTRHD1	100	58.268	ENSPTRG00000011716	PTRHD1	82	60.345	Pan_troglodytes
ENSLACG00000018052	PTRHD1	100	57.480	ENSPANG00000006781	PTRHD1	82	60.345	Papio_anubis
ENSLACG00000018052	PTRHD1	100	69.048	ENSPKIG00000015207	ptrhd1	78	70.435	Paramormyrops_kingsleyae
ENSLACG00000018052	PTRHD1	92	69.828	ENSPMGG00000020297	ptrhd1	91	70.435	Periophthalmus_magnuspinnatus
ENSLACG00000018052	PTRHD1	90	67.257	ENSPMAG00000007352	ptrhd1	89	66.964	Petromyzon_marinus
ENSLACG00000018052	PTRHD1	91	57.759	ENSPCIG00000025242	PTRHD1	83	58.095	Phascolarctos_cinereus
ENSLACG00000018052	PTRHD1	100	69.048	ENSPFOG00000004468	ptrhd1	82	72.174	Poecilia_formosa
ENSLACG00000018052	PTRHD1	100	69.048	ENSPLAG00000018019	ptrhd1	91	72.174	Poecilia_latipinna
ENSLACG00000018052	PTRHD1	100	69.841	ENSPMEG00000001321	ptrhd1	91	73.043	Poecilia_mexicana
ENSLACG00000018052	PTRHD1	100	69.841	ENSPREG00000017624	ptrhd1	91	73.043	Poecilia_reticulata
ENSLACG00000018052	PTRHD1	100	59.843	ENSPPYG00000012597	PTRHD1	82	62.069	Pongo_abelii
ENSLACG00000018052	PTRHD1	91	57.759	ENSPCAG00000007535	PTRHD1	75	60.000	Procavia_capensis
ENSLACG00000018052	PTRHD1	91	61.207	ENSPCOG00000003110	PTRHD1	75	63.810	Propithecus_coquereli
ENSLACG00000018052	PTRHD1	100	58.268	ENSPVAG00000017514	PTRHD1	82	60.345	Pteropus_vampyrus
ENSLACG00000018052	PTRHD1	100	68.254	ENSPNYG00000016755	ptrhd1	91	72.174	Pundamilia_nyererei
ENSLACG00000018052	PTRHD1	100	70.866	ENSPNAG00000028214	ptrhd1	91	72.414	Pygocentrus_nattereri
ENSLACG00000018052	PTRHD1	95	56.800	ENSRNOG00000004059	Ptrhd1	81	58.772	Rattus_norvegicus
ENSLACG00000018052	PTRHD1	100	58.268	ENSRBIG00000032190	PTRHD1	82	60.345	Rhinopithecus_bieti
ENSLACG00000018052	PTRHD1	100	58.268	ENSRROG00000029627	PTRHD1	82	60.345	Rhinopithecus_roxellana
ENSLACG00000018052	PTRHD1	100	58.268	ENSSBOG00000031751	PTRHD1	82	60.345	Saimiri_boliviensis_boliviensis
ENSLACG00000018052	PTRHD1	91	56.034	ENSSHAG00000005774	PTRHD1	68	57.143	Sarcophilus_harrisii
ENSLACG00000018052	PTRHD1	96	66.942	ENSSFOG00015000526	ptrhd1	89	69.444	Scleropages_formosus
ENSLACG00000018052	PTRHD1	92	68.966	ENSSMAG00000004450	ptrhd1	91	70.690	Scophthalmus_maximus
ENSLACG00000018052	PTRHD1	100	67.460	ENSSDUG00000004610	ptrhd1	77	70.435	Seriola_dumerili
ENSLACG00000018052	PTRHD1	100	67.460	ENSSLDG00000006231	ptrhd1	91	70.435	Seriola_lalandi_dorsalis
ENSLACG00000018052	PTRHD1	91	66.379	ENSSPUG00000002905	PTRHD1	87	63.793	Sphenodon_punctatus
ENSLACG00000018052	PTRHD1	100	67.460	ENSSPAG00000000997	ptrhd1	91	71.304	Stegastes_partitus
ENSLACG00000018052	PTRHD1	77	51.546	ENSSSCG00000040441	-	72	53.333	Sus_scrofa
ENSLACG00000018052	PTRHD1	99	57.143	ENSTGUG00000015169	-	84	57.391	Taeniopygia_guttata
ENSLACG00000018052	PTRHD1	100	65.873	ENSTRUG00000007201	ptrhd1	91	68.696	Takifugu_rubripes
ENSLACG00000018052	PTRHD1	100	65.873	ENSTNIG00000019143	ptrhd1	91	68.696	Tetraodon_nigroviridis
ENSLACG00000018052	PTRHD1	100	55.906	ENSTTRG00000015128	PTRHD1	82	57.759	Tursiops_truncatus
ENSLACG00000018052	PTRHD1	91	57.759	ENSUAMG00000007305	PTRHD1	75	60.000	Ursus_americanus
ENSLACG00000018052	PTRHD1	100	56.693	ENSVPAG00000005556	PTRHD1	83	58.621	Vicugna_pacos
ENSLACG00000018052	PTRHD1	90	65.789	ENSXETG00000021176	ptrhd1	81	65.487	Xenopus_tropicalis
ENSLACG00000018052	PTRHD1	100	69.841	ENSXCOG00000019083	ptrhd1	91	73.043	Xiphophorus_couchianus
ENSLACG00000018052	PTRHD1	100	69.841	ENSXMAG00000024458	ptrhd1	91	73.043	Xiphophorus_maculatus