EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018136 (Gene tree)
Gene ID: 102345103
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 64969 bases
Position: chrJH126622.1:2789246-2854214
Accession: 14981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020640	PAP_RNA-bind	PF04926.15	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020781	PAPOLA-202	3204	XM_005990309	ENSLACP00000020641	324 (aa)	XP_005990371	H3BFH0
ENSLACT00000020780	PAPOLA-201	4737	-	ENSLACP00000020640	735 (aa)	-	H3BFG9

Gene Model

Click here to download ENSLACG00000018136's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018136	PAPOLA	99	54.194	ENSLACG00000009543	PAPOLG	99	54.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018136	PAPOLA	99	76.707	ENSG00000090060	PAPOLA	95	95.312	Homo_sapiens
ENSLACG00000018136	PAPOLA	100	77.078	ENSAMEG00000014142	PAPOLA	100	77.078	Ailuropoda_melanoleuca
ENSLACG00000018136	PAPOLA	100	76.107	ENSAPLG00000006645	PAPOLA	100	76.107	Anas_platyrhynchos
ENSLACG00000018136	PAPOLA	99	77.151	ENSACAG00000013474	PAPOLA	99	81.639	Anolis_carolinensis
ENSLACG00000018136	PAPOLA	99	76.975	ENSANAG00000018274	PAPOLA	99	85.897	Aotus_nancymaae
ENSLACG00000018136	PAPOLA	72	79.925	ENSANAG00000027941	-	98	79.925	Aotus_nancymaae
ENSLACG00000018136	PAPOLA	99	67.164	ENSAMXG00000018141	papola	97	80.882	Astyanax_mexicanus
ENSLACG00000018136	PAPOLA	99	77.341	ENSBTAG00000004054	PAPOLA	99	77.341	Bos_taurus
ENSLACG00000018136	PAPOLA	99	76.707	ENSCJAG00000006512	PAPOLA	99	85.897	Callithrix_jacchus
ENSLACG00000018136	PAPOLA	99	77.120	ENSCAFG00000017783	PAPOLA	99	77.120	Canis_familiaris
ENSLACG00000018136	PAPOLA	99	77.162	ENSCAFG00020011550	PAPOLA	99	85.658	Canis_lupus_dingo
ENSLACG00000018136	PAPOLA	99	77.341	ENSCHIG00000025004	-	97	83.117	Capra_hircus
ENSLACG00000018136	PAPOLA	99	77.524	ENSTSYG00000012384	PAPOLA	99	77.524	Carlito_syrichta
ENSLACG00000018136	PAPOLA	99	73.414	ENSCPOG00000002648	PAPOLA	99	73.414	Cavia_porcellus
ENSLACG00000018136	PAPOLA	99	76.841	ENSCCAG00000025120	PAPOLA	97	86.245	Cebus_capucinus
ENSLACG00000018136	PAPOLA	99	76.892	ENSCATG00000018815	PAPOLA	99	86.271	Cercocebus_atys
ENSLACG00000018136	PAPOLA	99	77.193	ENSCLAG00000016342	PAPOLA	99	77.193	Chinchilla_lanigera
ENSLACG00000018136	PAPOLA	99	76.841	ENSCSAG00000010516	PAPOLA	99	76.841	Chlorocebus_sabaeus
ENSLACG00000018136	PAPOLA	72	69.325	ENSCHOG00000001115	PAPOLA	71	69.325	Choloepus_hoffmanni
ENSLACG00000018136	PAPOLA	98	78.434	ENSCPBG00000024125	PAPOLA	99	78.167	Chrysemys_picta_bellii
ENSLACG00000018136	PAPOLA	99	71.754	ENSCANG00000000159	PAPOLA	99	71.754	Colobus_angolensis_palliatus
ENSLACG00000018136	PAPOLA	100	76.747	ENSCGRG00001022693	-	99	76.923	Cricetulus_griseus_chok1gshd
ENSLACG00000018136	PAPOLA	99	67.385	ENSCGRG00001002732	-	96	71.065	Cricetulus_griseus_chok1gshd
ENSLACG00000018136	PAPOLA	99	70.715	ENSCGRG00001000229	-	99	75.684	Cricetulus_griseus_chok1gshd
ENSLACG00000018136	PAPOLA	99	66.937	ENSCGRG00000000257	-	99	66.937	Cricetulus_griseus_crigri
ENSLACG00000018136	PAPOLA	98	64.802	ENSCGRG00000001888	-	96	65.348	Cricetulus_griseus_crigri
ENSLACG00000018136	PAPOLA	100	76.747	ENSCGRG00000003664	-	100	76.923	Cricetulus_griseus_crigri
ENSLACG00000018136	PAPOLA	66	49.800	ENSCSEG00000001841	-	89	44.610	Cynoglossus_semilaevis
ENSLACG00000018136	PAPOLA	99	67.571	ENSDARG00000009585	papola	99	67.571	Danio_rerio
ENSLACG00000018136	PAPOLA	66	67.886	ENSDORG00000013415	-	100	68.560	Dipodomys_ordii
ENSLACG00000018136	PAPOLA	99	67.385	ENSETEG00000004889	PAPOLA	100	67.385	Echinops_telfairi
ENSLACG00000018136	PAPOLA	98	64.342	ENSELUG00000018972	papola	98	64.211	Esox_lucius
ENSLACG00000018136	PAPOLA	99	77.328	ENSFCAG00000006784	PAPOLA	99	77.328	Felis_catus
ENSLACG00000018136	PAPOLA	100	73.307	ENSFALG00000002547	PAPOLA	98	73.307	Ficedula_albicollis
ENSLACG00000018136	PAPOLA	99	76.248	ENSFDAG00000010370	PAPOLA	100	76.248	Fukomys_damarensis
ENSLACG00000018136	PAPOLA	73	59.927	ENSGMOG00000010209	papola	100	60.291	Gadus_morhua
ENSLACG00000018136	PAPOLA	99	76.248	ENSGALG00000033099	PAPOLA	99	76.248	Gallus_gallus
ENSLACG00000018136	PAPOLA	65	51.037	ENSGACG00000006142	-	100	50.622	Gasterosteus_aculeatus
ENSLACG00000018136	PAPOLA	89	81.571	ENSGAGG00000020500	PAPOLA	99	81.571	Gopherus_agassizii
ENSLACG00000018136	PAPOLA	99	76.707	ENSGGOG00000006287	PAPOLA	97	79.592	Gorilla_gorilla
ENSLACG00000018136	PAPOLA	99	76.892	ENSHGLG00000007909	-	99	76.892	Heterocephalus_glaber_female
ENSLACG00000018136	PAPOLA	99	67.164	ENSHGLG00000017457	-	99	67.164	Heterocephalus_glaber_female
ENSLACG00000018136	PAPOLA	92	76.522	ENSHGLG00000007467	-	99	76.522	Heterocephalus_glaber_female
ENSLACG00000018136	PAPOLA	99	77.007	ENSHGLG00100017273	PAPOLA	99	77.007	Heterocephalus_glaber_male
ENSLACG00000018136	PAPOLA	99	62.767	ENSIPUG00000005919	papola	99	62.767	Ictalurus_punctatus
ENSLACG00000018136	PAPOLA	99	77.598	ENSSTOG00000011471	PAPOLA	99	77.598	Ictidomys_tridecemlineatus
ENSLACG00000018136	PAPOLA	99	76.383	ENSJJAG00000024340	Papola	100	76.383	Jaculus_jaculus
ENSLACG00000018136	PAPOLA	99	64.753	ENSLOCG00000008632	papola	99	65.200	Lepisosteus_oculatus
ENSLACG00000018136	PAPOLA	99	77.120	ENSLAFG00000000946	PAPOLA	99	77.120	Loxodonta_africana
ENSLACG00000018136	PAPOLA	99	76.841	ENSMFAG00000001792	PAPOLA	99	86.004	Macaca_fascicularis
ENSLACG00000018136	PAPOLA	99	76.841	ENSMMUG00000018610	PAPOLA	99	76.841	Macaca_mulatta
ENSLACG00000018136	PAPOLA	99	76.892	ENSMNEG00000043747	PAPOLA	98	86.406	Macaca_nemestrina
ENSLACG00000018136	PAPOLA	99	76.841	ENSMLEG00000032066	PAPOLA	99	76.841	Mandrillus_leucophaeus
ENSLACG00000018136	PAPOLA	84	74.880	ENSMGAG00000013228	-	100	74.880	Meleagris_gallopavo
ENSLACG00000018136	PAPOLA	99	77.058	ENSMAUG00000017178	Papola	99	77.058	Mesocricetus_auratus
ENSLACG00000018136	PAPOLA	99	77.463	ENSMICG00000010347	PAPOLA	98	85.952	Microcebus_murinus
ENSLACG00000018136	PAPOLA	99	77.389	ENSMOCG00000021670	Papola	99	77.389	Microtus_ochrogaster
ENSLACG00000018136	PAPOLA	99	67.608	ENSMODG00000001969	-	99	67.742	Monodelphis_domestica
ENSLACG00000018136	PAPOLA	99	77.598	ENSMODG00000012887	-	99	77.598	Monodelphis_domestica
ENSLACG00000018136	PAPOLA	99	76.518	MGP_CAROLIEiJ_G0018093	Papola	99	76.518	Mus_caroli
ENSLACG00000018136	PAPOLA	99	76.653	ENSMUSG00000021111	Papola	99	76.653	Mus_musculus
ENSLACG00000018136	PAPOLA	99	76.653	MGP_PahariEiJ_G0029850	Papola	99	76.653	Mus_pahari
ENSLACG00000018136	PAPOLA	99	76.518	MGP_SPRETEiJ_G0018943	Papola	99	76.518	Mus_spretus
ENSLACG00000018136	PAPOLA	99	77.463	ENSMPUG00000003054	PAPOLA	99	77.463	Mustela_putorius_furo
ENSLACG00000018136	PAPOLA	99	77.058	ENSMLUG00000010922	PAPOLA	99	77.058	Myotis_lucifugus
ENSLACG00000018136	PAPOLA	99	77.432	ENSNGAG00000022172	Papola	100	77.432	Nannospalax_galili
ENSLACG00000018136	PAPOLA	99	72.751	ENSNLEG00000000625	PAPOLA	99	72.751	Nomascus_leucogenys
ENSLACG00000018136	PAPOLA	66	51.801	ENSMEUG00000007831	-	74	51.801	Notamacropus_eugenii
ENSLACG00000018136	PAPOLA	97	73.278	ENSOPRG00000007625	PAPOLA	100	73.278	Ochotona_princeps
ENSLACG00000018136	PAPOLA	64	50.837	ENSONIG00000001062	-	96	50.837	Oreochromis_niloticus
ENSLACG00000018136	PAPOLA	100	75.941	ENSOANG00000013812	PAPOLA	99	75.941	Ornithorhynchus_anatinus
ENSLACG00000018136	PAPOLA	100	74.765	ENSOCUG00000011531	PAPOLA	100	74.765	Oryctolagus_cuniculus
ENSLACG00000018136	PAPOLA	99	77.358	ENSOGAG00000004611	PAPOLA	99	77.358	Otolemur_garnettii
ENSLACG00000018136	PAPOLA	99	77.089	ENSOARG00000016579	-	99	77.058	Ovis_aries
ENSLACG00000018136	PAPOLA	99	76.707	ENSPPAG00000030505	PAPOLA	98	82.931	Pan_paniscus
ENSLACG00000018136	PAPOLA	99	77.328	ENSPPRG00000008616	PAPOLA	99	77.328	Panthera_pardus
ENSLACG00000018136	PAPOLA	99	77.328	ENSPTIG00000018852	PAPOLA	99	77.328	Panthera_tigris_altaica
ENSLACG00000018136	PAPOLA	99	76.707	ENSPTRG00000006704	PAPOLA	99	76.707	Pan_troglodytes
ENSLACG00000018136	PAPOLA	99	76.985	ENSPANG00000025582	PAPOLA	98	86.271	Papio_anubis
ENSLACG00000018136	PAPOLA	99	63.911	ENSPKIG00000014471	papola	99	65.092	Paramormyrops_kingsleyae
ENSLACG00000018136	PAPOLA	98	77.885	ENSPSIG00000014157	PAPOLA	86	77.628	Pelodiscus_sinensis
ENSLACG00000018136	PAPOLA	99	77.058	ENSPEMG00000000043	Papola	99	77.058	Peromyscus_maniculatus_bairdii
ENSLACG00000018136	PAPOLA	99	77.493	ENSPCIG00000013234	PAPOLA	99	79.883	Phascolarctos_cinereus
ENSLACG00000018136	PAPOLA	99	74.866	ENSPPYG00000006128	PAPOLA	99	74.866	Pongo_abelii
ENSLACG00000018136	PAPOLA	89	75.378	ENSPCAG00000004199	PAPOLA	100	75.378	Procavia_capensis
ENSLACG00000018136	PAPOLA	99	74.359	ENSPCOG00000022117	PAPOLA	98	81.181	Propithecus_coquereli
ENSLACG00000018136	PAPOLA	99	76.788	ENSPVAG00000013925	PAPOLA	99	76.788	Pteropus_vampyrus
ENSLACG00000018136	PAPOLA	99	65.986	ENSPNAG00000010467	papola	99	66.122	Pygocentrus_nattereri
ENSLACG00000018136	PAPOLA	99	76.653	ENSRNOG00000004827	Papola	99	76.653	Rattus_norvegicus
ENSLACG00000018136	PAPOLA	99	76.203	ENSRBIG00000038490	PAPOLA	98	85.261	Rhinopithecus_bieti
ENSLACG00000018136	PAPOLA	99	76.841	ENSRROG00000025545	PAPOLA	99	76.841	Rhinopithecus_roxellana
ENSLACG00000018136	PAPOLA	99	76.757	ENSSBOG00000024061	PAPOLA	97	86.116	Saimiri_boliviensis_boliviensis
ENSLACG00000018136	PAPOLA	100	77.285	ENSSHAG00000015211	PAPOLA	100	77.285	Sarcophilus_harrisii
ENSLACG00000018136	PAPOLA	98	65.287	ENSSFOG00015004431	papola	100	78.636	Scleropages_formosus
ENSLACG00000018136	PAPOLA	98	42.896	ENSSDUG00000018247	-	97	42.896	Seriola_dumerili
ENSLACG00000018136	PAPOLA	99	78.167	ENSSPUG00000005835	PAPOLA	99	78.167	Sphenodon_punctatus
ENSLACG00000018136	PAPOLA	99	76.923	ENSSSCG00000002505	-	99	76.923	Sus_scrofa
ENSLACG00000018136	PAPOLA	99	76.011	ENSTGUG00000012687	PAPOLA	100	76.011	Taeniopygia_guttata
ENSLACG00000018136	PAPOLA	75	75.946	ENSTBEG00000000194	PAPOLA	75	75.946	Tupaia_belangeri
ENSLACG00000018136	PAPOLA	80	76.834	ENSTTRG00000005717	PAPOLA	80	76.834	Tursiops_truncatus
ENSLACG00000018136	PAPOLA	57	85.480	ENSUAMG00000025737	PAPOLA	99	85.480	Ursus_americanus
ENSLACG00000018136	PAPOLA	99	77.058	ENSVPAG00000006464	PAPOLA	100	77.058	Vicugna_pacos
ENSLACG00000018136	PAPOLA	99	77.193	ENSVVUG00000028340	PAPOLA	99	77.193	Vulpes_vulpes
ENSLACG00000018136	PAPOLA	99	75.304	ENSXETG00000013949	papola	99	75.304	Xenopus_tropicalis