EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018188 (Gene tree)
Gene ID: 102356711
Gene Symbol: POP5
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 5762 bases
Position: chrJH126570.1:2869653-2875414
Accession: 102356711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020699	RNase_P_Rpp14	PF01900.19	7e-29	1	1
ENSLACP00000020700	RNase_P_Rpp14	PF01900.19	7.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020840	POP5-202	489	-	ENSLACP00000020700	162 (aa)	-	H3BFM9
ENSLACT00000020839	POP5-201	2441	XM_005987151	ENSLACP00000020699	160 (aa)	XP_005987213	H3BFM8

Gene Model

Click here to download ENSLACG00000018188's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018188	POP5	88	64.789	ENSG00000167272	POP5	100	60.736	Homo_sapiens
ENSLACG00000018188	POP5	92	52.703	ENSAPOG00000023686	POP5	99	49.697	Acanthochromis_polyacanthus
ENSLACG00000018188	POP5	98	60.000	ENSAMEG00000008503	POP5	92	60.000	Ailuropoda_melanoleuca
ENSLACG00000018188	POP5	91	56.000	ENSACIG00000018362	pop5	99	52.976	Amphilophus_citrinellus
ENSLACG00000018188	POP5	92	52.703	ENSAOCG00000001930	pop5	99	49.697	Amphiprion_ocellaris
ENSLACG00000018188	POP5	92	52.703	ENSAPEG00000006795	pop5	99	49.697	Amphiprion_percula
ENSLACG00000018188	POP5	91	54.422	ENSATEG00000016792	pop5	99	51.190	Anabas_testudineus
ENSLACG00000018188	POP5	59	71.277	ENSAPLG00000015761	POP5	99	65.421	Anas_platyrhynchos
ENSLACG00000018188	POP5	99	55.625	ENSACAG00000003091	POP5	95	55.625	Anolis_carolinensis
ENSLACG00000018188	POP5	88	64.085	ENSANAG00000023744	POP5	100	60.123	Aotus_nancymaae
ENSLACG00000018188	POP5	91	54.667	ENSACLG00000021131	-	98	52.096	Astatotilapia_calliptera
ENSLACG00000018188	POP5	94	50.658	ENSAMXG00000038175	pop5	93	49.375	Astyanax_mexicanus
ENSLACG00000018188	POP5	98	62.658	ENSBTAG00000005385	POP5	92	62.658	Bos_taurus
ENSLACG00000018188	POP5	88	64.789	ENSCJAG00000001309	POP5	100	60.736	Callithrix_jacchus
ENSLACG00000018188	POP5	98	60.127	ENSCAFG00000010389	POP5	92	60.127	Canis_familiaris
ENSLACG00000018188	POP5	98	60.127	ENSCAFG00020020663	POP5	92	60.127	Canis_lupus_dingo
ENSLACG00000018188	POP5	98	62.658	ENSCHIG00000016402	POP5	92	62.658	Capra_hircus
ENSLACG00000018188	POP5	88	63.380	ENSTSYG00000027616	POP5	93	60.000	Carlito_syrichta
ENSLACG00000018188	POP5	66	67.619	ENSCAPG00000016873	POP5	94	65.741	Cavia_aperea
ENSLACG00000018188	POP5	99	58.750	ENSCPOG00000012337	POP5	96	57.669	Cavia_porcellus
ENSLACG00000018188	POP5	88	64.085	ENSCCAG00000023154	POP5	100	59.509	Cebus_capucinus
ENSLACG00000018188	POP5	88	64.789	ENSCATG00000036825	POP5	100	60.123	Cercocebus_atys
ENSLACG00000018188	POP5	99	60.000	ENSCLAG00000007808	POP5	93	60.000	Chinchilla_lanigera
ENSLACG00000018188	POP5	88	64.789	ENSCSAG00000002246	POP5	100	60.736	Chlorocebus_sabaeus
ENSLACG00000018188	POP5	91	56.849	ENSCHOG00000013969	POP5	93	55.625	Choloepus_hoffmanni
ENSLACG00000018188	POP5	99	66.049	ENSCPBG00000011331	POP5	96	66.049	Chrysemys_picta_bellii
ENSLACG00000018188	POP5	88	64.789	ENSCANG00000028001	POP5	100	60.736	Colobus_angolensis_palliatus
ENSLACG00000018188	POP5	98	61.392	ENSCGRG00001017974	Pop5	92	61.392	Cricetulus_griseus_chok1gshd
ENSLACG00000018188	POP5	98	61.392	ENSCGRG00000010102	Pop5	92	61.392	Cricetulus_griseus_crigri
ENSLACG00000018188	POP5	91	53.741	ENSCSEG00000008332	-	98	51.534	Cynoglossus_semilaevis
ENSLACG00000018188	POP5	85	55.474	ENSCSEG00000011103	pop5	91	55.474	Cynoglossus_semilaevis
ENSLACG00000018188	POP5	91	36.301	ENSCVAG00000009152	-	87	36.486	Cyprinodon_variegatus
ENSLACG00000018188	POP5	94	55.556	ENSDARG00000053452	pop5	98	53.012	Danio_rerio
ENSLACG00000018188	POP5	88	63.194	ENSDNOG00000012668	-	83	61.250	Dasypus_novemcinctus
ENSLACG00000018188	POP5	88	64.789	ENSDNOG00000045952	-	92	62.658	Dasypus_novemcinctus
ENSLACG00000018188	POP5	88	62.676	ENSDORG00000029401	Pop5	96	57.669	Dipodomys_ordii
ENSLACG00000018188	POP5	99	58.750	ENSETEG00000009283	POP5	93	58.750	Echinops_telfairi
ENSLACG00000018188	POP5	88	40.845	ENSEBUG00000016369	pop5	87	40.845	Eptatretus_burgeri
ENSLACG00000018188	POP5	88	64.085	ENSEASG00005004714	POP5	92	61.392	Equus_asinus_asinus
ENSLACG00000018188	POP5	88	64.085	ENSECAG00000010012	POP5	92	61.392	Equus_caballus
ENSLACG00000018188	POP5	99	55.625	ENSELUG00000023394	pop5	98	55.346	Esox_lucius
ENSLACG00000018188	POP5	98	60.127	ENSFCAG00000042614	POP5	93	59.375	Felis_catus
ENSLACG00000018188	POP5	91	63.946	ENSFALG00000007537	POP5	96	61.250	Ficedula_albicollis
ENSLACG00000018188	POP5	88	64.085	ENSFDAG00000009972	POP5	94	60.000	Fukomys_damarensis
ENSLACG00000018188	POP5	100	52.410	ENSFHEG00000022341	pop5	98	52.410	Fundulus_heteroclitus
ENSLACG00000018188	POP5	81	52.672	ENSGMOG00000001073	pop5	99	52.672	Gadus_morhua
ENSLACG00000018188	POP5	88	63.830	ENSGALG00000007124	POP5	55	60.390	Gallus_gallus
ENSLACG00000018188	POP5	91	54.422	ENSGAFG00000005937	-	99	52.121	Gambusia_affinis
ENSLACG00000018188	POP5	91	53.741	ENSGACG00000012710	-	90	53.741	Gasterosteus_aculeatus
ENSLACG00000018188	POP5	99	65.432	ENSGAGG00000016005	POP5	96	65.432	Gopherus_agassizii
ENSLACG00000018188	POP5	88	64.789	ENSGGOG00000013505	POP5	100	60.736	Gorilla_gorilla
ENSLACG00000018188	POP5	91	55.333	ENSHBUG00000011718	-	98	52.695	Haplochromis_burtoni
ENSLACG00000018188	POP5	88	63.380	ENSHGLG00000011786	POP5	85	63.380	Heterocephalus_glaber_female
ENSLACG00000018188	POP5	88	63.380	ENSHGLG00100014284	POP5	85	63.380	Heterocephalus_glaber_male
ENSLACG00000018188	POP5	91	53.333	ENSHCOG00000011809	pop5	90	53.333	Hippocampus_comes
ENSLACG00000018188	POP5	92	48.649	ENSIPUG00000003437	pop5	95	46.875	Ictalurus_punctatus
ENSLACG00000018188	POP5	99	59.375	ENSSTOG00000012577	POP5	100	56.805	Ictidomys_tridecemlineatus
ENSLACG00000018188	POP5	88	64.085	ENSJJAG00000001080	Pop5	92	62.264	Jaculus_jaculus
ENSLACG00000018188	POP5	91	53.741	ENSKMAG00000011158	-	97	50.303	Kryptolebias_marmoratus
ENSLACG00000018188	POP5	100	51.829	ENSLBEG00000008652	pop5	89	50.602	Labrus_bergylta
ENSLACG00000018188	POP5	92	58.108	ENSLOCG00000002924	pop5	95	56.875	Lepisosteus_oculatus
ENSLACG00000018188	POP5	99	61.111	ENSLAFG00000014545	POP5	100	59.649	Loxodonta_africana
ENSLACG00000018188	POP5	88	64.789	ENSMFAG00000045933	POP5	100	60.736	Macaca_fascicularis
ENSLACG00000018188	POP5	88	64.789	ENSMMUG00000040120	POP5	100	60.736	Macaca_mulatta
ENSLACG00000018188	POP5	88	64.789	ENSMNEG00000041716	POP5	100	60.736	Macaca_nemestrina
ENSLACG00000018188	POP5	88	64.085	ENSMLEG00000029377	POP5	100	60.123	Mandrillus_leucophaeus
ENSLACG00000018188	POP5	91	55.102	ENSMAMG00000002108	pop5	99	50.909	Mastacembelus_armatus
ENSLACG00000018188	POP5	91	54.667	ENSMZEG00005000069	-	98	52.096	Maylandia_zebra
ENSLACG00000018188	POP5	98	60.759	ENSMAUG00000019670	Pop5	92	60.759	Mesocricetus_auratus
ENSLACG00000018188	POP5	98	55.422	ENSMICG00000008692	POP5	92	61.392	Microcebus_murinus
ENSLACG00000018188	POP5	88	58.865	ENSMOCG00000013322	Pop5	83	58.865	Microtus_ochrogaster
ENSLACG00000018188	POP5	88	54.861	ENSMMOG00000010471	pop5	94	52.564	Mola_mola
ENSLACG00000018188	POP5	100	65.269	ENSMODG00000003066	POP5	68	65.269	Monodelphis_domestica
ENSLACG00000018188	POP5	91	54.000	ENSMALG00000017797	-	98	51.497	Monopterus_albus
ENSLACG00000018188	POP5	88	64.085	MGP_CAROLIEiJ_G0027618	Pop5	84	64.085	Mus_caroli
ENSLACG00000018188	POP5	88	64.085	ENSMUSG00000060152	Pop5	84	64.085	Mus_musculus
ENSLACG00000018188	POP5	88	63.380	MGP_PahariEiJ_G0024198	Pop5	84	63.380	Mus_pahari
ENSLACG00000018188	POP5	88	64.789	MGP_SPRETEiJ_G0028616	Pop5	84	64.789	Mus_spretus
ENSLACG00000018188	POP5	88	61.268	ENSMPUG00000003221	POP5	92	58.599	Mustela_putorius_furo
ENSLACG00000018188	POP5	88	62.500	ENSMLUG00000014657	POP5	98	58.788	Myotis_lucifugus
ENSLACG00000018188	POP5	88	65.493	ENSNGAG00000002594	Pop5	92	61.875	Nannospalax_galili
ENSLACG00000018188	POP5	69	50.435	ENSNBRG00000001020	-	83	50.435	Neolamprologus_brichardi
ENSLACG00000018188	POP5	88	64.789	ENSNLEG00000015839	POP5	100	60.976	Nomascus_leucogenys
ENSLACG00000018188	POP5	99	66.250	ENSMEUG00000015288	POP5	100	65.644	Notamacropus_eugenii
ENSLACG00000018188	POP5	88	64.789	ENSOPRG00000004327	POP5	92	62.025	Ochotona_princeps
ENSLACG00000018188	POP5	99	55.556	ENSODEG00000010351	-	100	55.556	Octodon_degus
ENSLACG00000018188	POP5	88	63.380	ENSODEG00000006549	-	93	60.000	Octodon_degus
ENSLACG00000018188	POP5	91	55.333	ENSONIG00000011172	pop5	98	52.096	Oreochromis_niloticus
ENSLACG00000018188	POP5	57	73.626	ENSOANG00000001792	-	92	66.667	Ornithorhynchus_anatinus
ENSLACG00000018188	POP5	88	64.789	ENSOCUG00000006537	POP5	92	61.250	Oryctolagus_cuniculus
ENSLACG00000018188	POP5	90	51.724	ENSORLG00000014745	pop5	87	51.724	Oryzias_latipes
ENSLACG00000018188	POP5	99	47.273	ENSORLG00020001168	pop5	87	51.034	Oryzias_latipes_hni
ENSLACG00000018188	POP5	99	46.108	ENSORLG00015013535	pop5	87	49.660	Oryzias_latipes_hsok
ENSLACG00000018188	POP5	91	51.701	ENSOMEG00000017643	pop5	88	51.701	Oryzias_melastigma
ENSLACG00000018188	POP5	96	61.688	ENSOGAG00000008528	POP5	93	61.688	Otolemur_garnettii
ENSLACG00000018188	POP5	98	61.875	ENSOARG00000012764	POP5	92	61.875	Ovis_aries
ENSLACG00000018188	POP5	88	64.789	ENSPPAG00000043719	POP5	100	60.736	Pan_paniscus
ENSLACG00000018188	POP5	98	60.127	ENSPPRG00000006474	POP5	93	59.375	Panthera_pardus
ENSLACG00000018188	POP5	98	60.127	ENSPTIG00000012194	POP5	93	59.375	Panthera_tigris_altaica
ENSLACG00000018188	POP5	88	64.789	ENSPTRG00000005543	POP5	100	60.736	Pan_troglodytes
ENSLACG00000018188	POP5	88	64.789	ENSPANG00000014166	POP5	100	60.736	Papio_anubis
ENSLACG00000018188	POP5	92	55.405	ENSPKIG00000025154	pop5	96	52.830	Paramormyrops_kingsleyae
ENSLACG00000018188	POP5	66	72.642	ENSPSIG00000013154	POP5	85	72.642	Pelodiscus_sinensis
ENSLACG00000018188	POP5	99	46.951	ENSPMGG00000000812	-	99	47.904	Periophthalmus_magnuspinnatus
ENSLACG00000018188	POP5	88	62.676	ENSPEMG00000017493	Pop5	84	62.676	Peromyscus_maniculatus_bairdii
ENSLACG00000018188	POP5	91	54.730	ENSPFOG00000013000	pop5	99	53.012	Poecilia_formosa
ENSLACG00000018188	POP5	91	54.422	ENSPLAG00000014070	pop5	99	52.727	Poecilia_latipinna
ENSLACG00000018188	POP5	91	53.741	ENSPMEG00000024039	pop5	99	50.909	Poecilia_mexicana
ENSLACG00000018188	POP5	91	53.741	ENSPMEG00000012863	POP5	99	50.909	Poecilia_mexicana
ENSLACG00000018188	POP5	91	53.061	ENSPREG00000020151	pop5	99	51.515	Poecilia_reticulata
ENSLACG00000018188	POP5	88	64.085	ENSPPYG00000005036	POP5	84	60.123	Pongo_abelii
ENSLACG00000018188	POP5	64	62.500	ENSPCAG00000004788	POP5	100	62.500	Procavia_capensis
ENSLACG00000018188	POP5	88	64.085	ENSPCOG00000017618	POP5	92	61.392	Propithecus_coquereli
ENSLACG00000018188	POP5	88	63.380	ENSPVAG00000002233	POP5	92	60.759	Pteropus_vampyrus
ENSLACG00000018188	POP5	91	55.333	ENSPNYG00000002679	pop5	98	52.695	Pundamilia_nyererei
ENSLACG00000018188	POP5	91	48.630	ENSPNAG00000012662	pop5	90	45.000	Pygocentrus_nattereri
ENSLACG00000018188	POP5	98	60.127	ENSRNOG00000001199	Pop5	100	56.805	Rattus_norvegicus
ENSLACG00000018188	POP5	88	64.085	ENSRBIG00000043505	POP5	99	61.538	Rhinopithecus_bieti
ENSLACG00000018188	POP5	88	64.085	ENSRROG00000045063	POP5	99	61.538	Rhinopithecus_roxellana
ENSLACG00000018188	POP5	88	64.789	ENSSBOG00000032691	POP5	99	64.706	Saimiri_boliviensis_boliviensis
ENSLACG00000018188	POP5	93	61.184	ENSSFOG00015005630	pop5	96	58.282	Scleropages_formosus
ENSLACG00000018188	POP5	91	53.289	ENSSMAG00000018868	pop5	99	49.412	Scophthalmus_maximus
ENSLACG00000018188	POP5	99	51.190	ENSSDUG00000001282	-	99	51.190	Seriola_dumerili
ENSLACG00000018188	POP5	99	51.786	ENSSLDG00000003801	-	99	51.786	Seriola_lalandi_dorsalis
ENSLACG00000018188	POP5	99	51.786	ENSSLDG00000017031	pop5	99	51.786	Seriola_lalandi_dorsalis
ENSLACG00000018188	POP5	64	60.577	ENSSARG00000005564	POP5	64	60.577	Sorex_araneus
ENSLACG00000018188	POP5	92	67.568	ENSSPUG00000015531	POP5	97	65.031	Sphenodon_punctatus
ENSLACG00000018188	POP5	91	55.782	ENSSPAG00000015306	pop5	99	52.121	Stegastes_partitus
ENSLACG00000018188	POP5	98	63.924	ENSSSCG00000009912	POP5	92	63.924	Sus_scrofa
ENSLACG00000018188	POP5	99	61.875	ENSTGUG00000009602	POP5	98	61.875	Taeniopygia_guttata
ENSLACG00000018188	POP5	91	57.823	ENSTRUG00000016214	pop5	89	57.823	Takifugu_rubripes
ENSLACG00000018188	POP5	88	55.172	ENSTNIG00000011465	pop5	85	55.172	Tetraodon_nigroviridis
ENSLACG00000018188	POP5	88	66.901	ENSTBEG00000010131	POP5	93	63.125	Tupaia_belangeri
ENSLACG00000018188	POP5	98	62.025	ENSTTRG00000000153	POP5	92	62.025	Tursiops_truncatus
ENSLACG00000018188	POP5	97	58.974	ENSUAMG00000015541	POP5	71	58.974	Ursus_americanus
ENSLACG00000018188	POP5	98	60.759	ENSUMAG00000006137	POP5	93	60.000	Ursus_maritimus
ENSLACG00000018188	POP5	98	62.025	ENSVPAG00000010365	POP5	92	62.025	Vicugna_pacos
ENSLACG00000018188	POP5	98	60.127	ENSVVUG00000021154	POP5	92	60.127	Vulpes_vulpes
ENSLACG00000018188	POP5	63	67.327	ENSXETG00000031793	POP5	89	67.327	Xenopus_tropicalis
ENSLACG00000018188	POP5	91	54.422	ENSXMAG00000003508	-	86	52.121	Xiphophorus_maculatus