EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018221 (Gene tree)
Gene ID: 102352914
Gene Symbol: CHERP
Alias: DAN16|ERPROT213-21
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 23615 bases
Position: chrJH126613.1:2910862-2934476
Accession: 102352914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023037	Surp	PF01805.20	5.7e-17	1	1
ENSLACP00000020738	Surp	PF01805.20	5.7e-17	1	1
ENSLACP00000020739	G-patch	PF01585.23	7.6e-13	1	1
ENSLACP00000020738	G-patch	PF01585.23	9.1e-13	1	1
ENSLACP00000023037	G-patch	PF01585.23	9.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020879	CHERP-203	5528	-	ENSLACP00000020739	835 (aa)	-	H3BFR8
ENSLACT00000020878	CHERP-202	2826	-	ENSLACP00000020738	942 (aa)	-	H3BFR7
ENSLACT00000026610	CHERP-201	3298	XM_005989903	ENSLACP00000023037	942 (aa)	XP_005989965	M3XJY1

Gene Model

Click here to download ENSLACG00000018221's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018221	CHERP	80	78.864	ENSG00000085872	CHERP	99	79.979	Homo_sapiens
ENSLACG00000018221	CHERP	65	61.552	ENSAPOG00000009646	cherp	98	62.434	Acanthochromis_polyacanthus
ENSLACG00000018221	CHERP	98	76.452	ENSAMEG00000010048	CHERP	79	78.849	Ailuropoda_melanoleuca
ENSLACG00000018221	CHERP	99	63.929	ENSACIG00000019242	cherp	80	66.925	Amphilophus_citrinellus
ENSLACG00000018221	CHERP	100	63.420	ENSAOCG00000017846	cherp	79	66.839	Amphiprion_ocellaris
ENSLACG00000018221	CHERP	80	86.190	ENSAPEG00000021128	cherp	97	61.416	Amphiprion_percula
ENSLACG00000018221	CHERP	100	64.033	ENSATEG00000006341	cherp	79	67.405	Anabas_testudineus
ENSLACG00000018221	CHERP	75	78.807	ENSAPLG00000010773	CHERP	78	78.386	Anas_platyrhynchos
ENSLACG00000018221	CHERP	54	76.842	ENSACAG00000011583	CHERP	61	81.507	Anolis_carolinensis
ENSLACG00000018221	CHERP	99	69.652	ENSANAG00000024284	CHERP	99	78.947	Aotus_nancymaae
ENSLACG00000018221	CHERP	80	85.780	ENSACLG00000020053	cherp	79	66.840	Astatotilapia_calliptera
ENSLACG00000018221	CHERP	100	65.676	ENSAMXG00000021637	cherp	75	68.710	Astyanax_mexicanus
ENSLACG00000018221	CHERP	99	79.979	ENSBTAG00000005289	CHERP	99	79.979	Bos_taurus
ENSLACG00000018221	CHERP	80	77.604	ENSCJAG00000040462	CHERP	99	78.947	Callithrix_jacchus
ENSLACG00000018221	CHERP	79	79.073	ENSCAFG00000015671	CHERP	99	80.298	Canis_familiaris
ENSLACG00000018221	CHERP	85	90.000	ENSCAFG00020009941	CHERP	99	79.368	Canis_lupus_dingo
ENSLACG00000018221	CHERP	99	73.511	ENSCHIG00000013765	CHERP	96	81.915	Capra_hircus
ENSLACG00000018221	CHERP	97	74.146	ENSCAPG00000000910	CHERP	72	78.726	Cavia_aperea
ENSLACG00000018221	CHERP	100	80.126	ENSCPOG00000019949	CHERP	100	80.547	Cavia_porcellus
ENSLACG00000018221	CHERP	80	77.604	ENSCCAG00000031534	CHERP	99	78.947	Cebus_capucinus
ENSLACG00000018221	CHERP	80	77.865	ENSCATG00000031409	CHERP	99	79.263	Cercocebus_atys
ENSLACG00000018221	CHERP	63	83.488	ENSCLAG00000005484	CHERP	99	76.693	Chinchilla_lanigera
ENSLACG00000018221	CHERP	80	78.996	ENSCSAG00000005740	CHERP	99	80.085	Chlorocebus_sabaeus
ENSLACG00000018221	CHERP	100	78.458	ENSCPBG00000014970	CHERP	80	79.255	Chrysemys_picta_bellii
ENSLACG00000018221	CHERP	73	53.276	ENSCING00000004814	-	60	55.921	Ciona_intestinalis
ENSLACG00000018221	CHERP	55	56.579	ENSCSAVG00000002455	-	55	57.241	Ciona_savignyi
ENSLACG00000018221	CHERP	80	78.996	ENSCANG00000032053	CHERP	99	80.085	Colobus_angolensis_palliatus
ENSLACG00000018221	CHERP	80	76.783	ENSCGRG00001023316	Cherp	100	79.896	Cricetulus_griseus_chok1gshd
ENSLACG00000018221	CHERP	79	77.984	ENSCGRG00000015901	Cherp	99	81.197	Cricetulus_griseus_crigri
ENSLACG00000018221	CHERP	80	65.548	ENSCSEG00000019700	cherp	100	62.181	Cynoglossus_semilaevis
ENSLACG00000018221	CHERP	76	64.141	ENSCVAG00000003622	cherp	93	64.642	Cyprinodon_variegatus
ENSLACG00000018221	CHERP	99	64.762	ENSDARG00000021812	cherp	100	76.226	Danio_rerio
ENSLACG00000018221	CHERP	98	73.369	ENSDORG00000027623	Cherp	100	76.702	Dipodomys_ordii
ENSLACG00000018221	CHERP	62	60.000	FBgn0261872	scaf6	56	60.000	Drosophila_melanogaster
ENSLACG00000018221	CHERP	76	88.571	ENSETEG00000019543	CHERP	83	81.696	Echinops_telfairi
ENSLACG00000018221	CHERP	59	60.751	ENSEBUG00000009109	cherp	56	68.493	Eptatretus_burgeri
ENSLACG00000018221	CHERP	79	78.543	ENSEASG00005000428	CHERP	92	79.979	Equus_asinus_asinus
ENSLACG00000018221	CHERP	79	78.411	ENSECAG00000012713	CHERP	99	79.872	Equus_caballus
ENSLACG00000018221	CHERP	80	65.548	ENSELUG00000023026	cherp	80	66.968	Esox_lucius
ENSLACG00000018221	CHERP	79	75.196	ENSFCAG00000013172	CHERP	99	78.743	Felis_catus
ENSLACG00000018221	CHERP	80	79.681	ENSFALG00000013410	CHERP	69	80.027	Ficedula_albicollis
ENSLACG00000018221	CHERP	97	72.834	ENSFDAG00000015981	CHERP	100	72.370	Fukomys_damarensis
ENSLACG00000018221	CHERP	88	77.174	ENSFHEG00000009720	cherp	79	59.555	Fundulus_heteroclitus
ENSLACG00000018221	CHERP	79	63.007	ENSGMOG00000008654	cherp	79	64.744	Gadus_morhua
ENSLACG00000018221	CHERP	80	78.828	ENSGALG00000003824	CHERP	70	79.494	Gallus_gallus
ENSLACG00000018221	CHERP	100	63.318	ENSGACG00000002053	cherp	78	63.953	Gasterosteus_aculeatus
ENSLACG00000018221	CHERP	100	78.036	ENSGAGG00000014208	CHERP	80	79.122	Gopherus_agassizii
ENSLACG00000018221	CHERP	75	63.020	ENSGGOG00000016348	CHERP	99	69.762	Gorilla_gorilla
ENSLACG00000018221	CHERP	80	85.780	ENSHBUG00000007405	cherp	79	67.057	Haplochromis_burtoni
ENSLACG00000018221	CHERP	80	76.548	ENSHGLG00000002993	CHERP	100	78.556	Heterocephalus_glaber_female
ENSLACG00000018221	CHERP	80	65.370	ENSHCOG00000007691	cherp	79	64.789	Hippocampus_comes
ENSLACG00000018221	CHERP	99	66.807	ENSIPUG00000025008	cherp	79	68.538	Ictalurus_punctatus
ENSLACG00000018221	CHERP	98	80.086	ENSSTOG00000012089	CHERP	99	80.947	Ictidomys_tridecemlineatus
ENSLACG00000018221	CHERP	97	72.249	ENSJJAG00000017982	Cherp	81	78.562	Jaculus_jaculus
ENSLACG00000018221	CHERP	100	62.978	ENSKMAG00000009101	cherp	79	66.148	Kryptolebias_marmoratus
ENSLACG00000018221	CHERP	79	65.354	ENSLBEG00000007586	cherp	91	66.317	Labrus_bergylta
ENSLACG00000018221	CHERP	99	72.349	ENSLOCG00000003654	cherp	79	71.742	Lepisosteus_oculatus
ENSLACG00000018221	CHERP	79	76.354	ENSLAFG00000009096	CHERP	100	78.085	Loxodonta_africana
ENSLACG00000018221	CHERP	80	77.734	ENSMFAG00000033267	CHERP	99	79.053	Macaca_fascicularis
ENSLACG00000018221	CHERP	99	76.291	ENSMMUG00000012958	CHERP	82	78.646	Macaca_mulatta
ENSLACG00000018221	CHERP	80	77.734	ENSMNEG00000004125	CHERP	99	79.053	Macaca_nemestrina
ENSLACG00000018221	CHERP	74	94.737	ENSMLEG00000044337	CHERP	99	87.126	Mandrillus_leucophaeus
ENSLACG00000018221	CHERP	80	64.714	ENSMAMG00000022269	cherp	79	66.281	Mastacembelus_armatus
ENSLACG00000018221	CHERP	80	86.111	ENSMZEG00005018014	cherp	79	66.710	Maylandia_zebra
ENSLACG00000018221	CHERP	75	77.971	ENSMGAG00000005571	CHERP	76	77.168	Meleagris_gallopavo
ENSLACG00000018221	CHERP	80	79.183	ENSMAUG00000015856	Cherp	100	79.275	Mesocricetus_auratus
ENSLACG00000018221	CHERP	99	79.638	ENSMICG00000004577	CHERP	99	80.937	Microcebus_murinus
ENSLACG00000018221	CHERP	80	77.470	ENSMOCG00000014697	Cherp	100	80.503	Microtus_ochrogaster
ENSLACG00000018221	CHERP	87	83.333	ENSMMOG00000008525	cherp	77	65.450	Mola_mola
ENSLACG00000018221	CHERP	98	65.083	ENSMALG00000020688	cherp	79	66.924	Monopterus_albus
ENSLACG00000018221	CHERP	80	74.413	MGP_CAROLIEiJ_G0031220	Cherp	100	80.208	Mus_caroli
ENSLACG00000018221	CHERP	80	77.075	ENSMUSG00000052488	Cherp	79	79.504	Mus_musculus
ENSLACG00000018221	CHERP	80	77.866	MGP_PahariEiJ_G0021685	Cherp	100	79.792	Mus_pahari
ENSLACG00000018221	CHERP	80	79.183	MGP_SPRETEiJ_G0032341	Cherp	100	80.000	Mus_spretus
ENSLACG00000018221	CHERP	79	78.808	ENSMPUG00000016023	CHERP	77	79.396	Mustela_putorius_furo
ENSLACG00000018221	CHERP	80	71.879	ENSMLUG00000013881	CHERP	80	74.543	Myotis_lucifugus
ENSLACG00000018221	CHERP	80	79.974	ENSNGAG00000023323	Cherp	81	80.341	Nannospalax_galili
ENSLACG00000018221	CHERP	100	63.392	ENSNBRG00000001914	cherp	81	65.806	Neolamprologus_brichardi
ENSLACG00000018221	CHERP	99	71.053	ENSNLEG00000005536	CHERP	99	80.085	Nomascus_leucogenys
ENSLACG00000018221	CHERP	62	93.064	ENSMEUG00000010840	CHERP	91	85.324	Notamacropus_eugenii
ENSLACG00000018221	CHERP	98	75.647	ENSODEG00000001528	CHERP	81	78.983	Octodon_degus
ENSLACG00000018221	CHERP	100	62.860	ENSONIG00000007686	cherp	79	65.979	Oreochromis_niloticus
ENSLACG00000018221	CHERP	80	63.860	ENSORLG00000000138	cherp	79	65.930	Oryzias_latipes
ENSLACG00000018221	CHERP	80	63.731	ENSORLG00020013142	cherp	86	75.444	Oryzias_latipes_hni
ENSLACG00000018221	CHERP	80	63.731	ENSORLG00015008911	cherp	79	65.455	Oryzias_latipes_hsok
ENSLACG00000018221	CHERP	80	64.249	ENSOMEG00000016947	cherp	99	64.391	Oryzias_melastigma
ENSLACG00000018221	CHERP	80	77.339	ENSOGAG00000005834	CHERP	79	78.393	Otolemur_garnettii
ENSLACG00000018221	CHERP	79	70.317	ENSOARG00000018876	CHERP	78	71.316	Ovis_aries
ENSLACG00000018221	CHERP	80	77.734	ENSPPAG00000029195	CHERP	99	79.158	Pan_paniscus
ENSLACG00000018221	CHERP	79	75.196	ENSPPRG00000003275	CHERP	99	78.743	Panthera_pardus
ENSLACG00000018221	CHERP	63	63.277	ENSPTIG00000019778	CHERP	84	64.257	Panthera_tigris_altaica
ENSLACG00000018221	CHERP	80	78.996	ENSPTRG00000010647	CHERP	99	80.192	Pan_troglodytes
ENSLACG00000018221	CHERP	80	77.734	ENSPANG00000011698	CHERP	99	79.053	Papio_anubis
ENSLACG00000018221	CHERP	77	63.503	ENSPKIG00000000423	cherp	79	65.495	Paramormyrops_kingsleyae
ENSLACG00000018221	CHERP	99	77.128	ENSPSIG00000011974	CHERP	80	78.968	Pelodiscus_sinensis
ENSLACG00000018221	CHERP	98	61.692	ENSPMGG00000023606	cherp	89	80.899	Periophthalmus_magnuspinnatus
ENSLACG00000018221	CHERP	80	71.429	ENSPEMG00000011238	Cherp	100	79.300	Peromyscus_maniculatus_bairdii
ENSLACG00000018221	CHERP	75	80.945	ENSPCIG00000019615	CHERP	95	80.361	Phascolarctos_cinereus
ENSLACG00000018221	CHERP	100	63.110	ENSPFOG00000016899	cherp	79	66.279	Poecilia_formosa
ENSLACG00000018221	CHERP	98	61.356	ENSPMEG00000002214	cherp	76	66.254	Poecilia_mexicana
ENSLACG00000018221	CHERP	99	63.770	ENSPREG00000020774	cherp	79	66.537	Poecilia_reticulata
ENSLACG00000018221	CHERP	80	75.733	ENSPPYG00000009691	CHERP	99	76.717	Pongo_abelii
ENSLACG00000018221	CHERP	92	83.871	ENSPCAG00000001337	CHERP	90	83.871	Procavia_capensis
ENSLACG00000018221	CHERP	63	89.394	ENSPCOG00000022788	CHERP	99	89.394	Propithecus_coquereli
ENSLACG00000018221	CHERP	89	83.871	ENSPVAG00000004320	CHERP	90	83.871	Pteropus_vampyrus
ENSLACG00000018221	CHERP	80	85.780	ENSPNYG00000003942	cherp	79	66.710	Pundamilia_nyererei
ENSLACG00000018221	CHERP	80	65.195	ENSPNAG00000017179	cherp	79	66.286	Pygocentrus_nattereri
ENSLACG00000018221	CHERP	80	74.804	ENSRNOG00000012323	Cherp	100	80.312	Rattus_norvegicus
ENSLACG00000018221	CHERP	99	73.762	ENSRBIG00000038621	CHERP	99	79.894	Rhinopithecus_bieti
ENSLACG00000018221	CHERP	99	73.867	ENSRROG00000040770	CHERP	99	79.053	Rhinopithecus_roxellana
ENSLACG00000018221	CHERP	80	77.734	ENSSBOG00000014492	CHERP	99	79.158	Saimiri_boliviensis_boliviensis
ENSLACG00000018221	CHERP	78	79.467	ENSSHAG00000010752	CHERP	99	79.869	Sarcophilus_harrisii
ENSLACG00000018221	CHERP	98	56.961	ENSSFOG00015008022	cherp	84	80.675	Scleropages_formosus
ENSLACG00000018221	CHERP	100	61.609	ENSSMAG00000005362	cherp	79	64.430	Scophthalmus_maximus
ENSLACG00000018221	CHERP	100	65.947	ENSSDUG00000019712	cherp	79	69.961	Seriola_dumerili
ENSLACG00000018221	CHERP	100	66.183	ENSSLDG00000012659	cherp	79	69.401	Seriola_lalandi_dorsalis
ENSLACG00000018221	CHERP	79	78.249	ENSSPUG00000008901	CHERP	79	73.705	Sphenodon_punctatus
ENSLACG00000018221	CHERP	100	66.114	ENSSPAG00000010681	cherp	79	67.490	Stegastes_partitus
ENSLACG00000018221	CHERP	79	79.470	ENSSSCG00000013860	CHERP	99	80.618	Sus_scrofa
ENSLACG00000018221	CHERP	80	78.571	ENSTGUG00000000680	CHERP	99	78.953	Taeniopygia_guttata
ENSLACG00000018221	CHERP	100	59.045	ENSTRUG00000007429	cherp	100	60.163	Takifugu_rubripes
ENSLACG00000018221	CHERP	99	63.053	ENSTNIG00000003363	cherp	80	65.155	Tetraodon_nigroviridis
ENSLACG00000018221	CHERP	69	76.692	ENSTTRG00000015006	CHERP	89	78.164	Tursiops_truncatus
ENSLACG00000018221	CHERP	77	77.612	ENSUAMG00000017295	CHERP	80	78.437	Ursus_americanus
ENSLACG00000018221	CHERP	65	77.888	ENSUMAG00000000965	CHERP	68	77.888	Ursus_maritimus
ENSLACG00000018221	CHERP	79	75.457	ENSVVUG00000016546	CHERP	99	79.014	Vulpes_vulpes
ENSLACG00000018221	CHERP	62	77.095	ENSXETG00000002072	cherp	78	75.429	Xenopus_tropicalis