EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLACG00000018287 (Gene tree)
Gene ID
102359180
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
75748 bases
Position
chrJH126570.1:2991002-3066749
Accession
102359180
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000020817RRM_1PF00076.225.9e-3412
ENSLACP00000020817RRM_1PF00076.225.9e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000020957MSI1-2011499XM_005987160ENSLACP00000020817340 (aa)XP_005987222H3BFZ6
Gene Model
Click here to download ENSLACG00000018287's gene model file
Pathways
Pathway IDPathway NameSource
lcm03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018287's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLACG00000018287MSI15231.461ENSLACG00000017101TARDBP5631.461
ENSLACG00000018287MSI15140.116ENSLACG00000011242-9035.036
ENSLACG00000018287MSI15040.000ENSLACG00000003613HNRNPDL9437.059
ENSLACG00000018287MSI15047.929ENSLACG00000015227HNRNPAB7540.000
ENSLACG00000018287MSI15342.784ENSLACG00000009693DAZAP15442.500
ENSLACG00000018287MSI15239.665ENSLACG00000013754hnrnpa1b5439.683
ENSLACG00000018287MSI15344.737ENSLACG00000005306HNRNPD7240.870
ENSLACG00000018287MSI15143.750ENSLACG00000008189hnrnpa35143.407
ENSLACG00000018287MSI15646.250ENSLACG00000013590HNRNPA2B16746.250
ENSLACG00000018287MSI15042.442ENSLACG00000014480HNRNPA09432.792
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000018287MSI110087.427ENSG00000135097MSI19887.427Homo_sapiens
ENSLACG00000018287MSI110083.430ENSAPOG00000003191MSI19483.430Acanthochromis_polyacanthus
ENSLACG00000018287MSI110084.503ENSAPOG00000023458-9484.503Acanthochromis_polyacanthus
ENSLACG00000018287MSI110074.142ENSAMEG00000013302MSI110074.142Ailuropoda_melanoleuca
ENSLACG00000018287MSI19683.792ENSACIG00000017754-7883.792Amphilophus_citrinellus
ENSLACG00000018287MSI110083.430ENSAOCG00000003804MSI19483.430Amphiprion_ocellaris
ENSLACG00000018287MSI110077.941ENSAOCG00000009031-9578.235Amphiprion_ocellaris
ENSLACG00000018287MSI110084.840ENSAPEG00000006857-7984.503Amphiprion_percula
ENSLACG00000018287MSI110083.430ENSAPEG00000003245MSI19483.430Amphiprion_percula
ENSLACG00000018287MSI110080.117ENSATEG00000023779-9380.117Anabas_testudineus
ENSLACG00000018287MSI110084.195ENSATEG00000017059MSI19583.939Anabas_testudineus
ENSLACG00000018287MSI110088.012ENSACAG00000002762MSI19488.012Anolis_carolinensis
ENSLACG00000018287MSI18183.929ENSANAG00000027901-9283.929Aotus_nancymaae
ENSLACG00000018287MSI110087.427ENSANAG00000027151MSI19887.427Aotus_nancymaae
ENSLACG00000018287MSI110084.302ENSACLG00000011230MSI19484.302Astatotilapia_calliptera
ENSLACG00000018287MSI110083.965ENSACLG00000000117-10083.871Astatotilapia_calliptera
ENSLACG00000018287MSI110081.928ENSAMXG00000038960msi17682.282Astyanax_mexicanus
ENSLACG00000018287MSI110087.427ENSBTAG00000009800MSI110087.464Bos_taurus
ENSLACG00000018287MSI110087.427ENSCJAG00000008578MSI19887.427Callithrix_jacchus
ENSLACG00000018287MSI110087.135ENSCAFG00000010283MSI19887.135Canis_familiaris
ENSLACG00000018287MSI110087.781ENSCAFG00020020585MSI110087.781Canis_lupus_dingo
ENSLACG00000018287MSI110086.127ENSCHIG00000024304MSI19886.127Capra_hircus
ENSLACG00000018287MSI110086.850ENSTSYG00000033949MSI19586.850Carlito_syrichta
ENSLACG00000018287MSI110087.636ENSCAPG00000003919MSI17887.636Cavia_aperea
ENSLACG00000018287MSI110087.500ENSCPOG00000012361MSI110087.500Cavia_porcellus
ENSLACG00000018287MSI110087.427ENSCCAG00000035567MSI19887.427Cebus_capucinus
ENSLACG00000018287MSI110087.427ENSCATG00000030019MSI19887.427Cercocebus_atys
ENSLACG00000018287MSI110087.427ENSCLAG00000011329MSI110087.500Chinchilla_lanigera
ENSLACG00000018287MSI16991.026ENSCSAG00000002265MSI18191.026Chlorocebus_sabaeus
ENSLACG00000018287MSI110087.135ENSCPBG00000011349MSI110087.135Chrysemys_picta_bellii
ENSLACG00000018287MSI110086.890ENSCANG00000040651MSI110086.890Colobus_angolensis_palliatus
ENSLACG00000018287MSI110087.427ENSCGRG00001018883Msi19887.427Cricetulus_griseus_chok1gshd
ENSLACG00000018287MSI110086.930ENSCGRG00000002191Msi17286.930Cricetulus_griseus_crigri
ENSLACG00000018287MSI110079.351ENSCSEG00000011032MSI110079.351Cynoglossus_semilaevis
ENSLACG00000018287MSI110083.041ENSCSEG00000008352-9483.041Cynoglossus_semilaevis
ENSLACG00000018287MSI110082.267ENSCSEG00000005834-9482.267Cynoglossus_semilaevis
ENSLACG00000018287MSI110084.211ENSCVAG00000009100MSI19484.211Cyprinodon_variegatus
ENSLACG00000018287MSI16763.090ENSCVAG00000017463-8963.090Cyprinodon_variegatus
ENSLACG00000018287MSI110082.515ENSDARG00000010710msi19982.515Danio_rerio
ENSLACG00000018287MSI18579.221ENSDARG00000102015CABZ01037298.19879.221Danio_rerio
ENSLACG00000018287MSI110080.547ENSDNOG00000005713MSI19180.547Dasypus_novemcinctus
ENSLACG00000018287MSI110087.009ENSDORG00000005610Msi19386.930Dipodomys_ordii
ENSLACG00000018287MSI110082.927ENSETEG00000004756MSI110082.927Echinops_telfairi
ENSLACG00000018287MSI110087.427ENSEASG00005004736MSI19887.427Equus_asinus_asinus
ENSLACG00000018287MSI110087.427ENSECAG00000017526MSI19887.427Equus_caballus
ENSLACG00000018287MSI110082.006ENSELUG00000023280-10080.826Esox_lucius
ENSLACG00000018287MSI110080.495ENSELUG00000023219MSI19280.495Esox_lucius
ENSLACG00000018287MSI110087.427ENSFCAG00000011007MSI19887.427Felis_catus
ENSLACG00000018287MSI110087.781ENSFALG00000007574MSI110087.781Ficedula_albicollis
ENSLACG00000018287MSI110086.585ENSFDAG00000019586MSI110086.585Fukomys_damarensis
ENSLACG00000018287MSI110082.849ENSFHEG00000003560-9482.849Fundulus_heteroclitus
ENSLACG00000018287MSI110085.088ENSFHEG00000022446MSI19485.088Fundulus_heteroclitus
ENSLACG00000018287MSI110082.164ENSGMOG00000001006MSI19480.702Gadus_morhua
ENSLACG00000018287MSI110075.581ENSGMOG00000017838-9475.581Gadus_morhua
ENSLACG00000018287MSI110087.546ENSGALG00000007227MSI19678.552Gallus_gallus
ENSLACG00000018287MSI110082.558ENSGAFG00000021522MSI19482.558Gambusia_affinis
ENSLACG00000018287MSI19768.580ENSGAFG00000005860-9068.580Gambusia_affinis
ENSLACG00000018287MSI110079.532ENSGACG00000008674-9479.532Gasterosteus_aculeatus
ENSLACG00000018287MSI110084.012ENSGACG00000012679MSI19483.918Gasterosteus_aculeatus
ENSLACG00000018287MSI110087.135ENSGAGG00000016037MSI19487.135Gopherus_agassizii
ENSLACG00000018287MSI110087.580ENSGGOG00000010328MSI110087.580Gorilla_gorilla
ENSLACG00000018287MSI110084.302ENSHBUG00000021921MSI19484.302Haplochromis_burtoni
ENSLACG00000018287MSI110083.918ENSHBUG00000011841-9483.918Haplochromis_burtoni
ENSLACG00000018287MSI110087.135ENSHGLG00000012782MSI19887.135Heterocephalus_glaber_female
ENSLACG00000018287MSI110086.585ENSHGLG00100016848MSI110086.585Heterocephalus_glaber_male
ENSLACG00000018287MSI110080.826ENSHCOG00000012019MSI110080.826Hippocampus_comes
ENSLACG00000018287MSI110082.371ENSHCOG00000012067-8982.371Hippocampus_comes
ENSLACG00000018287MSI110082.849ENSIPUG00000001976msi19980.606Ictalurus_punctatus
ENSLACG00000018287MSI110087.781ENSSTOG00000009799MSI110087.781Ictidomys_tridecemlineatus
ENSLACG00000018287MSI110087.427ENSJJAG00000010463Msi19887.427Jaculus_jaculus
ENSLACG00000018287MSI110074.706ENSJJAG00000010643-9475.000Jaculus_jaculus
ENSLACG00000018287MSI110081.416ENSKMAG00000019877-10081.416Kryptolebias_marmoratus
ENSLACG00000018287MSI110084.211ENSKMAG00000011251MSI19484.211Kryptolebias_marmoratus
ENSLACG00000018287MSI110083.140ENSLBEG00000001375-9483.140Labrus_bergylta
ENSLACG00000018287MSI110084.503ENSLBEG00000008789MSI19484.503Labrus_bergylta
ENSLACG00000018287MSI19676.435ENSLAFG00000009412MSI110076.577Loxodonta_africana
ENSLACG00000018287MSI110087.427ENSMFAG00000001798MSI110087.500Macaca_fascicularis
ENSLACG00000018287MSI110087.427ENSMMUG00000031527MSI19687.500Macaca_mulatta
ENSLACG00000018287MSI110087.427ENSMNEG00000040034MSI19887.427Macaca_nemestrina
ENSLACG00000018287MSI110086.890ENSMLEG00000003921MSI110086.890Mandrillus_leucophaeus
ENSLACG00000018287MSI110083.721ENSMAMG00000002279MSI19483.626Mastacembelus_armatus
ENSLACG00000018287MSI110082.849ENSMAMG00000018426-9482.849Mastacembelus_armatus
ENSLACG00000018287MSI110084.302ENSMZEG00005026892MSI19484.302Maylandia_zebra
ENSLACG00000018287MSI110083.918ENSMZEG00005000340-9483.918Maylandia_zebra
ENSLACG00000018287MSI16497.605ENSMGAG00000016518-9997.605Meleagris_gallopavo
ENSLACG00000018287MSI16991.026ENSMAUG00000016820Msi19691.026Mesocricetus_auratus
ENSLACG00000018287MSI110087.427ENSMICG00000033181MSI19887.427Microcebus_murinus
ENSLACG00000018287MSI110087.135ENSMOCG00000002286Msi19887.135Microtus_ochrogaster
ENSLACG00000018287MSI110077.941ENSMMOG00000010492MSI19477.941Mola_mola
ENSLACG00000018287MSI110080.000ENSMMOG00000012265-9980.000Mola_mola
ENSLACG00000018287MSI19660.060ENSMODG00000003189-10060.060Monodelphis_domestica
ENSLACG00000018287MSI110082.507ENSMALG00000001426-10082.507Monopterus_albus
ENSLACG00000018287MSI110083.918ENSMALG00000017889MSI19583.529Monopterus_albus
ENSLACG00000018287MSI110087.135MGP_CAROLIEiJ_G0027626Msi19887.135Mus_caroli
ENSLACG00000018287MSI110087.135ENSMUSG00000054256Msi19986.269Mus_musculus
ENSLACG00000018287MSI110086.842MGP_PahariEiJ_G0024206Msi19886.842Mus_pahari
ENSLACG00000018287MSI110087.135MGP_SPRETEiJ_G0028624Msi19887.135Mus_spretus
ENSLACG00000018287MSI110087.781ENSMPUG00000003168MSI110087.781Mustela_putorius_furo
ENSLACG00000018287MSI110078.869ENSMLUG00000010313MSI110078.869Myotis_lucifugus
ENSLACG00000018287MSI110087.009ENSNGAG00000014508Msi19187.009Nannospalax_galili
ENSLACG00000018287MSI110083.918ENSNBRG00000000841-9483.918Neolamprologus_brichardi
ENSLACG00000018287MSI19474.903ENSNBRG00000018012MSI19974.903Neolamprologus_brichardi
ENSLACG00000018287MSI19676.829ENSNLEG00000015636MSI110076.829Nomascus_leucogenys
ENSLACG00000018287MSI110067.378ENSMEUG00000015759MSI110067.378Notamacropus_eugenii
ENSLACG00000018287MSI19679.365ENSOPRG00000016879MSI110079.365Ochotona_princeps
ENSLACG00000018287MSI110086.890ENSODEG00000006328MSI110086.890Octodon_degus
ENSLACG00000018287MSI110083.918ENSONIG00000011182MSI19483.918Oreochromis_niloticus
ENSLACG00000018287MSI110084.884ENSONIG00000019452-9484.884Oreochromis_niloticus
ENSLACG00000018287MSI110087.781ENSOCUG00000027716MSI110087.781Oryctolagus_cuniculus
ENSLACG00000018287MSI110082.749ENSORLG00000029593MSI19482.749Oryzias_latipes
ENSLACG00000018287MSI110084.795ENSORLG00000019978-9484.795Oryzias_latipes
ENSLACG00000018287MSI110082.749ENSORLG00020008266MSI19981.471Oryzias_latipes_hni
ENSLACG00000018287MSI110084.884ENSORLG00020001208-6784.884Oryzias_latipes_hni
ENSLACG00000018287MSI110082.749ENSORLG00015003916MSI19981.471Oryzias_latipes_hsok
ENSLACG00000018287MSI110084.884ENSORLG00015013672-7183.824Oryzias_latipes_hsok
ENSLACG00000018287MSI110083.626ENSOMEG00000002272-9783.626Oryzias_melastigma
ENSLACG00000018287MSI110084.795ENSOMEG00000017536MSI110084.412Oryzias_melastigma
ENSLACG00000018287MSI110086.957ENSOGAG00000003847MSI19886.957Otolemur_garnettii
ENSLACG00000018287MSI110083.939ENSOARG00000012097MSI110083.939Ovis_aries
ENSLACG00000018287MSI110086.890ENSPPAG00000043073MSI110086.890Pan_paniscus
ENSLACG00000018287MSI110087.427ENSPPRG00000000370MSI19887.427Panthera_pardus
ENSLACG00000018287MSI110087.781ENSPTIG00000008913MSI110087.781Panthera_tigris_altaica
ENSLACG00000018287MSI110087.427ENSPTRG00000005531MSI19887.427Pan_troglodytes
ENSLACG00000018287MSI110087.135ENSPANG00000006335MSI19887.135Papio_anubis
ENSLACG00000018287MSI110085.756ENSPKIG00000016497MSI19485.756Paramormyrops_kingsleyae
ENSLACG00000018287MSI110084.795ENSPKIG00000023575-9484.795Paramormyrops_kingsleyae
ENSLACG00000018287MSI18581.659ENSPSIG00000009621-10081.659Pelodiscus_sinensis
ENSLACG00000018287MSI110083.041ENSPSIG00000011608-9383.721Pelodiscus_sinensis
ENSLACG00000018287MSI19681.957ENSPMGG00000000514MSI19781.957Periophthalmus_magnuspinnatus
ENSLACG00000018287MSI110069.591ENSPMGG00000007743-8969.855Periophthalmus_magnuspinnatus
ENSLACG00000018287MSI110085.460ENSPEMG00000010491Msi19585.460Peromyscus_maniculatus_bairdii
ENSLACG00000018287MSI110082.558ENSPFOG00000008319-8182.558Poecilia_formosa
ENSLACG00000018287MSI110092.070ENSPFOG00000013113MSI19484.795Poecilia_formosa
ENSLACG00000018287MSI110082.558ENSPLAG00000012431-9182.558Poecilia_latipinna
ENSLACG00000018287MSI110084.795ENSPLAG00000014025-9484.795Poecilia_latipinna
ENSLACG00000018287MSI110082.558ENSPMEG00000007025-9377.778Poecilia_mexicana
ENSLACG00000018287MSI110084.795ENSPMEG00000012796MSI19484.795Poecilia_mexicana
ENSLACG00000018287MSI18279.279ENSPREG00000014574-10079.279Poecilia_reticulata
ENSLACG00000018287MSI110081.346ENSPREG00000021416-9479.351Poecilia_reticulata
ENSLACG00000018287MSI110086.550ENSPPYG00000005027MSI19886.550Pongo_abelii
ENSLACG00000018287MSI110069.597ENSPCAG00000002300MSI110069.597Procavia_capensis
ENSLACG00000018287MSI110087.427ENSPCOG00000017341MSI19887.427Propithecus_coquereli
ENSLACG00000018287MSI110071.646ENSPVAG00000002225MSI110071.646Pteropus_vampyrus
ENSLACG00000018287MSI110084.302ENSPNYG00000004379MSI19484.302Pundamilia_nyererei
ENSLACG00000018287MSI110083.918ENSPNYG00000002529-9483.918Pundamilia_nyererei
ENSLACG00000018287MSI110083.041ENSPNAG00000019337msi19483.041Pygocentrus_nattereri
ENSLACG00000018287MSI110087.460ENSRNOG00000001156Msi110087.460Rattus_norvegicus
ENSLACG00000018287MSI110087.781ENSRBIG00000036889MSI110087.781Rhinopithecus_bieti
ENSLACG00000018287MSI110086.667ENSRROG00000041076MSI19386.747Rhinopithecus_roxellana
ENSLACG00000018287MSI110087.427ENSSBOG00000030259MSI19887.500Saimiri_boliviensis_boliviensis
ENSLACG00000018287MSI110078.247ENSSHAG00000006834MSI110078.247Sarcophilus_harrisii
ENSLACG00000018287MSI110086.842ENSSFOG00015005350MSI110085.251Scleropages_formosus
ENSLACG00000018287MSI110086.047ENSSFOG00015014964-9586.047Scleropages_formosus
ENSLACG00000018287MSI110080.866ENSSMAG00000009156-7180.866Scophthalmus_maximus
ENSLACG00000018287MSI110082.875ENSSMAG00000018824MSI19882.121Scophthalmus_maximus
ENSLACG00000018287MSI110084.795ENSSDUG00000001027MSI19484.795Seriola_dumerili
ENSLACG00000018287MSI110083.430ENSSDUG00000022697-9980.952Seriola_dumerili
ENSLACG00000018287MSI110080.000ENSSLDG00000018706-9980.952Seriola_lalandi_dorsalis
ENSLACG00000018287MSI110084.795ENSSLDG00000016832MSI19484.795Seriola_lalandi_dorsalis
ENSLACG00000018287MSI110087.135ENSSPUG00000015741MSI110087.135Sphenodon_punctatus
ENSLACG00000018287MSI110083.965ENSSPAG00000013098-10083.965Stegastes_partitus
ENSLACG00000018287MSI18268.468ENSSPAG00000014085-10068.468Stegastes_partitus
ENSLACG00000018287MSI110087.460ENSSSCG00000029365MSI110087.460Sus_scrofa
ENSLACG00000018287MSI110088.012ENSTGUG00000009534MSI110088.081Taeniopygia_guttata
ENSLACG00000018287MSI18778.017ENSTRUG00000016249MSI110071.161Takifugu_rubripes
ENSLACG00000018287MSI110075.841ENSTRUG00000015636-7975.841Takifugu_rubripes
ENSLACG00000018287MSI110079.827ENSTNIG00000011469MSI19479.710Tetraodon_nigroviridis
ENSLACG00000018287MSI110061.236ENSTNIG00000019814-9561.236Tetraodon_nigroviridis
ENSLACG00000018287MSI110077.899ENSTBEG00000007182MSI110077.899Tupaia_belangeri
ENSLACG00000018287MSI110072.965ENSTTRG00000005663MSI110072.965Tursiops_truncatus
ENSLACG00000018287MSI16694.301ENSUAMG00000015514MSI18594.301Ursus_americanus
ENSLACG00000018287MSI110086.885ENSUMAG00000006176MSI18886.885Ursus_maritimus
ENSLACG00000018287MSI110086.930ENSVVUG00000020993MSI110086.186Vulpes_vulpes
ENSLACG00000018287MSI110085.465ENSXETG00000012216msi19585.549Xenopus_tropicalis
ENSLACG00000018287MSI110070.882ENSXCOG00000017605MSI18970.882Xiphophorus_couchianus
ENSLACG00000018287MSI110084.548ENSXMAG00000027103MSI19078.852Xiphophorus_maculatus
ENSLACG00000018287MSI110082.849ENSXMAG00000018237-9482.849Xiphophorus_maculatus

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