EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018320 (Gene tree)
Gene ID: 102366378
Gene Symbol: NOP53
Alias: GLTSCR2|PICT-1|PICT1
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 12213 bases
Position: chrJH126578.1:3050231-3062443
Accession: 102366378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020851	Nop53	PF07767.11	9.2e-81	1	1
ENSLACP00000020852	Nop53	PF07767.11	4.4e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000020992	NOP53-202	1185	-	ENSLACP00000020852	395 (aa)	-	H3BG31
ENSLACT00000020991	NOP53-201	1541	XM_005987870	ENSLACP00000020851	399 (aa)	XP_005987932	H3BG30

Gene Model

Click here to download ENSLACG00000018320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018320	NOP53	100	50.868	ENSG00000105373	NOP53	95	75.000	Homo_sapiens
ENSLACG00000018320	NOP53	99	51.597	ENSAPOG00000006446	nop53	85	51.980	Acanthochromis_polyacanthus
ENSLACG00000018320	NOP53	99	47.619	ENSAMEG00000015214	NOP53	85	46.172	Ailuropoda_melanoleuca
ENSLACG00000018320	NOP53	89	48.459	ENSACIG00000002467	nop53	99	49.020	Amphilophus_citrinellus
ENSLACG00000018320	NOP53	99	51.478	ENSAOCG00000007002	nop53	85	51.861	Amphiprion_ocellaris
ENSLACG00000018320	NOP53	99	51.351	ENSAPEG00000024564	nop53	85	51.733	Amphiprion_percula
ENSLACG00000018320	NOP53	95	51.813	ENSATEG00000021860	nop53	84	51.813	Anabas_testudineus
ENSLACG00000018320	NOP53	70	62.898	ENSACAG00000011362	-	96	61.348	Anolis_carolinensis
ENSLACG00000018320	NOP53	99	47.891	ENSANAG00000007933	NOP53	89	48.276	Aotus_nancymaae
ENSLACG00000018320	NOP53	99	50.617	ENSACLG00000011832	nop53	85	51.111	Astatotilapia_calliptera
ENSLACG00000018320	NOP53	99	53.634	ENSAMXG00000014883	nop53	85	53.171	Astyanax_mexicanus
ENSLACG00000018320	NOP53	100	51.699	ENSBTAG00000021192	NOP53	77	49.517	Bos_taurus
ENSLACG00000018320	NOP53	100	51.435	ENSCJAG00000011385	NOP53	85	53.041	Callithrix_jacchus
ENSLACG00000018320	NOP53	99	50.980	ENSCAFG00000004080	NOP53	85	50.611	Canis_familiaris
ENSLACG00000018320	NOP53	99	52.567	ENSCHIG00000009393	NOP53	85	50.732	Capra_hircus
ENSLACG00000018320	NOP53	99	47.901	ENSTSYG00000036631	NOP53	83	45.567	Carlito_syrichta
ENSLACG00000018320	NOP53	98	51.122	ENSCAPG00000013148	NOP53	100	51.122	Cavia_aperea
ENSLACG00000018320	NOP53	99	50.980	ENSCPOG00000015665	NOP53	85	50.856	Cavia_porcellus
ENSLACG00000018320	NOP53	100	51.861	ENSCCAG00000025477	NOP53	85	51.106	Cebus_capucinus
ENSLACG00000018320	NOP53	100	51.232	ENSCATG00000032842	NOP53	85	50.369	Cercocebus_atys
ENSLACG00000018320	NOP53	100	51.351	ENSCLAG00000001860	NOP53	85	52.038	Chinchilla_lanigera
ENSLACG00000018320	NOP53	100	50.620	ENSCSAG00000002928	NOP53	85	50.123	Chlorocebus_sabaeus
ENSLACG00000018320	NOP53	100	60.199	ENSCPBG00000009047	NOP53	95	60.546	Chrysemys_picta_bellii
ENSLACG00000018320	NOP53	100	36.538	ENSCING00000021395	-	92	35.142	Ciona_intestinalis
ENSLACG00000018320	NOP53	100	35.437	ENSCSAVG00000006009	-	91	36.145	Ciona_savignyi
ENSLACG00000018320	NOP53	100	47.891	ENSCANG00000039648	NOP53	83	47.783	Colobus_angolensis_palliatus
ENSLACG00000018320	NOP53	100	51.807	ENSCGRG00001019033	Nop53	85	49.645	Cricetulus_griseus_chok1gshd
ENSLACG00000018320	NOP53	99	48.148	ENSCSEG00000014834	nop53	85	47.901	Cynoglossus_semilaevis
ENSLACG00000018320	NOP53	99	52.826	ENSCVAG00000005940	nop53	85	52.826	Cyprinodon_variegatus
ENSLACG00000018320	NOP53	99	55.802	ENSDARG00000100452	nop53	100	59.893	Danio_rerio
ENSLACG00000018320	NOP53	100	51.605	ENSDNOG00000005165	NOP53	76	52.088	Dasypus_novemcinctus
ENSLACG00000018320	NOP53	52	47.442	ENSDORG00000016339	-	74	47.442	Dipodomys_ordii
ENSLACG00000018320	NOP53	96	31.566	FBgn0030061	CG1785	86	30.000	Drosophila_melanogaster
ENSLACG00000018320	NOP53	55	51.142	ENSETEG00000003679	-	57	50.685	Echinops_telfairi
ENSLACG00000018320	NOP53	100	42.424	ENSEBUG00000012747	nop53	85	41.709	Eptatretus_burgeri
ENSLACG00000018320	NOP53	100	52.593	ENSEASG00005004345	NOP53	81	52.941	Equus_asinus_asinus
ENSLACG00000018320	NOP53	100	51.214	ENSECAG00000026850	NOP53	81	52.683	Equus_caballus
ENSLACG00000018320	NOP53	83	73.846	ENSEEUG00000005287	NOP53	71	73.846	Erinaceus_europaeus
ENSLACG00000018320	NOP53	99	51.852	ENSELUG00000001525	nop53	85	51.852	Esox_lucius
ENSLACG00000018320	NOP53	100	52.184	ENSFCAG00000010861	NOP53	85	51.332	Felis_catus
ENSLACG00000018320	NOP53	99	42.260	ENSFDAG00000010478	NOP53	82	42.260	Fukomys_damarensis
ENSLACG00000018320	NOP53	99	52.580	ENSFHEG00000017763	nop53	83	51.597	Fundulus_heteroclitus
ENSLACG00000018320	NOP53	99	49.123	ENSGMOG00000014299	nop53	85	49.495	Gadus_morhua
ENSLACG00000018320	NOP53	100	58.394	ENSGALG00000039473	NOP53	68	58.151	Gallus_gallus
ENSLACG00000018320	NOP53	99	51.225	ENSGAFG00000013301	nop53	84	51.716	Gambusia_affinis
ENSLACG00000018320	NOP53	99	49.257	ENSGACG00000005766	nop53	84	49.010	Gasterosteus_aculeatus
ENSLACG00000018320	NOP53	99	46.348	ENSGGOG00000024728	-	84	46.617	Gorilla_gorilla
ENSLACG00000018320	NOP53	91	52.632	ENSGGOG00000005462	NOP53	85	49.875	Gorilla_gorilla
ENSLACG00000018320	NOP53	99	50.617	ENSHBUG00000023625	nop53	85	51.429	Haplochromis_burtoni
ENSLACG00000018320	NOP53	99	49.519	ENSHGLG00000018240	NOP53	85	47.596	Heterocephalus_glaber_female
ENSLACG00000018320	NOP53	84	56.604	ENSHGLG00100015613	NOP53	81	56.604	Heterocephalus_glaber_male
ENSLACG00000018320	NOP53	99	51.790	ENSHCOG00000017133	nop53	86	51.905	Hippocampus_comes
ENSLACG00000018320	NOP53	99	55.112	ENSIPUG00000008154	nop53	75	54.500	Ictalurus_punctatus
ENSLACG00000018320	NOP53	100	52.099	ENSSTOG00000022092	NOP53	84	50.370	Ictidomys_tridecemlineatus
ENSLACG00000018320	NOP53	99	50.971	ENSJJAG00000007854	Nop53	85	51.332	Jaculus_jaculus
ENSLACG00000018320	NOP53	95	50.904	ENSKMAG00000020756	nop53	84	50.904	Kryptolebias_marmoratus
ENSLACG00000018320	NOP53	99	48.889	ENSLBEG00000011432	nop53	85	48.635	Labrus_bergylta
ENSLACG00000018320	NOP53	99	53.500	ENSLOCG00000014178	nop53	85	54.707	Lepisosteus_oculatus
ENSLACG00000018320	NOP53	100	50.868	ENSMFAG00000045103	NOP53	85	50.369	Macaca_fascicularis
ENSLACG00000018320	NOP53	100	50.868	ENSMMUG00000013348	NOP53	95	75.000	Macaca_mulatta
ENSLACG00000018320	NOP53	100	50.868	ENSMNEG00000042540	NOP53	81	50.493	Macaca_nemestrina
ENSLACG00000018320	NOP53	99	44.665	ENSMLEG00000032475	NOP53	84	45.455	Mandrillus_leucophaeus
ENSLACG00000018320	NOP53	99	50.735	ENSMAMG00000012652	nop53	85	52.451	Mastacembelus_armatus
ENSLACG00000018320	NOP53	99	51.020	ENSMZEG00005005033	nop53	89	51.020	Maylandia_zebra
ENSLACG00000018320	NOP53	100	52.048	ENSMAUG00000012617	Nop53	85	50.000	Mesocricetus_auratus
ENSLACG00000018320	NOP53	99	51.358	ENSMICG00000005580	NOP53	89	49.879	Microcebus_murinus
ENSLACG00000018320	NOP53	99	52.488	ENSMOCG00000008367	Nop53	84	52.488	Microtus_ochrogaster
ENSLACG00000018320	NOP53	99	52.764	ENSMMOG00000006515	nop53	84	53.015	Mola_mola
ENSLACG00000018320	NOP53	100	51.880	ENSMODG00000008721	NOP53	78	51.880	Monodelphis_domestica
ENSLACG00000018320	NOP53	99	51.471	ENSMALG00000020350	nop53	81	52.605	Monopterus_albus
ENSLACG00000018320	NOP53	100	51.442	MGP_CAROLIEiJ_G0029218	Nop53	100	57.672	Mus_caroli
ENSLACG00000018320	NOP53	100	51.084	ENSMUSG00000041560	Nop53	85	51.084	Mus_musculus
ENSLACG00000018320	NOP53	100	51.707	MGP_PahariEiJ_G0021074	-	100	57.143	Mus_pahari
ENSLACG00000018320	NOP53	100	50.361	MGP_SPRETEiJ_G0030298	Nop53	100	55.851	Mus_spretus
ENSLACG00000018320	NOP53	100	52.555	ENSMPUG00000004456	NOP53	85	52.555	Mustela_putorius_furo
ENSLACG00000018320	NOP53	65	62.500	ENSMLUG00000027066	-	100	54.244	Myotis_lucifugus
ENSLACG00000018320	NOP53	100	49.406	ENSNGAG00000019894	Nop53	85	49.640	Nannospalax_galili
ENSLACG00000018320	NOP53	99	44.757	ENSNBRG00000002057	nop53	81	44.757	Neolamprologus_brichardi
ENSLACG00000018320	NOP53	88	44.729	ENSNLEG00000028326	-	83	43.417	Nomascus_leucogenys
ENSLACG00000018320	NOP53	100	51.117	ENSNLEG00000003143	NOP53	85	50.614	Nomascus_leucogenys
ENSLACG00000018320	NOP53	92	44.231	ENSMEUG00000002525	-	99	44.231	Notamacropus_eugenii
ENSLACG00000018320	NOP53	99	49.637	ENSODEG00000006707	NOP53	85	49.524	Octodon_degus
ENSLACG00000018320	NOP53	99	51.852	ENSONIG00000016624	nop53	85	52.346	Oreochromis_niloticus
ENSLACG00000018320	NOP53	99	49.624	ENSORLG00000008659	nop53	84	49.123	Oryzias_latipes
ENSLACG00000018320	NOP53	99	45.707	ENSORLG00020019916	nop53	81	45.202	Oryzias_latipes_hni
ENSLACG00000018320	NOP53	99	50.739	ENSORLG00015001315	nop53	85	50.246	Oryzias_latipes_hsok
ENSLACG00000018320	NOP53	99	49.510	ENSOMEG00000018244	nop53	85	50.490	Oryzias_melastigma
ENSLACG00000018320	NOP53	99	40.430	ENSOGAG00000024300	NOP53	86	42.489	Otolemur_garnettii
ENSLACG00000018320	NOP53	99	40.802	ENSOARG00000011414	NOP53	85	40.566	Ovis_aries
ENSLACG00000018320	NOP53	99	45.250	ENSPPAG00000029337	-	84	44.140	Pan_paniscus
ENSLACG00000018320	NOP53	100	49.132	ENSPPAG00000002927	-	84	48.768	Pan_paniscus
ENSLACG00000018320	NOP53	91	46.537	ENSPPAG00000032995	-	84	43.735	Pan_paniscus
ENSLACG00000018320	NOP53	100	52.184	ENSPPRG00000008954	NOP53	85	51.220	Panthera_pardus
ENSLACG00000018320	NOP53	100	50.868	ENSPTRG00000011215	NOP53	85	50.369	Pan_troglodytes
ENSLACG00000018320	NOP53	99	44.750	ENSPTRG00000052493	-	84	43.641	Pan_troglodytes
ENSLACG00000018320	NOP53	99	48.507	ENSPTRG00000043520	-	84	48.395	Pan_troglodytes
ENSLACG00000018320	NOP53	100	50.868	ENSPANG00000002964	NOP53	85	50.369	Papio_anubis
ENSLACG00000018320	NOP53	99	51.358	ENSPKIG00000000127	nop53	84	51.613	Paramormyrops_kingsleyae
ENSLACG00000018320	NOP53	99	53.165	ENSPMGG00000021579	nop53	85	53.418	Periophthalmus_magnuspinnatus
ENSLACG00000018320	NOP53	100	52.404	ENSPEMG00000006856	Nop53	85	50.355	Peromyscus_maniculatus_bairdii
ENSLACG00000018320	NOP53	52	43.119	ENSPMAG00000001501	-	81	43.578	Petromyzon_marinus
ENSLACG00000018320	NOP53	99	52.010	ENSPCIG00000016718	NOP53	85	51.870	Phascolarctos_cinereus
ENSLACG00000018320	NOP53	99	53.186	ENSPFOG00000002839	nop53	85	53.186	Poecilia_formosa
ENSLACG00000018320	NOP53	99	53.186	ENSPLAG00000006675	nop53	85	53.186	Poecilia_latipinna
ENSLACG00000018320	NOP53	53	50.673	ENSPLAG00000009285	-	67	50.673	Poecilia_latipinna
ENSLACG00000018320	NOP53	99	52.941	ENSPMEG00000009589	nop53	85	52.941	Poecilia_mexicana
ENSLACG00000018320	NOP53	53	51.121	ENSPMEG00000006978	nop53	67	51.121	Poecilia_mexicana
ENSLACG00000018320	NOP53	99	50.376	ENSPREG00000008711	nop53	84	50.376	Poecilia_reticulata
ENSLACG00000018320	NOP53	100	47.146	ENSPPYG00000010181	NOP53	83	48.276	Pongo_abelii
ENSLACG00000018320	NOP53	92	52.717	ENSPCAG00000007692	NOP53	78	50.815	Procavia_capensis
ENSLACG00000018320	NOP53	94	50.549	ENSPCOG00000016124	NOP53	82	51.124	Propithecus_coquereli
ENSLACG00000018320	NOP53	73	57.576	ENSPVAG00000014671	NOP53	61	57.576	Pteropus_vampyrus
ENSLACG00000018320	NOP53	99	50.617	ENSPNYG00000001341	nop53	85	51.111	Pundamilia_nyererei
ENSLACG00000018320	NOP53	99	54.208	ENSPNAG00000012520	nop53	85	54.455	Pygocentrus_nattereri
ENSLACG00000018320	NOP53	100	51.220	ENSRNOG00000013023	Nop53	85	50.360	Rattus_norvegicus
ENSLACG00000018320	NOP53	100	50.620	ENSRBIG00000036427	NOP53	85	50.123	Rhinopithecus_bieti
ENSLACG00000018320	NOP53	100	50.372	ENSRROG00000042298	NOP53	85	49.877	Rhinopithecus_roxellana
ENSLACG00000018320	NOP53	100	51.589	ENSSBOG00000033115	NOP53	84	50.608	Saimiri_boliviensis_boliviensis
ENSLACG00000018320	NOP53	100	52.736	ENSSHAG00000002239	NOP53	100	50.966	Sarcophilus_harrisii
ENSLACG00000018320	NOP53	99	51.613	ENSSFOG00015007062	gltscr2	85	51.613	Scleropages_formosus
ENSLACG00000018320	NOP53	99	49.505	ENSSMAG00000000212	nop53	86	50.000	Scophthalmus_maximus
ENSLACG00000018320	NOP53	99	50.000	ENSSDUG00000010575	nop53	85	50.000	Seriola_dumerili
ENSLACG00000018320	NOP53	99	50.633	ENSSLDG00000000140	nop53	82	50.633	Seriola_lalandi_dorsalis
ENSLACG00000018320	NOP53	87	50.867	ENSSARG00000014109	NOP53	72	50.289	Sorex_araneus
ENSLACG00000018320	NOP53	93	54.617	ENSSPUG00000004420	NOP53	81	56.032	Sphenodon_punctatus
ENSLACG00000018320	NOP53	99	52.334	ENSSPAG00000000318	nop53	89	50.508	Stegastes_partitus
ENSLACG00000018320	NOP53	99	49.876	ENSSSCG00000022774	NOP53	84	49.380	Sus_scrofa
ENSLACG00000018320	NOP53	99	51.843	ENSTRUG00000004944	nop53	85	51.106	Takifugu_rubripes
ENSLACG00000018320	NOP53	76	62.308	ENSTBEG00000008708	NOP53	65	62.308	Tupaia_belangeri
ENSLACG00000018320	NOP53	100	50.488	ENSTTRG00000011831	NOP53	85	50.488	Tursiops_truncatus
ENSLACG00000018320	NOP53	99	48.175	ENSUAMG00000028254	NOP53	85	47.317	Ursus_americanus
ENSLACG00000018320	NOP53	75	47.452	ENSVVUG00000023365	NOP53	63	45.541	Vulpes_vulpes
ENSLACG00000018320	NOP53	95	63.717	ENSXETG00000002782	nop53	86	57.975	Xenopus_tropicalis
ENSLACG00000018320	NOP53	99	52.357	ENSXCOG00000004436	nop53	85	52.250	Xiphophorus_couchianus
ENSLACG00000018320	NOP53	99	52.683	ENSXMAG00000002589	nop53	85	52.580	Xiphophorus_maculatus