EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018379 (Gene tree)
Gene ID: 102363172
Gene Symbol: SETD1B
Alias: KIAA1076|KMT2G|Set1B
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 51136 bases
Position: chrJH126594.1:3142997-3194132
Accession: 102363172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020918	RRM_1	PF00076.22	2.8e-09	1	1
ENSLACP00000023518	RRM_1	PF00076.22	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000026202	SETD1B-201	10819	XM_005988975	ENSLACP00000023518	1979 (aa)	XP_005989037	M3XLB2
ENSLACT00000021058	SETD1B-202	6064	-	ENSLACP00000020918	1977 (aa)	-	H3BG97

Gene Model

Click here to download ENSLACG00000018379's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018379	SETD1B	54	70.108	ENSG00000139718	SETD1B	92	62.273	Homo_sapiens
ENSLACG00000018379	SETD1B	91	55.285	ENSACIG00000016453	setd1ba	92	54.344	Amphilophus_citrinellus
ENSLACG00000018379	SETD1B	89	56.056	ENSAPEG00000010762	setd1ba	71	55.479	Amphiprion_percula
ENSLACG00000018379	SETD1B	87	55.273	ENSATEG00000021563	setd1ba	70	57.059	Anabas_testudineus
ENSLACG00000018379	SETD1B	97	74.107	ENSAPLG00000005217	SETD1B	76	75.794	Anas_platyrhynchos
ENSLACG00000018379	SETD1B	63	57.143	ENSANAG00000027480	SETD1B	77	56.052	Aotus_nancymaae
ENSLACG00000018379	SETD1B	56	71.141	ENSCJAG00000003000	SETD1A	62	67.372	Callithrix_jacchus
ENSLACG00000018379	SETD1B	53	77.850	ENSTSYG00000033777	SETD1B	82	75.646	Carlito_syrichta
ENSLACG00000018379	SETD1B	61	71.192	ENSCPOG00000025456	SETD1A	63	68.098	Cavia_porcellus
ENSLACG00000018379	SETD1B	63	56.748	ENSCCAG00000031928	SETD1B	87	62.309	Cebus_capucinus
ENSLACG00000018379	SETD1B	56	71.141	ENSCCAG00000025600	SETD1A	63	67.372	Cebus_capucinus
ENSLACG00000018379	SETD1B	70	69.677	ENSCATG00000035803	SETD1B	86	72.598	Cercocebus_atys
ENSLACG00000018379	SETD1B	65	76.316	ENSCLAG00000013200	SETD1B	92	75.862	Chinchilla_lanigera
ENSLACG00000018379	SETD1B	52	79.417	ENSCPBG00000026067	SETD1B	52	79.510	Chrysemys_picta_bellii
ENSLACG00000018379	SETD1B	56	71.192	ENSCGRG00001022425	-	63	66.667	Cricetulus_griseus_chok1gshd
ENSLACG00000018379	SETD1B	56	71.192	ENSCGRG00000016965	-	64	66.667	Cricetulus_griseus_crigri
ENSLACG00000018379	SETD1B	90	53.565	ENSCVAG00000022068	setd1ba	74	55.912	Cyprinodon_variegatus
ENSLACG00000018379	SETD1B	72	70.130	ENSEASG00005012369	SETD1B	88	59.243	Equus_asinus_asinus
ENSLACG00000018379	SETD1B	54	70.346	ENSECAG00000006549	SETD1B	84	62.095	Equus_caballus
ENSLACG00000018379	SETD1B	81	72.819	ENSELUG00000022712	-	54	58.824	Esox_lucius
ENSLACG00000018379	SETD1B	56	71.192	ENSFCAG00000002588	SETD1A	63	67.069	Felis_catus
ENSLACG00000018379	SETD1B	57	69.264	ENSFCAG00000013185	SETD1B	75	56.340	Felis_catus
ENSLACG00000018379	SETD1B	54	75.448	ENSFDAG00000015120	SETD1B	83	75.448	Fukomys_damarensis
ENSLACG00000018379	SETD1B	52	65.734	ENSGMOG00000015906	-	63	61.442	Gadus_morhua
ENSLACG00000018379	SETD1B	84	60.577	ENSGAFG00000008712	setd1ba	82	61.210	Gambusia_affinis
ENSLACG00000018379	SETD1B	86	54.201	ENSGACG00000017002	setd1ba	89	65.827	Gasterosteus_aculeatus
ENSLACG00000018379	SETD1B	100	68.200	ENSGAGG00000025013	SETD1B	52	79.216	Gopherus_agassizii
ENSLACG00000018379	SETD1B	53	62.535	ENSIPUG00000024741	setd1b	70	51.397	Ictalurus_punctatus
ENSLACG00000018379	SETD1B	50	71.192	ENSSTOG00000005369	SETD1A	63	68.098	Ictidomys_tridecemlineatus
ENSLACG00000018379	SETD1B	67	69.677	ENSSTOG00000012430	SETD1B	93	62.052	Ictidomys_tridecemlineatus
ENSLACG00000018379	SETD1B	90	55.090	ENSLBEG00000020113	setd1ba	91	54.175	Labrus_bergylta
ENSLACG00000018379	SETD1B	66	85.266	ENSLAFG00000026518	SETD1B	62	84.472	Loxodonta_africana
ENSLACG00000018379	SETD1B	71	71.523	ENSMFAG00000030930	SETD1B	89	57.075	Macaca_fascicularis
ENSLACG00000018379	SETD1B	53	69.677	ENSMMUG00000012842	SETD1B	89	60.467	Macaca_mulatta
ENSLACG00000018379	SETD1B	71	71.523	ENSMNEG00000014228	SETD1B	91	57.224	Macaca_nemestrina
ENSLACG00000018379	SETD1B	69	71.523	ENSMLEG00000039573	SETD1B	70	56.929	Mandrillus_leucophaeus
ENSLACG00000018379	SETD1B	63	58.652	ENSMICG00000001152	SETD1B	93	62.644	Microcebus_murinus
ENSLACG00000018379	SETD1B	90	55.067	ENSMMOG00000008190	setd1ba	72	55.208	Mola_mola
ENSLACG00000018379	SETD1B	90	55.885	ENSNBRG00000002915	setd1ba	92	56.383	Neolamprologus_brichardi
ENSLACG00000018379	SETD1B	59	81.044	ENSNLEG00000001254	SETD1B	75	81.044	Nomascus_leucogenys
ENSLACG00000018379	SETD1B	72	69.697	ENSODEG00000010155	SETD1B	81	61.444	Octodon_degus
ENSLACG00000018379	SETD1B	68	71.523	ENSOCUG00000017708	SETD1B	69	59.064	Oryctolagus_cuniculus
ENSLACG00000018379	SETD1B	90	54.665	ENSORLG00020017079	setd1ba	91	54.188	Oryzias_latipes_hni
ENSLACG00000018379	SETD1B	85	60.064	ENSOMEG00000002270	setd1ba	74	54.987	Oryzias_melastigma
ENSLACG00000018379	SETD1B	54	69.957	ENSOGAG00000034809	SETD1B	92	62.165	Otolemur_garnettii
ENSLACG00000018379	SETD1B	53	69.892	ENSPPAG00000043308	SETD1B	77	56.725	Pan_paniscus
ENSLACG00000018379	SETD1B	70	80.000	ENSPPRG00000021041	SETD1B	81	80.165	Panthera_pardus
ENSLACG00000018379	SETD1B	54	70.323	ENSPTRG00000005567	SETD1B	94	62.214	Pan_troglodytes
ENSLACG00000018379	SETD1B	99	63.798	ENSPSIG00000015966	-	87	70.746	Pelodiscus_sinensis
ENSLACG00000018379	SETD1B	81	58.560	ENSPMGG00000011527	setd1ba	73	54.403	Periophthalmus_magnuspinnatus
ENSLACG00000018379	SETD1B	56	71.192	ENSPEMG00000024243	-	76	54.255	Peromyscus_maniculatus_bairdii
ENSLACG00000018379	SETD1B	63	58.742	ENSPCOG00000003246	SETD1B	94	62.811	Propithecus_coquereli
ENSLACG00000018379	SETD1B	90	55.885	ENSPNYG00000009484	setd1ba	92	56.383	Pundamilia_nyererei
ENSLACG00000018379	SETD1B	56	71.523	ENSRNOG00000055028	Setd1a	63	66.964	Rattus_norvegicus
ENSLACG00000018379	SETD1B	54	70.156	ENSRROG00000011844	SETD1B	88	60.632	Rhinopithecus_roxellana
ENSLACG00000018379	SETD1B	72	72.183	ENSSBOG00000033322	SETD1B	85	73.022	Saimiri_boliviensis_boliviensis
ENSLACG00000018379	SETD1B	55	64.348	ENSSFOG00015015331	setd1ba	72	55.788	Scleropages_formosus
ENSLACG00000018379	SETD1B	81	65.517	ENSSFOG00015004814	SETD1B	88	62.981	Scleropages_formosus
ENSLACG00000018379	SETD1B	72	54.345	ENSSMAG00000001244	setd1ba	72	54.345	Scophthalmus_maximus
ENSLACG00000018379	SETD1B	83	61.613	ENSSDUG00000018313	setd1ba	71	56.955	Seriola_dumerili
ENSLACG00000018379	SETD1B	52	78.703	ENSSPUG00000011847	SETD1B	51	78.788	Sphenodon_punctatus
ENSLACG00000018379	SETD1B	89	57.033	ENSTNIG00000009090	setd1ba	53	66.434	Tetraodon_nigroviridis
ENSLACG00000018379	SETD1B	68	71.528	ENSUAMG00000008729	SETD1B	89	72.857	Ursus_americanus
ENSLACG00000018379	SETD1B	54	70.222	ENSVVUG00000016690	SETD1B	68	59.259	Vulpes_vulpes
ENSLACG00000018379	SETD1B	88	55.749	ENSXCOG00000004451	setd1ba	71	57.879	Xiphophorus_couchianus