EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rbfox3
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 63648 bases
Position: chrJH126596.1:3225241-3288888
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000020952	Fox-1_C	PF12414.8	2.2e-41	1	1
ENSLACP00000020952	RRM_1	PF00076.22	8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021092	-	1179	-	ENSLACP00000020952	392 (aa)	-	H3BGD1

Gene Model

Click here to download ENSLACG00000018409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018409	-	100	54.524	ENSLACG00000003339	RBFOX2	98	53.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018409	-	83	78.287	ENSG00000167281	RBFOX3	95	76.074	Homo_sapiens
ENSLACG00000018409	-	100	68.861	ENSAPOG00000021630	rbfox3b	88	71.549	Acanthochromis_polyacanthus
ENSLACG00000018409	-	98	57.216	ENSAPOG00000015658	-	90	56.701	Acanthochromis_polyacanthus
ENSLACG00000018409	-	100	76.768	ENSAMEG00000014170	RBFOX3	98	75.000	Ailuropoda_melanoleuca
ENSLACG00000018409	-	87	71.304	ENSACIG00000010817	rbfox3b	95	68.182	Amphilophus_citrinellus
ENSLACG00000018409	-	86	69.412	ENSACIG00000003768	-	79	73.220	Amphilophus_citrinellus
ENSLACG00000018409	-	92	70.166	ENSAOCG00000010786	-	88	70.166	Amphiprion_ocellaris
ENSLACG00000018409	-	90	72.958	ENSAOCG00000012358	rbfox3b	88	71.549	Amphiprion_ocellaris
ENSLACG00000018409	-	98	66.838	ENSAPEG00000015891	-	91	67.179	Amphiprion_percula
ENSLACG00000018409	-	90	67.227	ENSAPEG00000019081	rbfox3b	88	66.947	Amphiprion_percula
ENSLACG00000018409	-	84	66.667	ENSATEG00000023101	-	92	67.463	Anabas_testudineus
ENSLACG00000018409	-	87	66.845	ENSATEG00000019945	rbfox3b	95	64.345	Anabas_testudineus
ENSLACG00000018409	-	90	76.836	ENSACAG00000016093	RBFOX3	91	75.989	Anolis_carolinensis
ENSLACG00000018409	-	83	77.607	ENSANAG00000023457	RBFOX3	95	75.460	Aotus_nancymaae
ENSLACG00000018409	-	90	72.113	ENSACLG00000025552	-	89	72.113	Astatotilapia_calliptera
ENSLACG00000018409	-	100	69.036	ENSACLG00000020011	rbfox3b	95	69.512	Astatotilapia_calliptera
ENSLACG00000018409	-	90	69.577	ENSAMXG00000042841	rbfox3b	92	67.324	Astyanax_mexicanus
ENSLACG00000018409	-	91	72.853	ENSAMXG00000037246	rbfox3a	98	73.109	Astyanax_mexicanus
ENSLACG00000018409	-	71	75.000	ENSBTAG00000006280	RBFOX3	95	57.412	Bos_taurus
ENSLACG00000018409	-	83	73.700	ENSCJAG00000009563	RBFOX3	88	73.700	Callithrix_jacchus
ENSLACG00000018409	-	78	74.026	ENSCAFG00000005547	RBFOX3	100	74.026	Canis_familiaris
ENSLACG00000018409	-	93	62.530	ENSCAFG00020008126	RBFOX3	96	62.530	Canis_lupus_dingo
ENSLACG00000018409	-	93	61.800	ENSCHIG00000009124	RBFOX3	96	61.800	Capra_hircus
ENSLACG00000018409	-	83	68.817	ENSTSYG00000029617	RBFOX3	96	68.817	Carlito_syrichta
ENSLACG00000018409	-	93	64.251	ENSCPOG00000021703	RBFOX3	96	70.035	Cavia_porcellus
ENSLACG00000018409	-	83	77.607	ENSCCAG00000028450	RBFOX3	95	75.460	Cebus_capucinus
ENSLACG00000018409	-	83	78.221	ENSCATG00000018349	RBFOX3	95	76.074	Cercocebus_atys
ENSLACG00000018409	-	93	64.563	ENSCLAG00000006449	RBFOX3	96	68.280	Chinchilla_lanigera
ENSLACG00000018409	-	83	78.221	ENSCSAG00000002355	RBFOX3	95	76.074	Chlorocebus_sabaeus
ENSLACG00000018409	-	100	73.980	ENSCPBG00000010904	RBFOX3	98	77.841	Chrysemys_picta_bellii
ENSLACG00000018409	-	83	78.221	ENSCANG00000043120	RBFOX3	95	76.074	Colobus_angolensis_palliatus
ENSLACG00000018409	-	93	61.017	ENSCGRG00001019476	Rbfox3	96	68.641	Cricetulus_griseus_chok1gshd
ENSLACG00000018409	-	93	61.017	ENSCGRG00000003268	Rbfox3	96	68.641	Cricetulus_griseus_crigri
ENSLACG00000018409	-	100	70.380	ENSCSEG00000015567	RBFOX3	96	70.380	Cynoglossus_semilaevis
ENSLACG00000018409	-	90	58.989	ENSCSEG00000020606	RBFOX3	87	57.927	Cynoglossus_semilaevis
ENSLACG00000018409	-	90	72.958	ENSCVAG00000006882	rbfox3b	88	71.549	Cyprinodon_variegatus
ENSLACG00000018409	-	90	72.269	ENSDARG00000010083	rbfox3a	99	72.269	Danio_rerio
ENSLACG00000018409	-	100	56.633	ENSDARG00000074310	rbfox3b	97	69.608	Danio_rerio
ENSLACG00000018409	-	73	60.909	ENSDNOG00000039391	RBFOX3	57	96.552	Dasypus_novemcinctus
ENSLACG00000018409	-	93	55.000	ENSDORG00000005352	Rbfox3	95	55.285	Dipodomys_ordii
ENSLACG00000018409	-	76	52.273	ENSEBUG00000013559	RBFOX3	69	53.430	Eptatretus_burgeri
ENSLACG00000018409	-	100	59.705	ENSEBUG00000002129	RBFOX3	99	59.951	Eptatretus_burgeri
ENSLACG00000018409	-	83	75.767	ENSEASG00005005059	RBFOX3	95	76.453	Equus_asinus_asinus
ENSLACG00000018409	-	83	75.535	ENSECAG00000023811	RBFOX3	95	76.147	Equus_caballus
ENSLACG00000018409	-	93	59.640	ENSEEUG00000013974	RBFOX3	72	82.292	Erinaceus_europaeus
ENSLACG00000018409	-	100	69.620	ENSELUG00000017963	rbfox3b	88	71.268	Esox_lucius
ENSLACG00000018409	-	90	78.754	ENSFCAG00000002555	RBFOX3	95	75.460	Felis_catus
ENSLACG00000018409	-	100	67.322	ENSFALG00000012288	RBFOX3	98	65.848	Ficedula_albicollis
ENSLACG00000018409	-	93	59.662	ENSFDAG00000007489	RBFOX3	96	58.937	Fukomys_damarensis
ENSLACG00000018409	-	87	63.848	ENSFHEG00000008550	rbfox3b	96	61.329	Fundulus_heteroclitus
ENSLACG00000018409	-	97	53.828	ENSGMOG00000019304	-	91	56.704	Gadus_morhua
ENSLACG00000018409	-	91	80.392	ENSGALG00000032889	RBFOX3	90	78.693	Gallus_gallus
ENSLACG00000018409	-	90	70.028	ENSGAFG00000005025	rbfox3b	86	70.732	Gambusia_affinis
ENSLACG00000018409	-	93	58.753	ENSGACG00000002138	-	96	59.233	Gasterosteus_aculeatus
ENSLACG00000018409	-	100	73.214	ENSGAGG00000020025	RBFOX3	97	76.133	Gopherus_agassizii
ENSLACG00000018409	-	83	78.221	ENSGGOG00000012546	RBFOX3	95	76.074	Gorilla_gorilla
ENSLACG00000018409	-	100	67.595	ENSHBUG00000023098	-	97	67.595	Haplochromis_burtoni
ENSLACG00000018409	-	100	69.036	ENSHBUG00000018099	rbfox3b	88	70.986	Haplochromis_burtoni
ENSLACG00000018409	-	93	63.702	ENSHGLG00000008679	RBFOX3	96	66.313	Heterocephalus_glaber_female
ENSLACG00000018409	-	93	60.241	ENSHGLG00100014739	RBFOX3	96	57.108	Heterocephalus_glaber_male
ENSLACG00000018409	-	88	66.762	ENSHCOG00000001863	RBFOX3	88	65.758	Hippocampus_comes
ENSLACG00000018409	-	85	65.766	ENSHCOG00000007444	RBFOX3	77	65.758	Hippocampus_comes
ENSLACG00000018409	-	87	61.905	ENSIPUG00000021966	rbfox3b	98	70.345	Ictalurus_punctatus
ENSLACG00000018409	-	100	68.010	ENSIPUG00000012010	rbfox3a	98	71.989	Ictalurus_punctatus
ENSLACG00000018409	-	93	61.475	ENSSTOG00000026817	RBFOX3	95	63.804	Ictidomys_tridecemlineatus
ENSLACG00000018409	-	93	62.530	ENSJJAG00000014167	Rbfox3	96	66.038	Jaculus_jaculus
ENSLACG00000018409	-	100	67.857	ENSKMAG00000006726	rbfox3b	94	66.076	Kryptolebias_marmoratus
ENSLACG00000018409	-	90	73.803	ENSLBEG00000022508	-	89	73.803	Labrus_bergylta
ENSLACG00000018409	-	100	68.608	ENSLBEG00000004030	rbfox3b	95	67.879	Labrus_bergylta
ENSLACG00000018409	-	100	75.743	ENSLOCG00000012267	rbfox3a	98	80.282	Lepisosteus_oculatus
ENSLACG00000018409	-	100	76.904	ENSLAFG00000016623	RBFOX3	98	76.904	Loxodonta_africana
ENSLACG00000018409	-	93	63.544	ENSMFAG00000002247	RBFOX3	96	66.038	Macaca_fascicularis
ENSLACG00000018409	-	83	78.221	ENSMMUG00000023028	RBFOX3	95	76.074	Macaca_mulatta
ENSLACG00000018409	-	83	77.914	ENSMNEG00000041147	RBFOX3	95	75.767	Macaca_nemestrina
ENSLACG00000018409	-	83	78.221	ENSMLEG00000025686	RBFOX3	95	76.074	Mandrillus_leucophaeus
ENSLACG00000018409	-	100	68.354	ENSMAMG00000020600	-	99	68.354	Mastacembelus_armatus
ENSLACG00000018409	-	87	70.468	ENSMAMG00000019810	rbfox3b	94	66.667	Mastacembelus_armatus
ENSLACG00000018409	-	91	58.197	ENSMZEG00005003055	-	72	67.260	Maylandia_zebra
ENSLACG00000018409	-	100	69.036	ENSMZEG00005000781	rbfox3b	88	70.986	Maylandia_zebra
ENSLACG00000018409	-	56	88.073	ENSMGAG00000005600	RBFOX3	83	88.532	Meleagris_gallopavo
ENSLACG00000018409	-	93	63.680	ENSMAUG00000013543	Rbfox3	96	67.292	Mesocricetus_auratus
ENSLACG00000018409	-	90	77.273	ENSMICG00000014898	RBFOX3	96	75.767	Microcebus_murinus
ENSLACG00000018409	-	93	63.592	ENSMOCG00000015373	Rbfox3	96	67.204	Microtus_ochrogaster
ENSLACG00000018409	-	100	67.677	ENSMMOG00000020193	rbfox3b	98	67.168	Mola_mola
ENSLACG00000018409	-	90	79.830	ENSMODG00000002089	RBFOX3	90	77.841	Monodelphis_domestica
ENSLACG00000018409	-	90	72.394	ENSMALG00000020407	rbfox3b	88	70.986	Monopterus_albus
ENSLACG00000018409	-	100	69.114	ENSMALG00000018270	-	94	69.643	Monopterus_albus
ENSLACG00000018409	-	93	72.131	MGP_CAROLIEiJ_G0017487	Rbfox3	91	83.766	Mus_caroli
ENSLACG00000018409	-	93	72.131	ENSMUSG00000025576	Rbfox3	91	83.766	Mus_musculus
ENSLACG00000018409	-	93	69.672	MGP_PahariEiJ_G0018614	Rbfox3	91	83.766	Mus_pahari
ENSLACG00000018409	-	93	72.404	MGP_SPRETEiJ_G0018331	Rbfox3	91	83.766	Mus_spretus
ENSLACG00000018409	-	100	73.449	ENSMPUG00000012319	RBFOX3	98	72.208	Mustela_putorius_furo
ENSLACG00000018409	-	93	64.806	ENSNGAG00000018006	Rbfox3	96	68.548	Nannospalax_galili
ENSLACG00000018409	-	90	69.296	ENSNBRG00000022885	-	89	67.887	Neolamprologus_brichardi
ENSLACG00000018409	-	90	72.316	ENSNBRG00000010102	rbfox3b	88	71.549	Neolamprologus_brichardi
ENSLACG00000018409	-	56	96.429	ENSNLEG00000000153	-	79	96.429	Nomascus_leucogenys
ENSLACG00000018409	-	83	52.291	ENSMEUG00000004218	-	75	93.103	Notamacropus_eugenii
ENSLACG00000018409	-	74	83.158	ENSOPRG00000016279	-	70	83.158	Ochotona_princeps
ENSLACG00000018409	-	83	78.221	ENSODEG00000009433	RBFOX3	95	78.221	Octodon_degus
ENSLACG00000018409	-	90	72.958	ENSONIG00000009549	rbfox3b	88	71.549	Oreochromis_niloticus
ENSLACG00000018409	-	92	73.204	ENSONIG00000007282	-	98	73.204	Oreochromis_niloticus
ENSLACG00000018409	-	72	62.541	ENSOCUG00000014217	RBFOX3	84	57.643	Oryctolagus_cuniculus
ENSLACG00000018409	-	100	69.367	ENSORLG00000000905	rbfox3b	70	71.067	Oryzias_latipes
ENSLACG00000018409	-	100	69.367	ENSORLG00020018030	rbfox3b	98	62.817	Oryzias_latipes_hni
ENSLACG00000018409	-	100	66.667	ENSORLG00015009200	rbfox3b	98	62.535	Oryzias_latipes_hsok
ENSLACG00000018409	-	71	69.932	ENSOMEG00000014677	rbfox3b	74	70.550	Oryzias_melastigma
ENSLACG00000018409	-	99	74.235	ENSOGAG00000029595	RBFOX3	97	72.449	Otolemur_garnettii
ENSLACG00000018409	-	100	58.519	ENSOARG00000002908	RBFOX3	99	59.950	Ovis_aries
ENSLACG00000018409	-	71	76.071	ENSPPAG00000025383	RBFOX3	88	76.071	Pan_paniscus
ENSLACG00000018409	-	83	66.301	ENSPPRG00000007819	RBFOX3	96	66.301	Panthera_pardus
ENSLACG00000018409	-	83	78.221	ENSPTRG00000009727	RBFOX3	95	76.074	Pan_troglodytes
ENSLACG00000018409	-	83	78.221	ENSPANG00000019837	RBFOX3	95	76.074	Papio_anubis
ENSLACG00000018409	-	100	73.671	ENSPKIG00000010299	rbfox3a	92	73.671	Paramormyrops_kingsleyae
ENSLACG00000018409	-	100	57.935	ENSPKIG00000022633	-	92	55.919	Paramormyrops_kingsleyae
ENSLACG00000018409	-	75	73.244	ENSPMGG00000008000	rbfox3b	83	73.826	Periophthalmus_magnuspinnatus
ENSLACG00000018409	-	93	64.078	ENSPEMG00000010500	Rbfox3	96	67.742	Peromyscus_maniculatus_bairdii
ENSLACG00000018409	-	62	56.809	ENSPMAG00000008689	rbfox3b	99	58.366	Petromyzon_marinus
ENSLACG00000018409	-	90	70.101	ENSPCIG00000005766	RBFOX3	97	68.262	Phascolarctos_cinereus
ENSLACG00000018409	-	100	68.861	ENSPFOG00000018294	rbfox3b	97	62.963	Poecilia_formosa
ENSLACG00000018409	-	79	67.093	ENSPLAG00000000481	rbfox3b	78	64.516	Poecilia_latipinna
ENSLACG00000018409	-	87	63.848	ENSPMEG00000022997	rbfox3b	96	61.329	Poecilia_mexicana
ENSLACG00000018409	-	91	74.022	ENSPREG00000012886	rbfox3b	93	71.831	Poecilia_reticulata
ENSLACG00000018409	-	99	64.541	ENSPPYG00000008704	RBFOX3	99	62.500	Pongo_abelii
ENSLACG00000018409	-	83	67.116	ENSPCAG00000001401	RBFOX3	96	67.116	Procavia_capensis
ENSLACG00000018409	-	88	66.327	ENSPCOG00000012689	RBFOX3	97	66.307	Propithecus_coquereli
ENSLACG00000018409	-	83	59.140	ENSPVAG00000015243	RBFOX3	96	59.140	Pteropus_vampyrus
ENSLACG00000018409	-	90	66.106	ENSPNYG00000010414	rbfox3b	87	65.266	Pundamilia_nyererei
ENSLACG00000018409	-	92	68.232	ENSPNYG00000009079	-	86	66.851	Pundamilia_nyererei
ENSLACG00000018409	-	100	68.766	ENSPNAG00000002889	rbfox3a	88	72.829	Pygocentrus_nattereri
ENSLACG00000018409	-	87	60.933	ENSPNAG00000018173	rbfox3b	95	55.682	Pygocentrus_nattereri
ENSLACG00000018409	-	83	74.540	ENSRNOG00000003386	Rbfox3	95	75.229	Rattus_norvegicus
ENSLACG00000018409	-	90	78.977	ENSRBIG00000040449	RBFOX3	90	76.989	Rhinopithecus_bieti
ENSLACG00000018409	-	83	78.221	ENSRROG00000000766	RBFOX3	95	76.074	Rhinopithecus_roxellana
ENSLACG00000018409	-	83	77.607	ENSSBOG00000031591	RBFOX3	95	75.460	Saimiri_boliviensis_boliviensis
ENSLACG00000018409	-	100	75.810	ENSSHAG00000016076	RBFOX3	99	74.065	Sarcophilus_harrisii
ENSLACG00000018409	-	90	62.429	ENSSFOG00015004716	RBFOX3	92	62.817	Scleropages_formosus
ENSLACG00000018409	-	100	74.684	ENSSFOG00015023260	rbfox3a	98	70.704	Scleropages_formosus
ENSLACG00000018409	-	90	70.704	ENSSMAG00000019052	-	95	69.817	Scophthalmus_maximus
ENSLACG00000018409	-	100	66.667	ENSSMAG00000012618	rbfox3b	77	68.733	Scophthalmus_maximus
ENSLACG00000018409	-	87	63.848	ENSSDUG00000023183	rbfox3b	96	61.329	Seriola_dumerili
ENSLACG00000018409	-	100	65.578	ENSSDUG00000015801	-	96	65.903	Seriola_dumerili
ENSLACG00000018409	-	90	72.958	ENSSLDG00000000149	rbfox3b	88	71.549	Seriola_lalandi_dorsalis
ENSLACG00000018409	-	100	69.873	ENSSLDG00000016098	-	98	69.608	Seriola_lalandi_dorsalis
ENSLACG00000018409	-	83	77.439	ENSSPUG00000011733	RBFOX3	95	76.524	Sphenodon_punctatus
ENSLACG00000018409	-	90	67.507	ENSSPAG00000017571	rbfox3b	87	65.546	Stegastes_partitus
ENSLACG00000018409	-	80	65.190	ENSSPAG00000004898	-	76	63.287	Stegastes_partitus
ENSLACG00000018409	-	76	77.517	ENSSSCG00000039498	RBFOX3	100	62.924	Sus_scrofa
ENSLACG00000018409	-	100	65.174	ENSTRUG00000004894	rbfox3b	97	64.838	Takifugu_rubripes
ENSLACG00000018409	-	100	69.250	ENSTNIG00000011278	rbfox3b	99	68.250	Tetraodon_nigroviridis
ENSLACG00000018409	-	83	60.108	ENSTTRG00000003676	RBFOX3	96	60.108	Tursiops_truncatus
ENSLACG00000018409	-	83	77.607	ENSUAMG00000004668	RBFOX3	95	75.460	Ursus_americanus
ENSLACG00000018409	-	100	74.046	ENSVVUG00000017864	RBFOX3	95	75.767	Vulpes_vulpes
ENSLACG00000018409	-	100	63.104	ENSXETG00000020236	rbfox3	98	62.341	Xenopus_tropicalis
ENSLACG00000018409	-	90	71.910	ENSXCOG00000018262	rbfox3b	95	67.278	Xiphophorus_couchianus
ENSLACG00000018409	-	100	68.861	ENSXMAG00000012939	rbfox3b	88	71.549	Xiphophorus_maculatus