EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLACG00000018452 (Gene tree)
Gene ID
102346425
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Minus strand
Length
34318 bases
Position
chrJH126587.1:3328802-3363119
Accession
102346425
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000021001CSDPF00313.229e-7615
ENSLACP00000021001CSDPF00313.229e-7625
ENSLACP00000021001CSDPF00313.229e-7635
ENSLACP00000021001CSDPF00313.229e-7645
ENSLACP00000021001CSDPF00313.229e-7655
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000021141CSDE1-2012565XM_005988486ENSLACP00000021001854 (aa)-H3BGI0
Gene Model
Click here to download ENSLACG00000018452's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018452's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000018452CSDE19679.294ENSG00000009307CSDE110090.526Homo_sapiens
ENSLACG00000018452CSDE19872.874ENSAPOG00000015538csde110074.700Acanthochromis_polyacanthus
ENSLACG00000018452CSDE19674.909ENSAMEG00000017129CSDE19774.728Ailuropoda_melanoleuca
ENSLACG00000018452CSDE19381.622ENSACIG00000015175csde110081.622Amphilophus_citrinellus
ENSLACG00000018452CSDE110071.572ENSAOCG00000011510csde110074.353Amphiprion_ocellaris
ENSLACG00000018452CSDE110073.121ENSAPEG00000007194csde110075.181Amphiprion_percula
ENSLACG00000018452CSDE19473.613ENSATEG00000003864csde110073.399Anabas_testudineus
ENSLACG00000018452CSDE19476.799ENSAPLG00000008797CSDE110076.799Anas_platyrhynchos
ENSLACG00000018452CSDE19481.017ENSACAG00000003120CSDE110081.017Anolis_carolinensis
ENSLACG00000018452CSDE17466.667ENSANAG00000028396-9166.667Aotus_nancymaae
ENSLACG00000018452CSDE19679.050ENSANAG00000024665CSDE19483.793Aotus_nancymaae
ENSLACG00000018452CSDE19476.173ENSACLG00000013296csde110076.173Astatotilapia_calliptera
ENSLACG00000018452CSDE19473.120ENSAMXG00000007436csde110073.120Astyanax_mexicanus
ENSLACG00000018452CSDE19678.928ENSBTAG00000000678CSDE19778.718Bos_taurus
ENSLACG00000018452CSDE19679.172ENSCJAG00000012565CSDE19778.960Callithrix_jacchus
ENSLACG00000018452CSDE19475.776ENSCAFG00000009618CSDE19775.586Canis_familiaris
ENSLACG00000018452CSDE19476.303ENSCAFG00020000481CSDE110076.303Canis_lupus_dingo
ENSLACG00000018452CSDE19679.050ENSCHIG00000017250CSDE19778.839Capra_hircus
ENSLACG00000018452CSDE19679.294ENSTSYG00000003747CSDE110079.901Carlito_syrichta
ENSLACG00000018452CSDE19485.976ENSCAPG00000015128CSDE110085.976Cavia_aperea
ENSLACG00000018452CSDE19474.938ENSCPOG00000040388CSDE110074.938Cavia_porcellus
ENSLACG00000018452CSDE18854.907ENSCCAG00000033677-9954.907Cebus_capucinus
ENSLACG00000018452CSDE19679.172ENSCCAG00000036794CSDE110079.777Cebus_capucinus
ENSLACG00000018452CSDE19154.825ENSCCAG00000030878-9154.825Cebus_capucinus
ENSLACG00000018452CSDE19679.294ENSCATG00000036962CSDE19779.081Cercocebus_atys
ENSLACG00000018452CSDE19480.149ENSCLAG00000006618CSDE110080.149Chinchilla_lanigera
ENSLACG00000018452CSDE19679.294ENSCSAG00000001658CSDE19779.081Chlorocebus_sabaeus
ENSLACG00000018452CSDE19687.117ENSCHOG00000000918CSDE18787.117Choloepus_hoffmanni
ENSLACG00000018452CSDE19481.390ENSCPBG00000016547CSDE110081.390Chrysemys_picta_bellii
ENSLACG00000018452CSDE19342.637ENSCING00000014465-9642.874Ciona_intestinalis
ENSLACG00000018452CSDE19042.002ENSCSAVG00000008100-9842.034Ciona_savignyi
ENSLACG00000018452CSDE19679.172ENSCANG00000035096CSDE19778.960Colobus_angolensis_palliatus
ENSLACG00000018452CSDE18486.038ENSCANG00000031069-9386.038Colobus_angolensis_palliatus
ENSLACG00000018452CSDE19479.404ENSCGRG00001016833-10079.404Cricetulus_griseus_chok1gshd
ENSLACG00000018452CSDE19462.112ENSCGRG00001014011-10062.112Cricetulus_griseus_chok1gshd
ENSLACG00000018452CSDE19172.149ENSCGRG00000002225-10072.149Cricetulus_griseus_crigri
ENSLACG00000018452CSDE19466.794ENSCGRG00000005831-10066.794Cricetulus_griseus_crigri
ENSLACG00000018452CSDE19671.981ENSCSEG00000002620csde110073.086Cynoglossus_semilaevis
ENSLACG00000018452CSDE19973.949ENSCVAG00000001344csde110075.921Cyprinodon_variegatus
ENSLACG00000018452CSDE19972.050ENSDARG00000074758csde110080.423Danio_rerio
ENSLACG00000018452CSDE19476.208ENSDNOG00000010287-9376.208Dasypus_novemcinctus
ENSLACG00000018452CSDE19479.156ENSDORG00000011609Csde110079.156Dipodomys_ordii
ENSLACG00000018452CSDE19149.187FBgn0263352Unr7748.996Drosophila_melanogaster
ENSLACG00000018452CSDE19459.204ENSETEG00000013678-9959.204Echinops_telfairi
ENSLACG00000018452CSDE19087.603ENSETEG00000002491-7687.603Echinops_telfairi
ENSLACG00000018452CSDE17155.902ENSETEG00000007109-9955.902Echinops_telfairi
ENSLACG00000018452CSDE17769.184ENSETEG00000006280-9969.184Echinops_telfairi
ENSLACG00000018452CSDE19454.390ENSEBUG00000008647csde19952.669Eptatretus_burgeri
ENSLACG00000018452CSDE19480.273ENSEASG00005006284CSDE110080.273Equus_asinus_asinus
ENSLACG00000018452CSDE19480.273ENSECAG00000020885CSDE110080.273Equus_caballus
ENSLACG00000018452CSDE19373.500ENSEEUG00000006286CSDE17077.151Erinaceus_europaeus
ENSLACG00000018452CSDE19870.924ENSELUG00000015507csde110071.130Esox_lucius
ENSLACG00000018452CSDE19679.537ENSFCAG00000029266CSDE19779.323Felis_catus
ENSLACG00000018452CSDE19480.149ENSFALG00000003407CSDE110080.149Ficedula_albicollis
ENSLACG00000018452CSDE19479.529ENSFDAG00000007882CSDE110079.529Fukomys_damarensis
ENSLACG00000018452CSDE19973.550ENSFHEG00000010799csde110076.296Fundulus_heteroclitus
ENSLACG00000018452CSDE19474.907ENSGMOG00000012731csde110074.907Gadus_morhua
ENSLACG00000018452CSDE19379.825ENSGALG00000002139CSDE19979.825Gallus_gallus
ENSLACG00000018452CSDE17775.492ENSGAFG00000005241csde19175.492Gambusia_affinis
ENSLACG00000018452CSDE19476.420ENSGACG00000004544csde110076.420Gasterosteus_aculeatus
ENSLACG00000018452CSDE19680.952ENSGAGG00000017685CSDE110081.390Gopherus_agassizii
ENSLACG00000018452CSDE19679.294ENSGGOG00000002164CSDE19483.448Gorilla_gorilla
ENSLACG00000018452CSDE19973.372ENSHBUG00000020315csde110073.580Haplochromis_burtoni
ENSLACG00000018452CSDE19464.348ENSHGLG00000000650-9964.348Heterocephalus_glaber_female
ENSLACG00000018452CSDE19164.474ENSHGLG00000010039-10064.474Heterocephalus_glaber_female
ENSLACG00000018452CSDE19368.852ENSHGLG00000008555-9968.852Heterocephalus_glaber_female
ENSLACG00000018452CSDE19366.500ENSHGLG00000007471-9866.500Heterocephalus_glaber_female
ENSLACG00000018452CSDE19476.025ENSHGLG00000009620-10075.776Heterocephalus_glaber_female
ENSLACG00000018452CSDE19468.983ENSHGLG00000003829-10068.983Heterocephalus_glaber_female
ENSLACG00000018452CSDE19466.998ENSHGLG00000019549-10066.998Heterocephalus_glaber_female
ENSLACG00000018452CSDE19468.773ENSHGLG00100002245-9968.773Heterocephalus_glaber_male
ENSLACG00000018452CSDE19479.777ENSHGLG00100019438-10079.777Heterocephalus_glaber_male
ENSLACG00000018452CSDE18863.757ENSHGLG00100004195-10063.757Heterocephalus_glaber_male
ENSLACG00000018452CSDE19464.888ENSHGLG00100012072-10064.888Heterocephalus_glaber_male
ENSLACG00000018452CSDE19162.939ENSHGLG00100004833-10062.857Heterocephalus_glaber_male
ENSLACG00000018452CSDE19365.000ENSHGLG00100007287-9865.000Heterocephalus_glaber_male
ENSLACG00000018452CSDE19462.035ENSHGLG00100001846-10062.035Heterocephalus_glaber_male
ENSLACG00000018452CSDE19164.254ENSHGLG00100006910-10064.254Heterocephalus_glaber_male
ENSLACG00000018452CSDE19972.951ENSHCOG00000004158csde110072.469Hippocampus_comes
ENSLACG00000018452CSDE19472.503ENSIPUG00000000355csde110072.503Ictalurus_punctatus
ENSLACG00000018452CSDE18564.746ENSSTOG00000032722-9764.746Ictidomys_tridecemlineatus
ENSLACG00000018452CSDE19464.373ENSSTOG00000030994-10064.207Ictidomys_tridecemlineatus
ENSLACG00000018452CSDE19479.653ENSJJAG00000019571Csde110079.653Jaculus_jaculus
ENSLACG00000018452CSDE19973.740ENSKMAG00000005685csde110075.092Kryptolebias_marmoratus
ENSLACG00000018452CSDE19872.055ENSLBEG00000014770csde110072.873Labrus_bergylta
ENSLACG00000018452CSDE19976.546ENSLOCG00000010413csde19678.166Lepisosteus_oculatus
ENSLACG00000018452CSDE19475.525ENSLAFG00000007150CSDE19675.525Loxodonta_africana
ENSLACG00000018452CSDE19679.294ENSMFAG00000003674CSDE19779.081Macaca_fascicularis
ENSLACG00000018452CSDE19679.294ENSMMUG00000001974CSDE19779.081Macaca_mulatta
ENSLACG00000018452CSDE19679.294ENSMNEG00000045247CSDE19779.081Macaca_nemestrina
ENSLACG00000018452CSDE19679.172ENSMLEG00000038673CSDE19778.960Mandrillus_leucophaeus
ENSLACG00000018452CSDE19873.441ENSMAMG00000008821csde110074.229Mastacembelus_armatus
ENSLACG00000018452CSDE19973.949ENSMZEG00005021675csde110073.580Maylandia_zebra
ENSLACG00000018452CSDE19380.075ENSMGAG00000016381CSDE19980.075Meleagris_gallopavo
ENSLACG00000018452CSDE19479.404ENSMAUG00000014031Csde110079.404Mesocricetus_auratus
ENSLACG00000018452CSDE19679.172ENSMICG00000002050CSDE19778.960Microcebus_murinus
ENSLACG00000018452CSDE19479.404ENSMOCG00000018960Csde110079.404Microtus_ochrogaster
ENSLACG00000018452CSDE19473.736ENSMMOG00000015075csde110073.736Mola_mola
ENSLACG00000018452CSDE19481.762ENSMODG00000004685CSDE110081.762Monodelphis_domestica
ENSLACG00000018452CSDE19473.859ENSMALG00000007132csde110073.859Monopterus_albus
ENSLACG00000018452CSDE19479.529MGP_CAROLIEiJ_G0025444Csde19292.157Mus_caroli
ENSLACG00000018452CSDE19479.653ENSMUSG00000068823Csde19786.301Mus_musculus
ENSLACG00000018452CSDE19479.529MGP_PahariEiJ_G0026888Csde19292.157Mus_pahari
ENSLACG00000018452CSDE19479.529MGP_SPRETEiJ_G0026394Csde19292.157Mus_spretus
ENSLACG00000018452CSDE19280.253ENSMPUG00000005753CSDE19980.253Mustela_putorius_furo
ENSLACG00000018452CSDE19675.152ENSMLUG00000005681CSDE19774.970Myotis_lucifugus
ENSLACG00000018452CSDE19151.974ENSNGAG00000012599-10052.308Nannospalax_galili
ENSLACG00000018452CSDE19479.280ENSNGAG00000021929Csde110079.280Nannospalax_galili
ENSLACG00000018452CSDE19473.580ENSNBRG00000020808csde110073.580Neolamprologus_brichardi
ENSLACG00000018452CSDE19679.172ENSNLEG00000004842CSDE19483.103Nomascus_leucogenys
ENSLACG00000018452CSDE19291.346ENSMEUG00000002677CSDE19591.346Notamacropus_eugenii
ENSLACG00000018452CSDE19482.353ENSOPRG00000005002CSDE17880.800Ochotona_princeps
ENSLACG00000018452CSDE19152.288ENSODEG00000005979-9852.288Octodon_degus
ENSLACG00000018452CSDE19479.653ENSODEG00000007383-10079.653Octodon_degus
ENSLACG00000018452CSDE19474.427ENSONIG00000009309csde110074.427Oreochromis_niloticus
ENSLACG00000018452CSDE17686.971ENSOANG00000003346-8286.971Ornithorhynchus_anatinus
ENSLACG00000018452CSDE19678.806ENSOCUG00000016438CSDE19778.718Oryctolagus_cuniculus
ENSLACG00000018452CSDE19970.829ENSORLG00000000707csde110073.341Oryzias_latipes
ENSLACG00000018452CSDE19972.780ENSORLG00020005148csde110073.221Oryzias_latipes_hni
ENSLACG00000018452CSDE110071.804ENSORLG00015019415csde110073.583Oryzias_latipes_hsok
ENSLACG00000018452CSDE19872.577ENSOMEG00000015656csde110073.494Oryzias_melastigma
ENSLACG00000018452CSDE19675.639ENSOGAG00000012127CSDE19775.453Otolemur_garnettii
ENSLACG00000018452CSDE19675.274ENSOARG00000020034CSDE19775.091Ovis_aries
ENSLACG00000018452CSDE19679.294ENSPPAG00000025861CSDE19483.448Pan_paniscus
ENSLACG00000018452CSDE19679.537ENSPPRG00000006747CSDE19779.323Panthera_pardus
ENSLACG00000018452CSDE19679.537ENSPTIG00000015468CSDE110080.149Panthera_tigris_altaica
ENSLACG00000018452CSDE19679.294ENSPTRG00000033721CSDE110079.901Pan_troglodytes
ENSLACG00000018452CSDE19679.294ENSPANG00000018873CSDE19779.081Papio_anubis
ENSLACG00000018452CSDE19473.333ENSPKIG00000009459csde110073.333Paramormyrops_kingsleyae
ENSLACG00000018452CSDE18789.404ENSPSIG00000003823CSDE19689.404Pelodiscus_sinensis
ENSLACG00000018452CSDE19472.660ENSPMGG00000000772csde110072.660Periophthalmus_magnuspinnatus
ENSLACG00000018452CSDE19479.653ENSPEMG00000020357-10079.653Peromyscus_maniculatus_bairdii
ENSLACG00000018452CSDE19681.197ENSPCIG00000022587CSDE110081.638Phascolarctos_cinereus
ENSLACG00000018452CSDE19975.000ENSPFOG00000012664csde110075.319Poecilia_formosa
ENSLACG00000018452CSDE19871.515ENSPLAG00000017680csde19371.515Poecilia_latipinna
ENSLACG00000018452CSDE19871.667ENSPMEG00000005094csde19571.667Poecilia_mexicana
ENSLACG00000018452CSDE19973.721ENSPREG00000011631csde110073.634Poecilia_reticulata
ENSLACG00000018452CSDE19479.777ENSPPYG00000000996CSDE110079.777Pongo_abelii
ENSLACG00000018452CSDE19684.034ENSPCAG00000014368CSDE19382.400Procavia_capensis
ENSLACG00000018452CSDE18576.493ENSPCOG00000008223-9076.493Propithecus_coquereli
ENSLACG00000018452CSDE19479.901ENSPCOG00000017893CSDE110079.901Propithecus_coquereli
ENSLACG00000018452CSDE19670.280ENSPVAG00000008225CSDE19770.133Pteropus_vampyrus
ENSLACG00000018452CSDE19973.372ENSPNYG00000013745csde110073.580Pundamilia_nyererei
ENSLACG00000018452CSDE19974.471ENSPNAG00000001958csde110074.106Pygocentrus_nattereri
ENSLACG00000018452CSDE19479.404ENSRNOG00000061058Csde110079.404Rattus_norvegicus
ENSLACG00000018452CSDE19674.818ENSRBIG00000038966-9774.638Rhinopithecus_bieti
ENSLACG00000018452CSDE19476.551ENSRBIG00000038088-9975.658Rhinopithecus_bieti
ENSLACG00000018452CSDE19679.294ENSRROG00000043101CSDE19779.081Rhinopithecus_roxellana
ENSLACG00000018452CSDE19679.172ENSSBOG00000035592CSDE19778.960Saimiri_boliviensis_boliviensis
ENSLACG00000018452CSDE19677.411ENSSHAG00000009831CSDE110077.792Sarcophilus_harrisii
ENSLACG00000018452CSDE19874.178ENSSFOG00015007498csde110076.196Scleropages_formosus
ENSLACG00000018452CSDE19972.146ENSSMAG00000007203csde110074.217Scophthalmus_maximus
ENSLACG00000018452CSDE19872.382ENSSDUG00000015380csde110073.736Seriola_dumerili
ENSLACG00000018452CSDE19973.862ENSSLDG00000008819csde110076.326Seriola_lalandi_dorsalis
ENSLACG00000018452CSDE19674.909ENSSARG00000000738CSDE19774.849Sorex_araneus
ENSLACG00000018452CSDE19680.952ENSSPUG00000008714CSDE110081.390Sphenodon_punctatus
ENSLACG00000018452CSDE19974.678ENSSPAG00000000716csde110073.983Stegastes_partitus
ENSLACG00000018452CSDE19679.659ENSSSCG00000006752CSDE19779.444Sus_scrofa
ENSLACG00000018452CSDE19479.455ENSTGUG00000000972CSDE110079.455Taeniopygia_guttata
ENSLACG00000018452CSDE19469.877ENSTRUG00000007996csde110069.667Takifugu_rubripes
ENSLACG00000018452CSDE16882.197ENSTNIG00000010878csde110082.197Tetraodon_nigroviridis
ENSLACG00000018452CSDE18588.462ENSTBEG00000011880-5388.462Tupaia_belangeri
ENSLACG00000018452CSDE19675.030ENSTTRG00000015583CSDE19774.849Tursiops_truncatus
ENSLACG00000018452CSDE18370.000ENSUAMG00000024289-9970.000Ursus_americanus
ENSLACG00000018452CSDE16787.296ENSUAMG00000021779-9987.296Ursus_americanus
ENSLACG00000018452CSDE19469.851ENSUMAG00000009720-9769.851Ursus_maritimus
ENSLACG00000018452CSDE19271.495ENSUMAG00000011714-9971.495Ursus_maritimus
ENSLACG00000018452CSDE19679.368ENSVPAG00000000749CSDE18179.002Vicugna_pacos
ENSLACG00000018452CSDE18079.300ENSVVUG00000009890CSDE19081.420Vulpes_vulpes
ENSLACG00000018452CSDE19480.395ENSXETG00000021448csde110080.395Xenopus_tropicalis
ENSLACG00000018452CSDE18987.037ENSXCOG00000000035csde18587.037Xiphophorus_couchianus
ENSLACG00000018452CSDE19974.299ENSXMAG00000009080csde110074.430Xiphophorus_maculatus

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