EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018493 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 24437 bases
Position: chrJH126593.1:3426861-3451297
Accession: 102362633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021050	KH_1	PF00013.29	1.8e-07	1	1
ENSLACP00000021050	zf-CCHC	PF00098.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021190	SF1-201	1641	XM_005988886	ENSLACP00000021050	547 (aa)	-	H3BGM9

Gene Model

Click here to download ENSLACG00000018493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018493	SF1	68	79.255	ENSAPOG00000012341	sf1	60	77.482	Acanthochromis_polyacanthus
ENSLACG00000018493	SF1	74	78.554	ENSAMEG00000017828	SF1	64	79.087	Ailuropoda_melanoleuca
ENSLACG00000018493	SF1	67	78.919	ENSACIG00000016514	sf1	62	78.378	Amphilophus_citrinellus
ENSLACG00000018493	SF1	68	78.933	ENSAOCG00000010934	sf1	60	77.184	Amphiprion_ocellaris
ENSLACG00000018493	SF1	68	78.933	ENSAPEG00000009498	sf1	60	77.184	Amphiprion_percula
ENSLACG00000018493	SF1	67	79.412	ENSATEG00000001894	sf1	60	78.102	Anabas_testudineus
ENSLACG00000018493	SF1	74	78.313	ENSANAG00000026664	-	97	77.088	Aotus_nancymaae
ENSLACG00000018493	SF1	73	70.803	ENSANAG00000022607	-	89	72.995	Aotus_nancymaae
ENSLACG00000018493	SF1	67	79.620	ENSACLG00000007633	sf1	63	77.995	Astatotilapia_calliptera
ENSLACG00000018493	SF1	67	83.424	ENSAMXG00000003630	sf1	53	81.592	Astyanax_mexicanus
ENSLACG00000018493	SF1	74	78.313	ENSBTAG00000001035	SF1	65	78.333	Bos_taurus
ENSLACG00000018493	SF1	74	78.554	ENSCJAG00000002780	SF1	65	78.333	Callithrix_jacchus
ENSLACG00000018493	SF1	74	78.554	ENSCAFG00000014239	SF1	65	78.333	Canis_familiaris
ENSLACG00000018493	SF1	74	78.554	ENSCAFG00020014381	SF1	65	78.333	Canis_lupus_dingo
ENSLACG00000018493	SF1	74	78.554	ENSCHIG00000025867	SF1	76	78.333	Capra_hircus
ENSLACG00000018493	SF1	61	86.738	ENSTSYG00000033618	SF1	83	85.563	Carlito_syrichta
ENSLACG00000018493	SF1	73	79.024	ENSCAPG00000010762	SF1	73	78.986	Cavia_aperea
ENSLACG00000018493	SF1	86	70.189	ENSCPOG00000012290	SF1	76	78.986	Cavia_porcellus
ENSLACG00000018493	SF1	74	69.118	ENSCCAG00000023781	-	84	69.191	Cebus_capucinus
ENSLACG00000018493	SF1	74	78.554	ENSCCAG00000037881	SF1	97	77.088	Cebus_capucinus
ENSLACG00000018493	SF1	74	78.554	ENSCATG00000011564	SF1	90	81.053	Cercocebus_atys
ENSLACG00000018493	SF1	74	78.554	ENSCSAG00000007258	SF1	76	78.333	Chlorocebus_sabaeus
ENSLACG00000018493	SF1	70	78.481	ENSCHOG00000006008	SF1	74	79.040	Choloepus_hoffmanni
ENSLACG00000018493	SF1	59	61.371	ENSCING00000005564	-	73	57.493	Ciona_intestinalis
ENSLACG00000018493	SF1	91	46.337	ENSCSAVG00000009055	-	72	62.333	Ciona_savignyi
ENSLACG00000018493	SF1	74	78.554	ENSCANG00000042201	SF1	90	81.053	Colobus_angolensis_palliatus
ENSLACG00000018493	SF1	87	68.819	ENSCGRG00001003677	Sf1	73	78.333	Cricetulus_griseus_chok1gshd
ENSLACG00000018493	SF1	73	79.024	ENSCGRG00000001708	Sf1	75	78.986	Cricetulus_griseus_crigri
ENSLACG00000018493	SF1	74	75.669	ENSCSEG00000014375	sf1	58	76.739	Cynoglossus_semilaevis
ENSLACG00000018493	SF1	67	81.941	ENSCVAG00000001670	sf1	64	79.012	Cyprinodon_variegatus
ENSLACG00000018493	SF1	69	83.641	ENSDARG00000008188	sf1	71	81.220	Danio_rerio
ENSLACG00000018493	SF1	74	78.795	ENSDNOG00000001282	SF1	76	78.571	Dasypus_novemcinctus
ENSLACG00000018493	SF1	86	69.533	ENSDORG00000016334	Sf1	65	78.333	Dipodomys_ordii
ENSLACG00000018493	SF1	73	71.149	ENSETEG00000012830	SF1	57	71.429	Echinops_telfairi
ENSLACG00000018493	SF1	96	44.992	ENSEBUG00000012728	sf1	54	56.965	Eptatretus_burgeri
ENSLACG00000018493	SF1	74	78.072	ENSEASG00005018272	SF1	76	77.857	Equus_asinus_asinus
ENSLACG00000018493	SF1	74	78.313	ENSECAG00000024544	SF1	76	78.095	Equus_caballus
ENSLACG00000018493	SF1	61	82.899	ENSEEUG00000001058	SF1	93	79.784	Erinaceus_europaeus
ENSLACG00000018493	SF1	74	75.485	ENSELUG00000013225	sf1	55	77.033	Esox_lucius
ENSLACG00000018493	SF1	74	78.554	ENSFCAG00000012231	SF1	65	78.333	Felis_catus
ENSLACG00000018493	SF1	73	79.024	ENSFDAG00000009833	SF1	73	78.986	Fukomys_damarensis
ENSLACG00000018493	SF1	84	68.817	ENSGMOG00000007469	sf1	72	71.703	Gadus_morhua
ENSLACG00000018493	SF1	68	79.420	ENSGAFG00000019284	sf1	76	76.214	Gambusia_affinis
ENSLACG00000018493	SF1	69	77.368	ENSGACG00000000826	sf1	73	74.941	Gasterosteus_aculeatus
ENSLACG00000018493	SF1	68	79.200	ENSHBUG00000011598	sf1	60	78.155	Haplochromis_burtoni
ENSLACG00000018493	SF1	74	78.554	ENSHGLG00000009541	SF1	73	78.333	Heterocephalus_glaber_female
ENSLACG00000018493	SF1	69	73.368	ENSHGLG00100008076	-	76	74.151	Heterocephalus_glaber_male
ENSLACG00000018493	SF1	74	69.142	ENSHGLG00100008255	-	85	67.816	Heterocephalus_glaber_male
ENSLACG00000018493	SF1	73	79.024	ENSHGLG00100013879	-	73	78.986	Heterocephalus_glaber_male
ENSLACG00000018493	SF1	73	79.024	ENSSTOG00000009790	-	65	78.986	Ictidomys_tridecemlineatus
ENSLACG00000018493	SF1	78	74.478	ENSSTOG00000024353	-	72	75.426	Ictidomys_tridecemlineatus
ENSLACG00000018493	SF1	74	78.795	ENSJJAG00000011788	Sf1	65	78.571	Jaculus_jaculus
ENSLACG00000018493	SF1	68	80.585	ENSKMAG00000005854	sf1	76	72.673	Kryptolebias_marmoratus
ENSLACG00000018493	SF1	68	78.421	ENSLBEG00000019836	sf1	65	76.978	Labrus_bergylta
ENSLACG00000018493	SF1	68	83.243	ENSLOCG00000002130	sf1	63	81.436	Lepisosteus_oculatus
ENSLACG00000018493	SF1	86	75.460	ENSLAFG00000007201	SF1	69	79.327	Loxodonta_africana
ENSLACG00000018493	SF1	74	78.554	ENSMFAG00000033122	SF1	90	81.053	Macaca_fascicularis
ENSLACG00000018493	SF1	74	78.554	ENSMMUG00000022606	SF1	99	78.450	Macaca_mulatta
ENSLACG00000018493	SF1	74	78.554	ENSMNEG00000037901	SF1	90	81.053	Macaca_nemestrina
ENSLACG00000018493	SF1	74	78.230	ENSMLEG00000040706	SF1	89	81.818	Mandrillus_leucophaeus
ENSLACG00000018493	SF1	67	79.200	ENSMAMG00000001780	sf1	60	77.184	Mastacembelus_armatus
ENSLACG00000018493	SF1	68	79.200	ENSMZEG00005009196	sf1	60	78.155	Maylandia_zebra
ENSLACG00000018493	SF1	74	78.554	ENSMAUG00000014064	Sf1	73	78.333	Mesocricetus_auratus
ENSLACG00000018493	SF1	86	69.590	ENSMICG00000001202	SF1	90	80.840	Microcebus_murinus
ENSLACG00000018493	SF1	74	78.554	ENSMOCG00000022038	Sf1	73	78.333	Microtus_ochrogaster
ENSLACG00000018493	SF1	67	79.189	ENSMMOG00000020474	sf1	74	72.200	Mola_mola
ENSLACG00000018493	SF1	74	79.087	ENSMODG00000029407	SF1	89	79.567	Monodelphis_domestica
ENSLACG00000018493	SF1	67	78.862	ENSMALG00000020521	sf1	68	77.094	Monopterus_albus
ENSLACG00000018493	SF1	87	69.742	MGP_CAROLIEiJ_G0022607	Sf1	100	89.139	Mus_caroli
ENSLACG00000018493	SF1	87	69.742	ENSMUSG00000024949	Sf1	100	89.139	Mus_musculus
ENSLACG00000018493	SF1	87	69.742	MGP_PahariEiJ_G0014101	Sf1	100	89.139	Mus_pahari
ENSLACG00000018493	SF1	87	69.742	MGP_SPRETEiJ_G0023518	Sf1	100	89.139	Mus_spretus
ENSLACG00000018493	SF1	74	78.554	ENSMPUG00000012684	SF1	64	79.327	Mustela_putorius_furo
ENSLACG00000018493	SF1	79	74.550	ENSMLUG00000029800	-	71	74.822	Myotis_lucifugus
ENSLACG00000018493	SF1	74	78.313	ENSMLUG00000015217	-	64	79.087	Myotis_lucifugus
ENSLACG00000018493	SF1	74	78.795	ENSNGAG00000005550	Sf1	73	78.571	Nannospalax_galili
ENSLACG00000018493	SF1	67	79.620	ENSNBRG00000017606	sf1	62	77.995	Neolamprologus_brichardi
ENSLACG00000018493	SF1	84	69.392	ENSNLEG00000005236	-	90	81.053	Nomascus_leucogenys
ENSLACG00000018493	SF1	61	83.768	ENSOPRG00000005008	SF1	74	79.784	Ochotona_princeps
ENSLACG00000018493	SF1	74	75.904	ENSODEG00000006102	-	66	75.714	Octodon_degus
ENSLACG00000018493	SF1	68	78.933	ENSONIG00000015728	sf1	60	77.913	Oreochromis_niloticus
ENSLACG00000018493	SF1	62	77.429	ENSOANG00000002909	SF1	84	78.409	Ornithorhynchus_anatinus
ENSLACG00000018493	SF1	74	78.554	ENSOCUG00000026486	SF1	65	79.087	Oryctolagus_cuniculus
ENSLACG00000018493	SF1	71	78.974	ENSORLG00000011853	sf1	60	76.867	Oryzias_latipes
ENSLACG00000018493	SF1	74	78.554	ENSOARG00000009166	SF1	73	78.333	Ovis_aries
ENSLACG00000018493	SF1	74	78.313	ENSPPAG00000002799	-	98	78.019	Pan_paniscus
ENSLACG00000018493	SF1	74	78.502	ENSPPRG00000013566	SF1	64	79.950	Panthera_pardus
ENSLACG00000018493	SF1	74	78.554	ENSPTIG00000016141	SF1	74	79.087	Panthera_tigris_altaica
ENSLACG00000018493	SF1	75	78.723	ENSPTRG00000003846	SF1	97	78.333	Pan_troglodytes
ENSLACG00000018493	SF1	74	78.554	ENSPANG00000020754	SF1	90	81.053	Papio_anubis
ENSLACG00000018493	SF1	61	78.841	ENSPKIG00000012116	sf1	88	76.966	Paramormyrops_kingsleyae
ENSLACG00000018493	SF1	57	87.107	ENSPSIG00000003610	SF1	60	88.449	Pelodiscus_sinensis
ENSLACG00000018493	SF1	74	78.554	ENSPEMG00000010463	Sf1	73	78.333	Peromyscus_maniculatus_bairdii
ENSLACG00000018493	SF1	74	79.277	ENSPCIG00000018173	SF1	67	79.048	Phascolarctos_cinereus
ENSLACG00000018493	SF1	74	78.554	ENSPPYG00000003098	-	78	78.333	Pongo_abelii
ENSLACG00000018493	SF1	74	78.261	ENSPCAG00000013631	SF1	61	78.795	Procavia_capensis
ENSLACG00000018493	SF1	86	69.590	ENSPCOG00000027546	SF1	90	80.840	Propithecus_coquereli
ENSLACG00000018493	SF1	74	78.744	ENSPVAG00000016938	SF1	62	79.277	Pteropus_vampyrus
ENSLACG00000018493	SF1	67	79.570	ENSPNYG00000004673	sf1	60	78.345	Pundamilia_nyererei
ENSLACG00000018493	SF1	68	82.480	ENSPNAG00000013072	sf1	60	80.988	Pygocentrus_nattereri
ENSLACG00000018493	SF1	87	69.742	ENSRNOG00000021085	Sf1	69	83.429	Rattus_norvegicus
ENSLACG00000018493	SF1	74	78.554	ENSRBIG00000042818	SF1	90	81.053	Rhinopithecus_bieti
ENSLACG00000018493	SF1	74	78.261	ENSRROG00000045655	SF1	89	81.818	Rhinopithecus_roxellana
ENSLACG00000018493	SF1	51	40.484	YLR116W	MSL5	60	40.273	Saccharomyces_cerevisiae
ENSLACG00000018493	SF1	87	60.269	ENSSBOG00000022267	-	98	63.549	Saimiri_boliviensis_boliviensis
ENSLACG00000018493	SF1	84	74.565	ENSSHAG00000006841	SF1	75	80.846	Sarcophilus_harrisii
ENSLACG00000018493	SF1	75	75.887	ENSSMAG00000007549	sf1	64	76.123	Scophthalmus_maximus
ENSLACG00000018493	SF1	69	77.690	ENSSDUG00000003903	sf1	63	76.794	Seriola_dumerili
ENSLACG00000018493	SF1	73	74.878	ENSSARG00000008180	SF1	79	74.879	Sorex_araneus
ENSLACG00000018493	SF1	68	79.200	ENSSPAG00000019060	sf1	60	77.427	Stegastes_partitus
ENSLACG00000018493	SF1	74	78.554	ENSSSCG00000013021	SF1	76	78.333	Sus_scrofa
ENSLACG00000018493	SF1	85	58.333	ENSTNIG00000004820	sf1	79	66.667	Tetraodon_nigroviridis
ENSLACG00000018493	SF1	75	68.868	ENSTBEG00000013133	SF1	61	70.353	Tupaia_belangeri
ENSLACG00000018493	SF1	73	72.530	ENSTTRG00000008857	SF1	75	73.671	Tursiops_truncatus
ENSLACG00000018493	SF1	54	82.781	ENSUAMG00000011977	SF1	57	83.498	Ursus_americanus
ENSLACG00000018493	SF1	74	78.554	ENSUMAG00000007268	SF1	79	79.087	Ursus_maritimus
ENSLACG00000018493	SF1	74	78.554	ENSVVUG00000028585	SF1	76	78.333	Vulpes_vulpes
ENSLACG00000018493	SF1	87	68.588	ENSXETG00000008434	sf1	66	75.300	Xenopus_tropicalis
ENSLACG00000018493	SF1	66	80.274	ENSXCOG00000003704	sf1	75	78.856	Xiphophorus_couchianus
ENSLACG00000018493	SF1	68	79.101	ENSXMAG00000007822	sf1	63	77.885	Xiphophorus_maculatus