EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018557 (Gene tree)
Gene ID: 102359187
Gene Symbol: POLR3A
Alias: RPC1|RPC155|hRPC155
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 78146 bases
Position: chrJH126584.1:3584573-3662718
Accession: 102359187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021121	RNA_pol_Rpb1_5	PF04998.17	9.5e-89	1	1
ENSLACP00000021121	RNA_pol_Rpb1_4	PF05000.17	2.6e-32	1	1
ENSLACP00000021121	RNA_pol_Rpb1_2	PF00623.20	2e-73	1	1
ENSLACP00000021121	RNA_pol_Rpb1_3	PF04983.18	1.1e-41	1	1
ENSLACP00000021121	RNA_pol_Rpb1_1	PF04997.12	5.8e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021261	POLR3A-201	4198	XM_005988268	ENSLACP00000021121	1355 (aa)	-	H3BGV0

Gene Model

Click here to download ENSLACG00000018557's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03020	RNA polymerase	KEGG
lcm04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018557	POLR3A	99	89.814	ENSG00000148606	POLR3A	98	94.304	Homo_sapiens
ENSLACG00000018557	POLR3A	64	83.333	ENSAPOG00000022727	polr3a	99	83.333	Acanthochromis_polyacanthus
ENSLACG00000018557	POLR3A	99	89.763	ENSAMEG00000017801	POLR3A	97	89.763	Ailuropoda_melanoleuca
ENSLACG00000018557	POLR3A	96	88.000	ENSACIG00000024504	polr3a	97	88.000	Amphilophus_citrinellus
ENSLACG00000018557	POLR3A	99	84.758	ENSAOCG00000003949	-	96	84.758	Amphiprion_ocellaris
ENSLACG00000018557	POLR3A	99	88.178	ENSAOCG00000002071	polr3a	97	88.178	Amphiprion_ocellaris
ENSLACG00000018557	POLR3A	99	88.178	ENSAPEG00000013351	polr3a	97	88.178	Amphiprion_percula
ENSLACG00000018557	POLR3A	99	88.178	ENSAPEG00000001966	-	97	88.178	Amphiprion_percula
ENSLACG00000018557	POLR3A	99	88.030	ENSATEG00000023277	polr3a	97	88.030	Anabas_testudineus
ENSLACG00000018557	POLR3A	98	90.451	ENSAPLG00000015878	POLR3A	96	90.451	Anas_platyrhynchos
ENSLACG00000018557	POLR3A	96	88.338	ENSACAG00000007985	POLR3A	99	88.338	Anolis_carolinensis
ENSLACG00000018557	POLR3A	99	87.073	ENSANAG00000028922	POLR3A	96	94.904	Aotus_nancymaae
ENSLACG00000018557	POLR3A	99	87.807	ENSACLG00000005914	polr3a	99	86.751	Astatotilapia_calliptera
ENSLACG00000018557	POLR3A	99	84.907	ENSAMXG00000018852	polr3a	96	84.907	Astyanax_mexicanus
ENSLACG00000018557	POLR3A	99	89.963	ENSBTAG00000013259	POLR3A	97	89.963	Bos_taurus
ENSLACG00000018557	POLR3A	99	55.419	WBGene00004411	rpc-1	97	55.419	Caenorhabditis_elegans
ENSLACG00000018557	POLR3A	99	89.740	ENSCJAG00000001015	POLR3A	96	94.304	Callithrix_jacchus
ENSLACG00000018557	POLR3A	99	89.888	ENSCAFG00000015546	POLR3A	97	89.888	Canis_familiaris
ENSLACG00000018557	POLR3A	99	89.888	ENSCAFG00020014711	POLR3A	97	89.888	Canis_lupus_dingo
ENSLACG00000018557	POLR3A	99	89.814	ENSCHIG00000000352	POLR3A	97	89.814	Capra_hircus
ENSLACG00000018557	POLR3A	99	89.294	ENSTSYG00000006671	POLR3A	97	89.294	Carlito_syrichta
ENSLACG00000018557	POLR3A	98	89.098	ENSCAPG00000016031	POLR3A	97	89.098	Cavia_aperea
ENSLACG00000018557	POLR3A	99	89.071	ENSCPOG00000022387	POLR3A	97	89.071	Cavia_porcellus
ENSLACG00000018557	POLR3A	99	88.178	ENSCCAG00000032995	POLR3A	96	94.304	Cebus_capucinus
ENSLACG00000018557	POLR3A	99	89.814	ENSCATG00000035842	POLR3A	98	94.304	Cercocebus_atys
ENSLACG00000018557	POLR3A	99	89.145	ENSCLAG00000009629	POLR3A	97	89.145	Chinchilla_lanigera
ENSLACG00000018557	POLR3A	99	89.814	ENSCSAG00000009292	POLR3A	97	89.814	Chlorocebus_sabaeus
ENSLACG00000018557	POLR3A	82	83.243	ENSCHOG00000008368	POLR3A	93	83.243	Choloepus_hoffmanni
ENSLACG00000018557	POLR3A	99	90.186	ENSCPBG00000002079	POLR3A	97	90.186	Chrysemys_picta_bellii
ENSLACG00000018557	POLR3A	99	67.558	ENSCSAVG00000009925	-	97	67.558	Ciona_savignyi
ENSLACG00000018557	POLR3A	83	88.000	ENSCANG00000041071	POLR3A	98	93.671	Colobus_angolensis_palliatus
ENSLACG00000018557	POLR3A	80	92.949	ENSCGRG00001015599	-	92	92.949	Cricetulus_griseus_chok1gshd
ENSLACG00000018557	POLR3A	90	87.622	ENSCGRG00000001019	Polr3a	100	87.622	Cricetulus_griseus_crigri
ENSLACG00000018557	POLR3A	99	88.401	ENSCSEG00000016653	polr3a	97	88.401	Cynoglossus_semilaevis
ENSLACG00000018557	POLR3A	99	87.658	ENSCVAG00000023049	polr3a	97	87.658	Cyprinodon_variegatus
ENSLACG00000018557	POLR3A	99	87.881	ENSDARG00000102569	polr3a	97	87.881	Danio_rerio
ENSLACG00000018557	POLR3A	99	89.145	ENSDNOG00000010194	POLR3A	97	89.145	Dasypus_novemcinctus
ENSLACG00000018557	POLR3A	99	89.814	ENSDORG00000000184	Polr3a	97	89.814	Dipodomys_ordii
ENSLACG00000018557	POLR3A	99	56.454	FBgn0030687	CG17209	97	56.329	Drosophila_melanogaster
ENSLACG00000018557	POLR3A	86	94.472	ENSETEG00000007477	POLR3A	85	94.472	Echinops_telfairi
ENSLACG00000018557	POLR3A	61	73.450	ENSEBUG00000013761	polr3a	98	73.333	Eptatretus_burgeri
ENSLACG00000018557	POLR3A	99	89.814	ENSEASG00005023053	POLR3A	97	89.814	Equus_asinus_asinus
ENSLACG00000018557	POLR3A	99	89.591	ENSECAG00000019416	POLR3A	99	89.591	Equus_caballus
ENSLACG00000018557	POLR3A	99	85.927	ENSEEUG00000001774	POLR3A	100	85.778	Erinaceus_europaeus
ENSLACG00000018557	POLR3A	99	85.895	ENSELUG00000014016	polr3a	97	85.895	Esox_lucius
ENSLACG00000018557	POLR3A	99	89.888	ENSFCAG00000000843	POLR3A	97	89.888	Felis_catus
ENSLACG00000018557	POLR3A	99	90.342	ENSFALG00000006913	POLR3A	97	90.342	Ficedula_albicollis
ENSLACG00000018557	POLR3A	99	89.219	ENSFDAG00000007813	POLR3A	97	89.219	Fukomys_damarensis
ENSLACG00000018557	POLR3A	99	79.554	ENSFHEG00000011922	polr3a	96	79.480	Fundulus_heteroclitus
ENSLACG00000018557	POLR3A	99	83.614	ENSGMOG00000000291	polr3a	96	83.614	Gadus_morhua
ENSLACG00000018557	POLR3A	99	90.483	ENSGALG00000004947	POLR3A	97	90.483	Gallus_gallus
ENSLACG00000018557	POLR3A	99	88.104	ENSGAFG00000005112	polr3a	97	88.104	Gambusia_affinis
ENSLACG00000018557	POLR3A	99	87.361	ENSGACG00000002304	polr3a	97	87.361	Gasterosteus_aculeatus
ENSLACG00000018557	POLR3A	98	89.744	ENSGAGG00000010386	POLR3A	99	89.744	Gopherus_agassizii
ENSLACG00000018557	POLR3A	99	88.648	ENSGGOG00000027729	POLR3A	98	94.304	Gorilla_gorilla
ENSLACG00000018557	POLR3A	99	87.732	ENSHBUG00000018098	polr3a	97	87.732	Haplochromis_burtoni
ENSLACG00000018557	POLR3A	99	89.145	ENSHGLG00000017899	POLR3A	97	89.145	Heterocephalus_glaber_female
ENSLACG00000018557	POLR3A	99	89.145	ENSHGLG00100008483	POLR3A	97	89.145	Heterocephalus_glaber_male
ENSLACG00000018557	POLR3A	99	87.435	ENSHCOG00000001075	polr3a	97	87.435	Hippocampus_comes
ENSLACG00000018557	POLR3A	99	89.814	ENSSTOG00000012983	POLR3A	97	89.814	Ictidomys_tridecemlineatus
ENSLACG00000018557	POLR3A	99	88.104	ENSKMAG00000015290	polr3a	97	88.104	Kryptolebias_marmoratus
ENSLACG00000018557	POLR3A	99	87.212	ENSLBEG00000017214	polr3a	97	87.212	Labrus_bergylta
ENSLACG00000018557	POLR3A	99	89.243	ENSLOCG00000004942	polr3a	97	89.243	Lepisosteus_oculatus
ENSLACG00000018557	POLR3A	99	88.113	ENSLAFG00000016719	POLR3A	97	88.113	Loxodonta_africana
ENSLACG00000018557	POLR3A	99	89.740	ENSMFAG00000032218	POLR3A	96	94.304	Macaca_fascicularis
ENSLACG00000018557	POLR3A	99	89.740	ENSMMUG00000005514	POLR3A	98	94.304	Macaca_mulatta
ENSLACG00000018557	POLR3A	99	82.939	ENSMNEG00000035163	POLR3A	99	88.642	Macaca_nemestrina
ENSLACG00000018557	POLR3A	99	85.799	ENSMLEG00000030014	POLR3A	98	94.304	Mandrillus_leucophaeus
ENSLACG00000018557	POLR3A	99	88.253	ENSMAMG00000017497	polr3a	97	88.253	Mastacembelus_armatus
ENSLACG00000018557	POLR3A	99	87.807	ENSMZEG00005000576	polr3a	97	87.807	Maylandia_zebra
ENSLACG00000018557	POLR3A	99	71.586	ENSMGAG00000005713	-	97	71.586	Meleagris_gallopavo
ENSLACG00000018557	POLR3A	99	87.435	ENSMAUG00000016247	Polr3a	97	87.435	Mesocricetus_auratus
ENSLACG00000018557	POLR3A	99	89.814	ENSMICG00000005937	POLR3A	96	93.297	Microcebus_murinus
ENSLACG00000018557	POLR3A	99	89.665	ENSMOCG00000012185	Polr3a	97	89.665	Microtus_ochrogaster
ENSLACG00000018557	POLR3A	99	87.435	ENSMMOG00000013822	polr3a	97	87.435	Mola_mola
ENSLACG00000018557	POLR3A	99	89.442	ENSMODG00000001036	POLR3A	97	89.442	Monodelphis_domestica
ENSLACG00000018557	POLR3A	99	87.584	ENSMALG00000001249	polr3a	97	87.584	Monopterus_albus
ENSLACG00000018557	POLR3A	99	89.740	MGP_CAROLIEiJ_G0019016	Polr3a	97	89.740	Mus_caroli
ENSLACG00000018557	POLR3A	99	89.740	ENSMUSG00000025280	Polr3a	97	89.740	Mus_musculus
ENSLACG00000018557	POLR3A	99	89.814	MGP_PahariEiJ_G0030029	Polr3a	97	89.814	Mus_pahari
ENSLACG00000018557	POLR3A	99	87.138	MGP_SPRETEiJ_G0019894	Polr3a	93	96.040	Mus_spretus
ENSLACG00000018557	POLR3A	99	89.241	ENSMPUG00000003790	POLR3A	97	89.241	Mustela_putorius_furo
ENSLACG00000018557	POLR3A	99	88.922	ENSMLUG00000011522	POLR3A	97	88.922	Myotis_lucifugus
ENSLACG00000018557	POLR3A	99	88.030	ENSNGAG00000015863	Polr3a	97	88.030	Nannospalax_galili
ENSLACG00000018557	POLR3A	99	86.617	ENSNBRG00000014262	polr3a	96	86.617	Neolamprologus_brichardi
ENSLACG00000018557	POLR3A	85	85.895	ENSNLEG00000010501	POLR3A	84	85.895	Nomascus_leucogenys
ENSLACG00000018557	POLR3A	98	76.165	ENSMEUG00000012446	POLR3A	97	76.165	Notamacropus_eugenii
ENSLACG00000018557	POLR3A	99	85.428	ENSOPRG00000001880	-	97	85.428	Ochotona_princeps
ENSLACG00000018557	POLR3A	99	88.476	ENSODEG00000015146	POLR3A	97	88.476	Octodon_degus
ENSLACG00000018557	POLR3A	99	88.178	ENSONIG00000016129	polr3a	97	88.178	Oreochromis_niloticus
ENSLACG00000018557	POLR3A	98	89.124	ENSOANG00000007013	POLR3A	96	89.124	Ornithorhynchus_anatinus
ENSLACG00000018557	POLR3A	99	89.665	ENSOCUG00000012450	POLR3A	97	89.665	Oryctolagus_cuniculus
ENSLACG00000018557	POLR3A	99	87.658	ENSORLG00000008958	polr3a	97	87.658	Oryzias_latipes
ENSLACG00000018557	POLR3A	99	87.732	ENSORLG00020007525	polr3a	98	87.732	Oryzias_latipes_hni
ENSLACG00000018557	POLR3A	99	87.658	ENSORLG00015006633	polr3a	97	87.658	Oryzias_latipes_hsok
ENSLACG00000018557	POLR3A	99	87.286	ENSOMEG00000012865	polr3a	97	87.286	Oryzias_melastigma
ENSLACG00000018557	POLR3A	99	89.740	ENSOGAG00000010995	POLR3A	97	89.740	Otolemur_garnettii
ENSLACG00000018557	POLR3A	99	89.822	ENSOARG00000009656	POLR3A	97	89.822	Ovis_aries
ENSLACG00000018557	POLR3A	99	89.888	ENSPPRG00000002128	POLR3A	97	89.888	Panthera_pardus
ENSLACG00000018557	POLR3A	99	89.888	ENSPTIG00000020916	POLR3A	97	89.888	Panthera_tigris_altaica
ENSLACG00000018557	POLR3A	99	89.740	ENSPTRG00000002664	POLR3A	98	94.304	Pan_troglodytes
ENSLACG00000018557	POLR3A	99	89.740	ENSPANG00000022508	POLR3A	98	94.304	Papio_anubis
ENSLACG00000018557	POLR3A	99	88.625	ENSPKIG00000008140	polr3a	96	90.019	Paramormyrops_kingsleyae
ENSLACG00000018557	POLR3A	98	89.577	ENSPSIG00000002092	POLR3A	97	89.577	Pelodiscus_sinensis
ENSLACG00000018557	POLR3A	99	89.442	ENSPEMG00000006768	Polr3a	97	89.442	Peromyscus_maniculatus_bairdii
ENSLACG00000018557	POLR3A	99	89.219	ENSPCIG00000015842	POLR3A	97	89.219	Phascolarctos_cinereus
ENSLACG00000018557	POLR3A	51	91.392	ENSPFOG00000006458	polr3a	94	91.392	Poecilia_formosa
ENSLACG00000018557	POLR3A	99	88.030	ENSPLAG00000000997	polr3a	97	88.030	Poecilia_latipinna
ENSLACG00000018557	POLR3A	99	87.955	ENSPMEG00000006821	polr3a	97	87.955	Poecilia_mexicana
ENSLACG00000018557	POLR3A	99	88.104	ENSPREG00000002385	polr3a	97	88.104	Poecilia_reticulata
ENSLACG00000018557	POLR3A	92	89.486	ENSPPYG00000002305	POLR3A	96	89.486	Pongo_abelii
ENSLACG00000018557	POLR3A	87	76.579	ENSPCAG00000005690	POLR3A	87	76.579	Procavia_capensis
ENSLACG00000018557	POLR3A	99	89.740	ENSPCOG00000028311	POLR3A	97	89.740	Propithecus_coquereli
ENSLACG00000018557	POLR3A	99	88.253	ENSPVAG00000015553	POLR3A	97	88.253	Pteropus_vampyrus
ENSLACG00000018557	POLR3A	99	87.807	ENSPNYG00000020987	polr3a	97	87.807	Pundamilia_nyererei
ENSLACG00000018557	POLR3A	99	84.015	ENSPNAG00000006629	polr3a	96	84.015	Pygocentrus_nattereri
ENSLACG00000018557	POLR3A	99	89.814	ENSRNOG00000010008	Polr3a	97	89.814	Rattus_norvegicus
ENSLACG00000018557	POLR3A	99	85.874	ENSRBIG00000034967	POLR3A	98	94.304	Rhinopithecus_bieti
ENSLACG00000018557	POLR3A	99	89.814	ENSRROG00000025527	POLR3A	98	94.304	Rhinopithecus_roxellana
ENSLACG00000018557	POLR3A	99	49.471	YOR116C	RPO31	96	49.087	Saccharomyces_cerevisiae
ENSLACG00000018557	POLR3A	99	89.814	ENSSBOG00000022199	POLR3A	95	94.304	Saimiri_boliviensis_boliviensis
ENSLACG00000018557	POLR3A	99	89.071	ENSSHAG00000007588	POLR3A	91	89.071	Sarcophilus_harrisii
ENSLACG00000018557	POLR3A	99	88.996	ENSSFOG00015014357	polr3a	97	88.996	Scleropages_formosus
ENSLACG00000018557	POLR3A	99	88.030	ENSSMAG00000001780	polr3a	97	88.030	Scophthalmus_maximus
ENSLACG00000018557	POLR3A	99	88.401	ENSSDUG00000019840	polr3a	97	88.401	Seriola_dumerili
ENSLACG00000018557	POLR3A	99	88.401	ENSSLDG00000023908	polr3a	97	88.401	Seriola_lalandi_dorsalis
ENSLACG00000018557	POLR3A	67	92.812	ENSSARG00000009916	POLR3A	85	92.812	Sorex_araneus
ENSLACG00000018557	POLR3A	99	88.401	ENSSPUG00000013209	POLR3A	96	88.401	Sphenodon_punctatus
ENSLACG00000018557	POLR3A	99	88.253	ENSSPAG00000017712	polr3a	97	88.253	Stegastes_partitus
ENSLACG00000018557	POLR3A	92	100.000	ENSSSCG00000010327	POLR3A	96	100.000	Sus_scrofa
ENSLACG00000018557	POLR3A	99	90.186	ENSTGUG00000006423	-	97	90.186	Taeniopygia_guttata
ENSLACG00000018557	POLR3A	99	87.361	ENSTRUG00000013488	polr3a	97	87.361	Takifugu_rubripes
ENSLACG00000018557	POLR3A	99	87.602	ENSTNIG00000013151	polr3a	97	87.602	Tetraodon_nigroviridis
ENSLACG00000018557	POLR3A	68	92.553	ENSTBEG00000015288	POLR3A	68	92.553	Tupaia_belangeri
ENSLACG00000018557	POLR3A	95	89.207	ENSTTRG00000007817	POLR3A	96	89.207	Tursiops_truncatus
ENSLACG00000018557	POLR3A	99	87.509	ENSUAMG00000011283	POLR3A	97	87.509	Ursus_americanus
ENSLACG00000018557	POLR3A	99	89.963	ENSUMAG00000013913	POLR3A	97	89.963	Ursus_maritimus
ENSLACG00000018557	POLR3A	98	81.278	ENSVPAG00000003285	POLR3A	97	81.278	Vicugna_pacos
ENSLACG00000018557	POLR3A	99	89.814	ENSVVUG00000025523	POLR3A	97	89.814	Vulpes_vulpes
ENSLACG00000018557	POLR3A	88	87.500	ENSXETG00000018101	polr3a	100	87.500	Xenopus_tropicalis
ENSLACG00000018557	POLR3A	99	88.178	ENSXMAG00000015213	polr3a	98	88.045	Xiphophorus_maculatus