EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018598 (Gene tree)
Gene ID: 102363259
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 9447 bases
Position: chrJH126570.1:3722840-3732286
Accession: 102363259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021169	PseudoU_synth_1	PF01416.20	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021309	PUS1-201	1852	XM_005987177	ENSLACP00000021169	402 (aa)	XP_005987239	H3BGZ8

Gene Model

Click here to download ENSLACG00000018598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018598	PUS1	80	57.944	ENSLACG00000016044	-	97	57.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018598	PUS1	99	69.727	ENSG00000177192	PUS1	98	72.823	Homo_sapiens
ENSLACG00000018598	PUS1	94	64.908	ENSAPOG00000007254	pus1	86	66.575	Acanthochromis_polyacanthus
ENSLACG00000018598	PUS1	90	73.889	ENSAMEG00000013715	PUS1	86	73.889	Ailuropoda_melanoleuca
ENSLACG00000018598	PUS1	94	65.963	ENSACIG00000009169	pus1	88	67.308	Amphilophus_citrinellus
ENSLACG00000018598	PUS1	94	66.491	ENSAOCG00000022207	pus1	85	68.611	Amphiprion_ocellaris
ENSLACG00000018598	PUS1	94	66.491	ENSAPEG00000006039	pus1	92	68.611	Amphiprion_percula
ENSLACG00000018598	PUS1	94	64.908	ENSATEG00000020688	pus1	92	66.575	Anabas_testudineus
ENSLACG00000018598	PUS1	88	78.125	ENSACAG00000007367	PUS1	94	78.125	Anolis_carolinensis
ENSLACG00000018598	PUS1	82	75.076	ENSANAG00000036192	PUS1	94	78.571	Aotus_nancymaae
ENSLACG00000018598	PUS1	95	65.617	ENSACLG00000020868	pus1	93	67.403	Astatotilapia_calliptera
ENSLACG00000018598	PUS1	94	66.755	ENSAMXG00000008710	pus1	83	68.508	Astyanax_mexicanus
ENSLACG00000018598	PUS1	95	71.429	ENSBTAG00000012990	PUS1	87	74.930	Bos_taurus
ENSLACG00000018598	PUS1	82	39.766	WBGene00004248	pus-1	81	39.766	Caenorhabditis_elegans
ENSLACG00000018598	PUS1	63	77.559	ENSCJAG00000003720	PUS1	72	76.426	Callithrix_jacchus
ENSLACG00000018598	PUS1	93	72.118	ENSCAFG00000006429	PUS1	95	70.312	Canis_familiaris
ENSLACG00000018598	PUS1	93	72.118	ENSCAFG00020010737	PUS1	81	74.366	Canis_lupus_dingo
ENSLACG00000018598	PUS1	95	71.429	ENSCHIG00000000487	PUS1	87	74.930	Capra_hircus
ENSLACG00000018598	PUS1	91	74.044	ENSTSYG00000032605	PUS1	93	77.101	Carlito_syrichta
ENSLACG00000018598	PUS1	74	79.195	ENSCAPG00000006421	PUS1	94	79.139	Cavia_aperea
ENSLACG00000018598	PUS1	81	78.287	ENSCPOG00000001027	PUS1	78	78.248	Cavia_porcellus
ENSLACG00000018598	PUS1	92	72.973	ENSCCAG00000015879	PUS1	86	77.742	Cebus_capucinus
ENSLACG00000018598	PUS1	97	70.769	ENSCATG00000032870	PUS1	83	78.947	Cercocebus_atys
ENSLACG00000018598	PUS1	92	71.622	ENSCLAG00000011689	PUS1	83	73.446	Chinchilla_lanigera
ENSLACG00000018598	PUS1	97	71.026	ENSCSAG00000001879	PUS1	83	74.380	Chlorocebus_sabaeus
ENSLACG00000018598	PUS1	78	81.731	ENSCPBG00000024715	PUS1	89	81.470	Chrysemys_picta_bellii
ENSLACG00000018598	PUS1	87	45.429	ENSCING00000009426	-	90	46.018	Ciona_intestinalis
ENSLACG00000018598	PUS1	84	41.761	ENSCSAVG00000003751	-	67	43.963	Ciona_savignyi
ENSLACG00000018598	PUS1	96	63.566	ENSCANG00000035561	PUS1	83	71.661	Colobus_angolensis_palliatus
ENSLACG00000018598	PUS1	92	73.585	ENSCGRG00001019592	Pus1	82	76.571	Cricetulus_griseus_chok1gshd
ENSLACG00000018598	PUS1	92	73.585	ENSCGRG00000004048	Pus1	89	76.571	Cricetulus_griseus_crigri
ENSLACG00000018598	PUS1	97	61.954	ENSCSEG00000003629	pus1	86	64.835	Cynoglossus_semilaevis
ENSLACG00000018598	PUS1	94	65.963	ENSCVAG00000001265	pus1	86	67.582	Cyprinodon_variegatus
ENSLACG00000018598	PUS1	94	64.116	ENSDARG00000045562	pus1	96	67.910	Danio_rerio
ENSLACG00000018598	PUS1	85	73.099	ENSDNOG00000045576	PUS1	94	74.837	Dasypus_novemcinctus
ENSLACG00000018598	PUS1	82	76.292	ENSDORG00000011455	Pus1	95	79.288	Dipodomys_ordii
ENSLACG00000018598	PUS1	93	42.967	FBgn0038811	PUS1	88	44.118	Drosophila_melanogaster
ENSLACG00000018598	PUS1	92	70.106	ENSETEG00000019160	PUS1	94	69.251	Echinops_telfairi
ENSLACG00000018598	PUS1	88	42.744	ENSEBUG00000000368	-	67	43.370	Eptatretus_burgeri
ENSLACG00000018598	PUS1	95	71.466	ENSEASG00005016535	PUS1	81	75.211	Equus_asinus_asinus
ENSLACG00000018598	PUS1	95	71.728	ENSECAG00000006965	PUS1	88	75.493	Equus_caballus
ENSLACG00000018598	PUS1	94	65.435	ENSELUG00000010424	pus1	92	67.127	Esox_lucius
ENSLACG00000018598	PUS1	92	71.850	ENSFCAG00000010780	PUS1	82	74.648	Felis_catus
ENSLACG00000018598	PUS1	98	72.864	ENSFALG00000008273	PUS1	93	72.864	Ficedula_albicollis
ENSLACG00000018598	PUS1	90	75.000	ENSFDAG00000012518	PUS1	86	75.354	Fukomys_damarensis
ENSLACG00000018598	PUS1	94	66.491	ENSFHEG00000010504	pus1	87	68.132	Fundulus_heteroclitus
ENSLACG00000018598	PUS1	92	64.151	ENSGMOG00000008143	pus1	92	65.738	Gadus_morhua
ENSLACG00000018598	PUS1	94	74.670	ENSGALG00000002354	PUS1	89	75.616	Gallus_gallus
ENSLACG00000018598	PUS1	94	66.227	ENSGAFG00000006578	pus1	86	68.232	Gambusia_affinis
ENSLACG00000018598	PUS1	95	64.567	ENSGACG00000017566	pus1	92	66.667	Gasterosteus_aculeatus
ENSLACG00000018598	PUS1	81	78.395	ENSGAGG00000016730	-	90	79.872	Gopherus_agassizii
ENSLACG00000018598	PUS1	91	73.569	ENSGGOG00000009178	PUS1	81	79.605	Gorilla_gorilla
ENSLACG00000018598	PUS1	95	66.142	ENSHBUG00000001316	pus1	92	67.956	Haplochromis_burtoni
ENSLACG00000018598	PUS1	88	71.875	ENSHGLG00000016086	PUS1	88	73.392	Heterocephalus_glaber_female
ENSLACG00000018598	PUS1	88	71.875	ENSHGLG00100019362	PUS1	88	73.392	Heterocephalus_glaber_male
ENSLACG00000018598	PUS1	94	62.533	ENSHCOG00000014288	pus1	83	64.463	Hippocampus_comes
ENSLACG00000018598	PUS1	94	68.783	ENSIPUG00000010387	pus1	89	70.637	Ictalurus_punctatus
ENSLACG00000018598	PUS1	87	74.857	ENSSTOG00000011245	PUS1	82	74.857	Ictidomys_tridecemlineatus
ENSLACG00000018598	PUS1	91	72.554	ENSJJAG00000000088	Pus1	81	76.093	Jaculus_jaculus
ENSLACG00000018598	PUS1	94	64.380	ENSKMAG00000012702	pus1	87	66.022	Kryptolebias_marmoratus
ENSLACG00000018598	PUS1	97	64.615	ENSLBEG00000002845	pus1	90	66.213	Labrus_bergylta
ENSLACG00000018598	PUS1	96	71.688	ENSLOCG00000006127	pus1	92	73.901	Lepisosteus_oculatus
ENSLACG00000018598	PUS1	92	69.811	ENSLAFG00000028731	PUS1	93	72.622	Loxodonta_africana
ENSLACG00000018598	PUS1	97	71.026	ENSMFAG00000041194	PUS1	88	74.380	Macaca_fascicularis
ENSLACG00000018598	PUS1	97	70.769	ENSMMUG00000031463	PUS1	87	79.276	Macaca_mulatta
ENSLACG00000018598	PUS1	97	71.026	ENSMNEG00000002814	PUS1	83	79.276	Macaca_nemestrina
ENSLACG00000018598	PUS1	82	75.076	ENSMLEG00000043560	PUS1	93	79.470	Mandrillus_leucophaeus
ENSLACG00000018598	PUS1	100	62.035	ENSMAMG00000007371	pus1	88	64.456	Mastacembelus_armatus
ENSLACG00000018598	PUS1	95	65.879	ENSMZEG00005017746	pus1	86	67.680	Maylandia_zebra
ENSLACG00000018598	PUS1	82	78.116	ENSMGAG00000001958	PUS1	95	80.255	Meleagris_gallopavo
ENSLACG00000018598	PUS1	92	72.776	ENSMAUG00000001482	Pus1	82	75.714	Mesocricetus_auratus
ENSLACG00000018598	PUS1	95	71.615	ENSMICG00000030980	PUS1	86	76.056	Microcebus_murinus
ENSLACG00000018598	PUS1	92	73.046	ENSMOCG00000022311	Pus1	82	76.000	Microtus_ochrogaster
ENSLACG00000018598	PUS1	99	62.500	ENSMMOG00000021022	pus1	92	65.840	Mola_mola
ENSLACG00000018598	PUS1	87	75.358	ENSMODG00000015551	PUS1	82	73.913	Monodelphis_domestica
ENSLACG00000018598	PUS1	94	64.116	ENSMALG00000013202	pus1	87	65.833	Monopterus_albus
ENSLACG00000018598	PUS1	92	73.046	MGP_CAROLIEiJ_G0027551	Pus1	89	76.000	Mus_caroli
ENSLACG00000018598	PUS1	92	73.046	ENSMUSG00000029507	Pus1	89	76.000	Mus_musculus
ENSLACG00000018598	PUS1	92	73.243	MGP_PahariEiJ_G0024133	Pus1	88	76.218	Mus_pahari
ENSLACG00000018598	PUS1	92	73.046	MGP_SPRETEiJ_G0028549	Pus1	89	76.000	Mus_spretus
ENSLACG00000018598	PUS1	88	75.211	ENSMPUG00000002314	PUS1	88	75.211	Mustela_putorius_furo
ENSLACG00000018598	PUS1	90	72.222	ENSMLUG00000015790	PUS1	96	73.143	Myotis_lucifugus
ENSLACG00000018598	PUS1	91	74.185	ENSNGAG00000012976	Pus1	82	76.857	Nannospalax_galili
ENSLACG00000018598	PUS1	95	65.879	ENSNBRG00000020502	pus1	96	67.688	Neolamprologus_brichardi
ENSLACG00000018598	PUS1	91	71.390	ENSNLEG00000008505	PUS1	92	79.522	Nomascus_leucogenys
ENSLACG00000018598	PUS1	84	69.027	ENSMEUG00000002825	PUS1	91	69.027	Notamacropus_eugenii
ENSLACG00000018598	PUS1	90	67.500	ENSOPRG00000002701	-	92	67.500	Ochotona_princeps
ENSLACG00000018598	PUS1	91	72.131	ENSODEG00000008248	PUS1	87	77.644	Octodon_degus
ENSLACG00000018598	PUS1	95	65.026	ENSONIG00000003803	pus1	93	67.576	Oreochromis_niloticus
ENSLACG00000018598	PUS1	92	74.797	ENSOANG00000010619	PUS1	89	72.423	Ornithorhynchus_anatinus
ENSLACG00000018598	PUS1	87	75.214	ENSOCUG00000007310	PUS1	81	71.916	Oryctolagus_cuniculus
ENSLACG00000018598	PUS1	94	66.313	ENSORLG00000010787	pus1	86	68.802	Oryzias_latipes
ENSLACG00000018598	PUS1	94	66.844	ENSORLG00020011483	pus1	86	69.359	Oryzias_latipes_hni
ENSLACG00000018598	PUS1	93	67.560	ENSORLG00015023012	pus1	91	69.081	Oryzias_latipes_hsok
ENSLACG00000018598	PUS1	90	67.582	ENSOMEG00000022655	pus1	85	67.397	Oryzias_melastigma
ENSLACG00000018598	PUS1	92	73.854	ENSOGAG00000008720	PUS1	90	76.857	Otolemur_garnettii
ENSLACG00000018598	PUS1	95	71.429	ENSOARG00000013316	PUS1	80	74.930	Ovis_aries
ENSLACG00000018598	PUS1	99	69.042	ENSPPAG00000040971	PUS1	81	79.934	Pan_paniscus
ENSLACG00000018598	PUS1	88	74.648	ENSPPRG00000015456	PUS1	88	74.648	Panthera_pardus
ENSLACG00000018598	PUS1	88	74.432	ENSPTIG00000004201	PUS1	90	74.648	Panthera_tigris_altaica
ENSLACG00000018598	PUS1	99	68.796	ENSPTRG00000005643	PUS1	81	79.538	Pan_troglodytes
ENSLACG00000018598	PUS1	97	70.738	ENSPANG00000000376	PUS1	83	79.208	Papio_anubis
ENSLACG00000018598	PUS1	90	70.248	ENSPKIG00000019369	pus1	83	70.248	Paramormyrops_kingsleyae
ENSLACG00000018598	PUS1	97	74.227	ENSPSIG00000016432	PUS1	90	74.093	Pelodiscus_sinensis
ENSLACG00000018598	PUS1	90	66.391	ENSPMGG00000004522	pus1	93	66.391	Periophthalmus_magnuspinnatus
ENSLACG00000018598	PUS1	91	74.317	ENSPEMG00000013448	Pus1	81	77.391	Peromyscus_maniculatus_bairdii
ENSLACG00000018598	PUS1	82	57.012	ENSPMAG00000004636	pus1	99	57.012	Petromyzon_marinus
ENSLACG00000018598	PUS1	73	70.890	ENSPCIG00000022609	-	70	70.648	Phascolarctos_cinereus
ENSLACG00000018598	PUS1	94	66.491	ENSPFOG00000019669	pus1	86	68.232	Poecilia_formosa
ENSLACG00000018598	PUS1	94	66.491	ENSPLAG00000002692	-	86	68.232	Poecilia_latipinna
ENSLACG00000018598	PUS1	94	66.491	ENSPLAG00000007185	pus1	86	68.232	Poecilia_latipinna
ENSLACG00000018598	PUS1	94	66.491	ENSPMEG00000011115	PUS1	87	68.232	Poecilia_mexicana
ENSLACG00000018598	PUS1	94	66.491	ENSPMEG00000006038	pus1	89	68.232	Poecilia_mexicana
ENSLACG00000018598	PUS1	94	66.755	ENSPREG00000007231	pus1	95	70.294	Poecilia_reticulata
ENSLACG00000018598	PUS1	99	69.000	ENSPPYG00000005132	PUS1	88	72.000	Pongo_abelii
ENSLACG00000018598	PUS1	63	69.412	ENSPCAG00000009110	-	62	69.412	Procavia_capensis
ENSLACG00000018598	PUS1	86	68.300	ENSPCOG00000015595	PUS1	87	67.036	Propithecus_coquereli
ENSLACG00000018598	PUS1	95	65.879	ENSPNYG00000013571	pus1	86	67.680	Pundamilia_nyererei
ENSLACG00000018598	PUS1	97	65.729	ENSPNAG00000003938	pus1	88	66.755	Pygocentrus_nattereri
ENSLACG00000018598	PUS1	92	73.046	ENSRNOG00000037500	Pus1	82	76.000	Rattus_norvegicus
ENSLACG00000018598	PUS1	96	71.318	ENSRBIG00000043177	PUS1	85	79.605	Rhinopithecus_bieti
ENSLACG00000018598	PUS1	96	70.801	ENSRROG00000039744	PUS1	82	78.929	Rhinopithecus_roxellana
ENSLACG00000018598	PUS1	83	30.751	YPL212C	-	75	30.751	Saccharomyces_cerevisiae
ENSLACG00000018598	PUS1	91	72.752	ENSSBOG00000023593	PUS1	86	78.405	Saimiri_boliviensis_boliviensis
ENSLACG00000018598	PUS1	94	73.404	ENSSHAG00000013193	PUS1	87	74.931	Sarcophilus_harrisii
ENSLACG00000018598	PUS1	91	71.858	ENSSFOG00015003463	pus1	83	71.858	Scleropages_formosus
ENSLACG00000018598	PUS1	91	63.760	ENSSMAG00000019075	pus1	88	63.660	Scophthalmus_maximus
ENSLACG00000018598	PUS1	94	64.380	ENSSDUG00000007102	pus1	86	66.298	Seriola_dumerili
ENSLACG00000018598	PUS1	94	64.380	ENSSLDG00000022850	pus1	86	66.298	Seriola_lalandi_dorsalis
ENSLACG00000018598	PUS1	75	67.219	ENSSARG00000008367	PUS1	98	67.219	Sorex_araneus
ENSLACG00000018598	PUS1	95	74.084	ENSSPUG00000010009	PUS1	91	75.616	Sphenodon_punctatus
ENSLACG00000018598	PUS1	96	64.341	ENSSPAG00000006272	pus1	91	66.480	Stegastes_partitus
ENSLACG00000018598	PUS1	96	72.351	ENSSSCG00000009741	PUS1	88	75.556	Sus_scrofa
ENSLACG00000018598	PUS1	82	83.232	ENSTGUG00000008068	PUS1	99	83.232	Taeniopygia_guttata
ENSLACG00000018598	PUS1	89	64.167	ENSTRUG00000002198	pus1	89	66.474	Takifugu_rubripes
ENSLACG00000018598	PUS1	91	63.807	ENSTNIG00000003942	pus1	87	67.347	Tetraodon_nigroviridis
ENSLACG00000018598	PUS1	93	71.658	ENSTTRG00000000632	PUS1	82	74.716	Tursiops_truncatus
ENSLACG00000018598	PUS1	90	74.722	ENSUAMG00000017197	PUS1	89	74.722	Ursus_americanus
ENSLACG00000018598	PUS1	91	73.699	ENSUMAG00000002831	PUS1	96	78.997	Ursus_maritimus
ENSLACG00000018598	PUS1	93	70.130	ENSVVUG00000004199	PUS1	80	74.085	Vulpes_vulpes
ENSLACG00000018598	PUS1	99	68.486	ENSXETG00000002030	pus1	93	71.011	Xenopus_tropicalis
ENSLACG00000018598	PUS1	79	48.903	ENSXETG00000033640	-	99	48.903	Xenopus_tropicalis
ENSLACG00000018598	PUS1	96	66.494	ENSXCOG00000004722	pus1	93	68.508	Xiphophorus_couchianus
ENSLACG00000018598	PUS1	99	64.232	ENSXMAG00000000988	pus1	89	66.053	Xiphophorus_maculatus