EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018604 (Gene tree)
Gene ID: 102363619
Gene Symbol: THUMPD3
Alias: DKFZP434F091
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 19893 bases
Position: chrJH126579.1:3742826-3762718
Accession: 102363619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021177	THUMP	PF02926.17	1.4e-11	1	1
ENSLACP00000021176	THUMP	PF02926.17	1.5e-11	1	1
ENSLACP00000021177	UPF0020	PF01170.18	5.8e-44	1	1
ENSLACP00000021176	UPF0020	PF01170.18	6.4e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021317	THUMPD3-202	1524	-	ENSLACP00000021177	508 (aa)	-	H3BH06
ENSLACT00000021316	THUMPD3-201	5054	XM_005987941	ENSLACP00000021176	535 (aa)	XP_005988003	H3BH05

Gene Model

Click here to download ENSLACG00000018604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018604	THUMPD3	90	62.664	ENSG00000134077	THUMPD3	91	62.896	Homo_sapiens
ENSLACG00000018604	THUMPD3	94	60.334	ENSAPOG00000015836	thumpd3	93	60.797	Acanthochromis_polyacanthus
ENSLACG00000018604	THUMPD3	92	63.368	ENSAMEG00000011321	THUMPD3	92	63.158	Ailuropoda_melanoleuca
ENSLACG00000018604	THUMPD3	92	59.442	ENSACIG00000020096	thumpd3	90	59.448	Amphilophus_citrinellus
ENSLACG00000018604	THUMPD3	90	61.688	ENSAOCG00000004399	thumpd3	88	61.957	Amphiprion_ocellaris
ENSLACG00000018604	THUMPD3	90	62.227	ENSAPEG00000016740	thumpd3	88	61.656	Amphiprion_percula
ENSLACG00000018604	THUMPD3	94	58.144	ENSATEG00000005345	thumpd3	92	60.669	Anabas_testudineus
ENSLACG00000018604	THUMPD3	78	67.830	ENSAPLG00000003598	THUMPD3	99	67.581	Anas_platyrhynchos
ENSLACG00000018604	THUMPD3	92	63.711	ENSACAG00000014974	THUMPD3	93	63.711	Anolis_carolinensis
ENSLACG00000018604	THUMPD3	90	62.664	ENSANAG00000002365	THUMPD3	90	62.664	Aotus_nancymaae
ENSLACG00000018604	THUMPD3	90	60.385	ENSACLG00000023333	thumpd3	88	60.776	Astatotilapia_calliptera
ENSLACG00000018604	THUMPD3	85	40.774	ENSACLG00000013504	-	87	41.002	Astatotilapia_calliptera
ENSLACG00000018604	THUMPD3	92	61.895	ENSAMXG00000015683	thumpd3	95	61.895	Astyanax_mexicanus
ENSLACG00000018604	THUMPD3	99	59.961	ENSBTAG00000003112	THUMPD3	99	60.352	Bos_taurus
ENSLACG00000018604	THUMPD3	87	34.763	WBGene00010846	M04B2.2	64	43.411	Caenorhabditis_elegans
ENSLACG00000018604	THUMPD3	90	62.664	ENSCJAG00000015949	THUMPD3	90	62.664	Callithrix_jacchus
ENSLACG00000018604	THUMPD3	90	63.816	ENSCAFG00000005499	THUMPD3	90	63.816	Canis_familiaris
ENSLACG00000018604	THUMPD3	76	61.440	ENSCAFG00000008060	-	93	61.440	Canis_familiaris
ENSLACG00000018604	THUMPD3	81	62.470	ENSCAFG00020025887	-	94	62.470	Canis_lupus_dingo
ENSLACG00000018604	THUMPD3	90	63.816	ENSCAFG00020008895	-	90	63.816	Canis_lupus_dingo
ENSLACG00000018604	THUMPD3	97	60.516	ENSCHIG00000024037	THUMPD3	97	60.643	Capra_hircus
ENSLACG00000018604	THUMPD3	90	61.572	ENSTSYG00000000159	THUMPD3	90	61.572	Carlito_syrichta
ENSLACG00000018604	THUMPD3	87	40.090	ENSCAPG00000017486	THUMPD3	85	40.312	Cavia_aperea
ENSLACG00000018604	THUMPD3	95	59.756	ENSCPOG00000033287	THUMPD3	95	60.041	Cavia_porcellus
ENSLACG00000018604	THUMPD3	90	58.388	ENSCCAG00000021429	-	92	57.871	Cebus_capucinus
ENSLACG00000018604	THUMPD3	90	62.445	ENSCCAG00000027067	-	90	62.931	Cebus_capucinus
ENSLACG00000018604	THUMPD3	94	60.083	ENSCATG00000040999	THUMPD3	94	60.083	Cercocebus_atys
ENSLACG00000018604	THUMPD3	92	62.025	ENSCLAG00000000690	THUMPD3	92	61.895	Chinchilla_lanigera
ENSLACG00000018604	THUMPD3	94	60.291	ENSCSAG00000010753	THUMPD3	94	60.291	Chlorocebus_sabaeus
ENSLACG00000018604	THUMPD3	55	73.973	ENSCHOG00000012851	THUMPD3	65	73.973	Choloepus_hoffmanni
ENSLACG00000018604	THUMPD3	91	65.890	ENSCPBG00000014771	THUMPD3	93	65.890	Chrysemys_picta_bellii
ENSLACG00000018604	THUMPD3	90	40.919	ENSCSAVG00000008668	-	97	40.700	Ciona_savignyi
ENSLACG00000018604	THUMPD3	94	60.083	ENSCANG00000031901	THUMPD3	94	60.083	Colobus_angolensis_palliatus
ENSLACG00000018604	THUMPD3	92	62.633	ENSCGRG00001024117	Thumpd3	92	62.420	Cricetulus_griseus_chok1gshd
ENSLACG00000018604	THUMPD3	92	62.633	ENSCGRG00000018116	Thumpd3	92	62.420	Cricetulus_griseus_crigri
ENSLACG00000018604	THUMPD3	94	59.205	ENSCSEG00000002546	thumpd3	95	57.938	Cynoglossus_semilaevis
ENSLACG00000018604	THUMPD3	90	62.092	ENSCVAG00000001019	thumpd3	87	62.092	Cyprinodon_variegatus
ENSLACG00000018604	THUMPD3	93	61.099	ENSDARG00000059634	thumpd3	95	61.099	Danio_rerio
ENSLACG00000018604	THUMPD3	90	63.793	ENSDNOG00000047668	THUMPD3	91	60.396	Dasypus_novemcinctus
ENSLACG00000018604	THUMPD3	97	60.000	ENSDORG00000003257	Thumpd3	98	60.040	Dipodomys_ordii
ENSLACG00000018604	THUMPD3	60	58.170	ENSETEG00000020239	-	59	58.170	Echinops_telfairi
ENSLACG00000018604	THUMPD3	87	50.676	ENSEBUG00000004221	thumpd3	95	50.450	Eptatretus_burgeri
ENSLACG00000018604	THUMPD3	97	57.576	ENSEASG00005013327	THUMPD3	97	57.576	Equus_asinus_asinus
ENSLACG00000018604	THUMPD3	93	62.288	ENSECAG00000002016	THUMPD3	93	62.288	Equus_caballus
ENSLACG00000018604	THUMPD3	99	54.386	ENSEEUG00000014696	THUMPD3	99	53.801	Erinaceus_europaeus
ENSLACG00000018604	THUMPD3	82	70.609	ENSELUG00000018246	thumpd3	92	54.845	Esox_lucius
ENSLACG00000018604	THUMPD3	94	61.759	ENSFCAG00000006171	THUMPD3	94	61.350	Felis_catus
ENSLACG00000018604	THUMPD3	82	65.412	ENSFALG00000013631	THUMPD3	88	65.566	Ficedula_albicollis
ENSLACG00000018604	THUMPD3	92	60.797	ENSFDAG00000014825	THUMPD3	92	60.377	Fukomys_damarensis
ENSLACG00000018604	THUMPD3	90	60.475	ENSFHEG00000006006	thumpd3	88	60.345	Fundulus_heteroclitus
ENSLACG00000018604	THUMPD3	91	57.082	ENSGMOG00000007923	thumpd3	90	58.405	Gadus_morhua
ENSLACG00000018604	THUMPD3	93	64.682	ENSGALG00000044813	THUMPD3	98	64.256	Gallus_gallus
ENSLACG00000018604	THUMPD3	98	56.574	ENSGAFG00000021645	thumpd3	95	57.143	Gambusia_affinis
ENSLACG00000018604	THUMPD3	90	60.566	ENSGACG00000000930	thumpd3	93	59.389	Gasterosteus_aculeatus
ENSLACG00000018604	THUMPD3	91	65.254	ENSGAGG00000022750	THUMPD3	93	65.254	Gopherus_agassizii
ENSLACG00000018604	THUMPD3	90	62.882	ENSGGOG00000000604	THUMPD3	89	63.067	Gorilla_gorilla
ENSLACG00000018604	THUMPD3	90	60.600	ENSHBUG00000013405	thumpd3	88	60.776	Haplochromis_burtoni
ENSLACG00000018604	THUMPD3	92	60.638	ENSHGLG00000016200	THUMPD3	92	60.970	Heterocephalus_glaber_female
ENSLACG00000018604	THUMPD3	92	59.298	ENSHGLG00100017321	-	92	61.392	Heterocephalus_glaber_male
ENSLACG00000018604	THUMPD3	89	53.422	ENSHGLG00100000505	-	91	52.863	Heterocephalus_glaber_male
ENSLACG00000018604	THUMPD3	93	58.985	ENSHCOG00000004871	thumpd3	95	58.562	Hippocampus_comes
ENSLACG00000018604	THUMPD3	93	61.392	ENSIPUG00000019415	THUMPD3	91	62.690	Ictalurus_punctatus
ENSLACG00000018604	THUMPD3	99	60.465	ENSSTOG00000003973	THUMPD3	97	61.753	Ictidomys_tridecemlineatus
ENSLACG00000018604	THUMPD3	90	58.531	ENSJJAG00000017751	Thumpd3	91	55.040	Jaculus_jaculus
ENSLACG00000018604	THUMPD3	94	59.959	ENSKMAG00000021025	thumpd3	88	59.836	Kryptolebias_marmoratus
ENSLACG00000018604	THUMPD3	92	59.362	ENSLBEG00000012252	thumpd3	90	60.381	Labrus_bergylta
ENSLACG00000018604	THUMPD3	95	61.462	ENSLOCG00000009800	thumpd3	95	62.786	Lepisosteus_oculatus
ENSLACG00000018604	THUMPD3	92	62.552	ENSLAFG00000005103	THUMPD3	92	62.343	Loxodonta_africana
ENSLACG00000018604	THUMPD3	94	60.291	ENSMFAG00000044884	THUMPD3	94	60.291	Macaca_fascicularis
ENSLACG00000018604	THUMPD3	94	60.291	ENSMMUG00000017307	THUMPD3	94	60.291	Macaca_mulatta
ENSLACG00000018604	THUMPD3	94	60.291	ENSMNEG00000030529	THUMPD3	94	60.291	Macaca_nemestrina
ENSLACG00000018604	THUMPD3	94	60.083	ENSMLEG00000032943	THUMPD3	94	60.083	Mandrillus_leucophaeus
ENSLACG00000018604	THUMPD3	91	60.991	ENSMAMG00000023934	thumpd3	90	60.860	Mastacembelus_armatus
ENSLACG00000018604	THUMPD3	90	60.385	ENSMZEG00005010623	thumpd3	88	60.776	Maylandia_zebra
ENSLACG00000018604	THUMPD3	80	66.995	ENSMGAG00000010182	THUMPD3	99	66.585	Meleagris_gallopavo
ENSLACG00000018604	THUMPD3	92	62.633	ENSMAUG00000012250	Thumpd3	92	62.420	Mesocricetus_auratus
ENSLACG00000018604	THUMPD3	96	57.171	ENSMICG00000010095	THUMPD3	95	57.059	Microcebus_murinus
ENSLACG00000018604	THUMPD3	92	61.996	ENSMOCG00000020148	Thumpd3	92	61.783	Microtus_ochrogaster
ENSLACG00000018604	THUMPD3	91	60.173	ENSMMOG00000021791	thumpd3	93	60.043	Mola_mola
ENSLACG00000018604	THUMPD3	95	61.711	ENSMODG00000004715	-	95	61.475	Monodelphis_domestica
ENSLACG00000018604	THUMPD3	90	61.707	ENSMALG00000017316	thumpd3	92	61.050	Monopterus_albus
ENSLACG00000018604	THUMPD3	57	56.610	MGP_CAROLIEiJ_G0028714	-	60	56.271	Mus_caroli
ENSLACG00000018604	THUMPD3	90	63.617	ENSMUSG00000030264	Thumpd3	89	63.399	Mus_musculus
ENSLACG00000018604	THUMPD3	90	64.208	MGP_PahariEiJ_G0022465	Thumpd3	94	61.777	Mus_pahari
ENSLACG00000018604	THUMPD3	90	63.617	MGP_SPRETEiJ_G0029742	Thumpd3	89	63.399	Mus_spretus
ENSLACG00000018604	THUMPD3	93	56.250	ENSMPUG00000005219	-	93	56.604	Mustela_putorius_furo
ENSLACG00000018604	THUMPD3	93	63.080	ENSMPUG00000017066	-	93	63.257	Mustela_putorius_furo
ENSLACG00000018604	THUMPD3	97	58.730	ENSMLUG00000008538	THUMPD3	96	59.163	Myotis_lucifugus
ENSLACG00000018604	THUMPD3	97	49.899	ENSNGAG00000001549	-	97	49.899	Nannospalax_galili
ENSLACG00000018604	THUMPD3	90	64.224	ENSNGAG00000021014	-	90	64.224	Nannospalax_galili
ENSLACG00000018604	THUMPD3	90	60.171	ENSNBRG00000004886	thumpd3	88	60.430	Neolamprologus_brichardi
ENSLACG00000018604	THUMPD3	94	60.499	ENSNLEG00000003863	THUMPD3	90	62.664	Nomascus_leucogenys
ENSLACG00000018604	THUMPD3	81	63.017	ENSMEUG00000009819	THUMPD3	96	63.017	Notamacropus_eugenii
ENSLACG00000018604	THUMPD3	81	61.408	ENSOPRG00000002020	THUMPD3	96	61.374	Ochotona_princeps
ENSLACG00000018604	THUMPD3	71	59.836	ENSODEG00000018242	THUMPD3	100	58.791	Octodon_degus
ENSLACG00000018604	THUMPD3	90	60.691	ENSONIG00000018977	thumpd3	88	60.560	Oreochromis_niloticus
ENSLACG00000018604	THUMPD3	81	59.420	ENSOANG00000014481	THUMPD3	96	59.036	Ornithorhynchus_anatinus
ENSLACG00000018604	THUMPD3	92	62.900	ENSOCUG00000010921	THUMPD3	91	62.900	Oryctolagus_cuniculus
ENSLACG00000018604	THUMPD3	94	59.044	ENSORLG00000000676	thumpd3	90	60.521	Oryzias_latipes
ENSLACG00000018604	THUMPD3	90	61.656	ENSORLG00020007509	thumpd3	90	61.171	Oryzias_latipes_hni
ENSLACG00000018604	THUMPD3	94	59.459	ENSORLG00015003615	thumpd3	90	60.954	Oryzias_latipes_hsok
ENSLACG00000018604	THUMPD3	90	59.389	ENSOMEG00000014115	thumpd3	89	59.170	Oryzias_melastigma
ENSLACG00000018604	THUMPD3	81	60.732	ENSOGAG00000017111	THUMPD3	98	60.732	Otolemur_garnettii
ENSLACG00000018604	THUMPD3	97	60.516	ENSOARG00000007139	THUMPD3	95	60.643	Ovis_aries
ENSLACG00000018604	THUMPD3	90	62.664	ENSPPAG00000025852	THUMPD3	89	62.664	Pan_paniscus
ENSLACG00000018604	THUMPD3	93	63.223	ENSPPRG00000008071	THUMPD3	92	62.810	Panthera_pardus
ENSLACG00000018604	THUMPD3	93	63.466	ENSPTIG00000017923	THUMPD3	93	63.466	Panthera_tigris_altaica
ENSLACG00000018604	THUMPD3	90	62.445	ENSPTRG00000014585	THUMPD3	89	62.445	Pan_troglodytes
ENSLACG00000018604	THUMPD3	94	60.083	ENSPANG00000016253	THUMPD3	94	60.083	Papio_anubis
ENSLACG00000018604	THUMPD3	90	62.664	ENSPKIG00000014009	thumpd3	91	62.445	Paramormyrops_kingsleyae
ENSLACG00000018604	THUMPD3	91	64.756	ENSPSIG00000007370	THUMPD3	93	63.694	Pelodiscus_sinensis
ENSLACG00000018604	THUMPD3	90	60.480	ENSPMGG00000017563	thumpd3	91	60.349	Periophthalmus_magnuspinnatus
ENSLACG00000018604	THUMPD3	92	61.996	ENSPEMG00000022411	Thumpd3	92	61.783	Peromyscus_maniculatus_bairdii
ENSLACG00000018604	THUMPD3	90	55.085	ENSPMAG00000001291	thumpd3	100	53.205	Petromyzon_marinus
ENSLACG00000018604	THUMPD3	96	60.612	ENSPCIG00000002049	THUMPD3	94	60.408	Phascolarctos_cinereus
ENSLACG00000018604	THUMPD3	95	58.969	ENSPFOG00000002318	thumpd3	92	59.044	Poecilia_formosa
ENSLACG00000018604	THUMPD3	95	58.969	ENSPLAG00000014804	thumpd3	92	59.044	Poecilia_latipinna
ENSLACG00000018604	THUMPD3	95	58.969	ENSPMEG00000000582	thumpd3	92	59.044	Poecilia_mexicana
ENSLACG00000018604	THUMPD3	95	58.848	ENSPREG00000009176	thumpd3	93	59.006	Poecilia_reticulata
ENSLACG00000018604	THUMPD3	90	62.445	ENSPPYG00000029461	THUMPD3	90	62.445	Pongo_abelii
ENSLACG00000018604	THUMPD3	90	45.934	ENSPPYG00000017616	-	90	45.770	Pongo_abelii
ENSLACG00000018604	THUMPD3	83	59.368	ENSPCAG00000015398	THUMPD3	99	60.047	Procavia_capensis
ENSLACG00000018604	THUMPD3	80	57.494	ENSPCOG00000023618	-	92	57.494	Propithecus_coquereli
ENSLACG00000018604	THUMPD3	93	52.442	ENSPCOG00000018095	-	92	53.928	Propithecus_coquereli
ENSLACG00000018604	THUMPD3	97	59.295	ENSPVAG00000008721	THUMPD3	97	59.208	Pteropus_vampyrus
ENSLACG00000018604	THUMPD3	90	60.385	ENSPNYG00000006918	thumpd3	88	60.776	Pundamilia_nyererei
ENSLACG00000018604	THUMPD3	90	61.978	ENSPNAG00000014936	thumpd3	90	62.582	Pygocentrus_nattereri
ENSLACG00000018604	THUMPD3	92	62.025	ENSRNOG00000006941	Thumpd3	92	61.653	Rattus_norvegicus
ENSLACG00000018604	THUMPD3	94	60.291	ENSRBIG00000035954	THUMPD3	95	60.291	Rhinopithecus_bieti
ENSLACG00000018604	THUMPD3	94	60.291	ENSRROG00000035734	THUMPD3	95	60.291	Rhinopithecus_roxellana
ENSLACG00000018604	THUMPD3	90	62.801	ENSSBOG00000023567	THUMPD3	92	63.596	Saimiri_boliviensis_boliviensis
ENSLACG00000018604	THUMPD3	90	63.341	ENSSHAG00000014467	THUMPD3	90	63.341	Sarcophilus_harrisii
ENSLACG00000018604	THUMPD3	96	58.954	ENSSFOG00015019210	thumpd3	97	58.704	Scleropages_formosus
ENSLACG00000018604	THUMPD3	93	57.916	ENSSMAG00000000609	thumpd3	92	61.039	Scophthalmus_maximus
ENSLACG00000018604	THUMPD3	90	62.473	ENSSDUG00000012179	thumpd3	91	62.039	Seriola_dumerili
ENSLACG00000018604	THUMPD3	90	62.609	ENSSLDG00000022028	thumpd3	89	62.039	Seriola_lalandi_dorsalis
ENSLACG00000018604	THUMPD3	80	70.886	ENSSARG00000002239	THUMPD3	80	70.886	Sorex_araneus
ENSLACG00000018604	THUMPD3	97	61.811	ENSSPUG00000017461	THUMPD3	99	61.386	Sphenodon_punctatus
ENSLACG00000018604	THUMPD3	96	59.343	ENSSPAG00000008345	thumpd3	92	59.426	Stegastes_partitus
ENSLACG00000018604	THUMPD3	94	61.746	ENSSSCG00000011542	THUMPD3	95	61.538	Sus_scrofa
ENSLACG00000018604	THUMPD3	89	65.563	ENSTGUG00000010440	THUMPD3	100	65.563	Taeniopygia_guttata
ENSLACG00000018604	THUMPD3	90	53.377	ENSTRUG00000004420	thumpd3	90	52.838	Takifugu_rubripes
ENSLACG00000018604	THUMPD3	90	59.170	ENSTNIG00000014627	thumpd3	94	58.515	Tetraodon_nigroviridis
ENSLACG00000018604	THUMPD3	99	54.331	ENSTBEG00000003450	THUMPD3	96	55.466	Tupaia_belangeri
ENSLACG00000018604	THUMPD3	90	62.931	ENSTTRG00000009694	THUMPD3	89	63.158	Tursiops_truncatus
ENSLACG00000018604	THUMPD3	97	60.878	ENSUAMG00000009412	THUMPD3	97	60.679	Ursus_americanus
ENSLACG00000018604	THUMPD3	97	59.798	ENSUMAG00000019241	THUMPD3	87	76.923	Ursus_maritimus
ENSLACG00000018604	THUMPD3	83	57.109	ENSVPAG00000002855	THUMPD3	100	56.872	Vicugna_pacos
ENSLACG00000018604	THUMPD3	90	63.596	ENSVVUG00000025278	THUMPD3	90	63.596	Vulpes_vulpes
ENSLACG00000018604	THUMPD3	96	58.621	ENSXETG00000001447	thumpd3	96	58.215	Xenopus_tropicalis
ENSLACG00000018604	THUMPD3	98	57.685	ENSXCOG00000000159	thumpd3	95	58.266	Xiphophorus_couchianus
ENSLACG00000018604	THUMPD3	98	57.685	ENSXMAG00000001423	thumpd3	95	58.266	Xiphophorus_maculatus