EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018622 (Gene tree)
Gene ID: 102351627
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2909 bases
Position: chrJH126569.1:3816227-3819135
Accession: 102351627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021198	Ribosomal_L29e	PF01779.17	1.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021338	-	195	-	ENSLACP00000021198	64 (aa)	XP_014341091	H3BH27

Gene Model

Click here to download ENSLACG00000018622's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018622	rpl29	100	100.000	ENSLACG00000018031	-	94	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018622	rpl29	98	64.865	ENSG00000162244	RPL29	97	83.333	Homo_sapiens
ENSLACG00000018622	rpl29	84	85.185	ENSAPOG00000002586	rpl29	97	82.258	Acanthochromis_polyacanthus
ENSLACG00000018622	rpl29	84	88.889	ENSACIG00000018340	rpl29	95	86.885	Amphilophus_citrinellus
ENSLACG00000018622	rpl29	84	88.889	ENSAOCG00000016652	rpl29	97	85.484	Amphiprion_ocellaris
ENSLACG00000018622	rpl29	84	88.889	ENSAPEG00000005754	rpl29	97	85.484	Amphiprion_percula
ENSLACG00000018622	rpl29	72	91.304	ENSACAG00000006888	RPL29	89	87.931	Anolis_carolinensis
ENSLACG00000018622	rpl29	98	64.865	ENSANAG00000024147	-	77	73.913	Aotus_nancymaae
ENSLACG00000018622	rpl29	95	86.885	ENSACLG00000017820	rpl29	95	86.885	Astatotilapia_calliptera
ENSLACG00000018622	rpl29	88	89.286	ENSAMXG00000038794	rpl29	88	89.286	Astyanax_mexicanus
ENSLACG00000018622	rpl29	84	59.259	WBGene00004443	rpl-29	87	59.259	Caenorhabditis_elegans
ENSLACG00000018622	rpl29	98	64.865	ENSCJAG00000042339	-	77	73.913	Callithrix_jacchus
ENSLACG00000018622	rpl29	98	64.865	ENSCCAG00000027980	-	58	88.571	Cebus_capucinus
ENSLACG00000018622	rpl29	72	80.851	ENSCSAG00000017871	-	50	82.143	Chlorocebus_sabaeus
ENSLACG00000018622	rpl29	81	73.077	ENSCING00000018496	-	90	73.077	Ciona_intestinalis
ENSLACG00000018622	rpl29	83	73.585	ENSCSAVG00000005231	-	90	73.585	Ciona_savignyi
ENSLACG00000018622	rpl29	72	91.304	ENSCGRG00001016452	-	81	90.909	Cricetulus_griseus_chok1gshd
ENSLACG00000018622	rpl29	78	90.000	ENSCSEG00000010267	rpl29	97	85.938	Cynoglossus_semilaevis
ENSLACG00000018622	rpl29	78	92.000	ENSCVAG00000023098	rpl29	95	88.525	Cyprinodon_variegatus
ENSLACG00000018622	rpl29	97	82.812	ENSDARG00000077717	rpl29	100	82.812	Danio_rerio
ENSLACG00000018622	rpl29	78	68.000	FBgn0016726	RpL29	66	68.000	Drosophila_melanogaster
ENSLACG00000018622	rpl29	67	81.395	ENSEASG00005005507	-	66	81.395	Equus_asinus_asinus
ENSLACG00000018622	rpl29	97	77.419	ENSELUG00000015592	RL29	89	77.419	Esox_lucius
ENSLACG00000018622	rpl29	67	69.767	ENSFCAG00000035470	-	58	68.182	Felis_catus
ENSLACG00000018622	rpl29	81	69.231	ENSFCAG00000043006	-	64	69.231	Felis_catus
ENSLACG00000018622	rpl29	72	93.478	ENSFALG00000008925	RPL29	81	92.727	Ficedula_albicollis
ENSLACG00000018622	rpl29	95	90.164	ENSFHEG00000015425	rpl29	95	90.164	Fundulus_heteroclitus
ENSLACG00000018622	rpl29	84	85.185	ENSGMOG00000003626	rpl29	80	83.607	Gadus_morhua
ENSLACG00000018622	rpl29	72	91.304	ENSGALG00000026978	RPL29	77	90.909	Gallus_gallus
ENSLACG00000018622	rpl29	95	88.525	ENSGAFG00000012868	rpl29	95	88.525	Gambusia_affinis
ENSLACG00000018622	rpl29	98	80.952	ENSGACG00000007041	rpl29	82	80.952	Gasterosteus_aculeatus
ENSLACG00000018622	rpl29	67	74.419	ENSGAGG00000024203	-	80	74.419	Gopherus_agassizii
ENSLACG00000018622	rpl29	98	64.865	ENSGGOG00000024691	RPL29	62	83.784	Gorilla_gorilla
ENSLACG00000018622	rpl29	95	86.885	ENSHBUG00000010519	rpl29	95	86.885	Haplochromis_burtoni
ENSLACG00000018622	rpl29	78	90.000	ENSHCOG00000000478	rpl29	78	86.885	Hippocampus_comes
ENSLACG00000018622	rpl29	97	81.250	ENSIPUG00000001196	rpl29	100	81.250	Ictalurus_punctatus
ENSLACG00000018622	rpl29	84	90.741	ENSKMAG00000011291	rpl29	95	88.525	Kryptolebias_marmoratus
ENSLACG00000018622	rpl29	84	88.889	ENSLBEG00000016213	rpl29	94	81.250	Labrus_bergylta
ENSLACG00000018622	rpl29	72	89.130	ENSLOCG00000013798	rpl29	85	89.091	Lepisosteus_oculatus
ENSLACG00000018622	rpl29	84	90.741	ENSMAMG00000014274	rpl29	66	84.127	Mastacembelus_armatus
ENSLACG00000018622	rpl29	95	86.885	ENSMZEG00005013519	rpl29	95	86.885	Maylandia_zebra
ENSLACG00000018622	rpl29	72	91.304	ENSMGAG00000001213	RPL29	77	90.909	Meleagris_gallopavo
ENSLACG00000018622	rpl29	98	69.444	ENSMICG00000044913	-	53	69.444	Microcebus_murinus
ENSLACG00000018622	rpl29	77	77.551	ENSMICG00000049466	-	74	77.551	Microcebus_murinus
ENSLACG00000018622	rpl29	97	83.871	ENSMMOG00000010430	rpl29	97	83.871	Mola_mola
ENSLACG00000018622	rpl29	84	90.741	ENSMALG00000009023	rpl29	82	82.812	Monopterus_albus
ENSLACG00000018622	rpl29	72	91.304	ENSMUSG00000048758	Rpl29	81	90.909	Mus_musculus
ENSLACG00000018622	rpl29	95	86.885	ENSNBRG00000022109	rpl29	95	86.885	Neolamprologus_brichardi
ENSLACG00000018622	rpl29	95	86.885	ENSONIG00000014377	rpl29	97	86.885	Oreochromis_niloticus
ENSLACG00000018622	rpl29	97	87.097	ENSORLG00000023610	rpl29	65	87.097	Oryzias_latipes
ENSLACG00000018622	rpl29	97	87.097	ENSORLG00020018665	rpl29	65	87.097	Oryzias_latipes_hni
ENSLACG00000018622	rpl29	97	87.097	ENSORLG00015014455	rpl29	65	87.097	Oryzias_latipes_hsok
ENSLACG00000018622	rpl29	97	85.484	ENSOMEG00000019919	rpl29	97	85.484	Oryzias_melastigma
ENSLACG00000018622	rpl29	56	86.111	ENSPPAG00000037142	-	61	86.111	Pan_paniscus
ENSLACG00000018622	rpl29	81	71.154	ENSPPRG00000011689	-	80	71.154	Panthera_pardus
ENSLACG00000018622	rpl29	81	69.231	ENSPTIG00000011913	-	63	69.231	Panthera_tigris_altaica
ENSLACG00000018622	rpl29	98	64.865	ENSPTRG00000043237	RPL29	61	86.111	Pan_troglodytes
ENSLACG00000018622	rpl29	72	89.130	ENSPKIG00000025048	rpl29	91	85.000	Paramormyrops_kingsleyae
ENSLACG00000018622	rpl29	72	91.304	ENSPSIG00000014699	RPL29	92	87.931	Pelodiscus_sinensis
ENSLACG00000018622	rpl29	94	86.667	ENSPMGG00000005361	rpl29	88	86.667	Periophthalmus_magnuspinnatus
ENSLACG00000018622	rpl29	95	88.525	ENSPFOG00000011385	rpl29	100	88.525	Poecilia_formosa
ENSLACG00000018622	rpl29	78	90.000	ENSPLAG00000012042	rpl29	95	86.885	Poecilia_latipinna
ENSLACG00000018622	rpl29	78	92.000	ENSPMEG00000018297	rpl29	95	88.525	Poecilia_mexicana
ENSLACG00000018622	rpl29	78	92.000	ENSPREG00000007066	rpl29	95	88.525	Poecilia_reticulata
ENSLACG00000018622	rpl29	95	86.885	ENSPNYG00000019481	rpl29	95	86.885	Pundamilia_nyererei
ENSLACG00000018622	rpl29	97	82.812	ENSPNAG00000007550	rpl29	100	82.812	Pygocentrus_nattereri
ENSLACG00000018622	rpl29	95	73.016	ENSRNOG00000025794	AABR07021239.1	84	73.016	Rattus_norvegicus
ENSLACG00000018622	rpl29	72	73.913	YFR032C-A	RPL29	100	62.712	Saccharomyces_cerevisiae
ENSLACG00000018622	rpl29	84	88.889	ENSSMAG00000013571	rpl29	95	85.246	Scophthalmus_maximus
ENSLACG00000018622	rpl29	78	90.000	ENSSDUG00000016140	rpl29	97	83.871	Seriola_dumerili
ENSLACG00000018622	rpl29	72	59.574	ENSSDUG00000020458	-	76	59.574	Seriola_dumerili
ENSLACG00000018622	rpl29	78	90.000	ENSSLDG00000003932	rpl29	97	83.871	Seriola_lalandi_dorsalis
ENSLACG00000018622	rpl29	72	91.304	ENSSPUG00000003760	RPL29	92	87.931	Sphenodon_punctatus
ENSLACG00000018622	rpl29	84	81.481	ENSSPAG00000020292	rpl29	100	75.000	Stegastes_partitus
ENSLACG00000018622	rpl29	84	62.963	ENSSSCG00000031314	-	85	62.963	Sus_scrofa
ENSLACG00000018622	rpl29	59	84.211	ENSSSCG00000037047	-	96	85.106	Sus_scrofa
ENSLACG00000018622	rpl29	72	93.478	ENSTGUG00000006027	RPL29	87	92.727	Taeniopygia_guttata
ENSLACG00000018622	rpl29	95	83.607	ENSTRUG00000022273	rpl29	94	83.607	Takifugu_rubripes
ENSLACG00000018622	rpl29	83	86.792	ENSTNIG00000014816	rpl29	91	82.258	Tetraodon_nigroviridis
ENSLACG00000018622	rpl29	95	70.492	ENSTBEG00000000807	-	74	70.492	Tupaia_belangeri
ENSLACG00000018622	rpl29	83	78.947	ENSUAMG00000002601	-	100	78.947	Ursus_americanus
ENSLACG00000018622	rpl29	72	86.957	ENSVVUG00000012400	-	96	87.273	Vulpes_vulpes
ENSLACG00000018622	rpl29	72	91.304	ENSXETG00000010811	rpl29	73	90.909	Xenopus_tropicalis
ENSLACG00000018622	rpl29	95	88.525	ENSXCOG00000013543	rpl29	95	88.525	Xiphophorus_couchianus
ENSLACG00000018622	rpl29	95	88.525	ENSXMAG00000020948	rpl29	95	88.525	Xiphophorus_maculatus