EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018678 (Gene tree)
Gene ID: -
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 102524 bases
Position: chrJH126570.1:4023902-4126425
Accession: 10790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021257	DRY_EERY	PF09750.9	3e-32	1	1
ENSLACP00000021257	Surp	PF01805.20	3.6e-27	1	2
ENSLACP00000021257	Surp	PF01805.20	3.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021398	SFSWAP-201	5394	-	ENSLACP00000021257	953 (aa)	-	H3BH86

Gene Model

Click here to download ENSLACG00000018678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018678's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018678	SFSWAP	96	65.702	ENSG00000061936	SFSWAP	96	70.103	Homo_sapiens
ENSLACG00000018678	SFSWAP	71	57.389	ENSAPOG00000005784	sfswap	68	82.927	Acanthochromis_polyacanthus
ENSLACG00000018678	SFSWAP	96	64.655	ENSAMEG00000013818	SFSWAP	100	63.109	Ailuropoda_melanoleuca
ENSLACG00000018678	SFSWAP	71	56.028	ENSAOCG00000016469	sfswap	68	58.429	Amphiprion_ocellaris
ENSLACG00000018678	SFSWAP	71	56.028	ENSAPEG00000004965	sfswap	68	58.571	Amphiprion_percula
ENSLACG00000018678	SFSWAP	75	56.434	ENSATEG00000021053	sfswap	77	82.927	Anabas_testudineus
ENSLACG00000018678	SFSWAP	97	65.360	ENSAPLG00000013808	SFSWAP	98	65.466	Anas_platyrhynchos
ENSLACG00000018678	SFSWAP	93	62.362	ENSACAG00000007220	SFSWAP	100	61.810	Anolis_carolinensis
ENSLACG00000018678	SFSWAP	96	64.920	ENSANAG00000001518	SFSWAP	100	63.272	Aotus_nancymaae
ENSLACG00000018678	SFSWAP	69	59.455	ENSACLG00000020159	sfswap	70	60.292	Astatotilapia_calliptera
ENSLACG00000018678	SFSWAP	72	57.916	ENSAMXG00000008657	sfswap	72	57.182	Astyanax_mexicanus
ENSLACG00000018678	SFSWAP	96	64.133	ENSBTAG00000000439	SFSWAP	100	63.440	Bos_taurus
ENSLACG00000018678	SFSWAP	96	64.485	ENSCJAG00000003613	SFSWAP	100	63.440	Callithrix_jacchus
ENSLACG00000018678	SFSWAP	96	65.521	ENSCAFG00000006625	SFSWAP	100	63.946	Canis_familiaris
ENSLACG00000018678	SFSWAP	86	59.806	ENSCAFG00020011254	SFSWAP	99	59.683	Canis_lupus_dingo
ENSLACG00000018678	SFSWAP	96	64.599	ENSCHIG00000008838	SFSWAP	100	63.169	Capra_hircus
ENSLACG00000018678	SFSWAP	100	63.983	ENSCCAG00000037255	SFSWAP	100	64.573	Cebus_capucinus
ENSLACG00000018678	SFSWAP	96	65.809	ENSCATG00000031094	SFSWAP	100	64.330	Cercocebus_atys
ENSLACG00000018678	SFSWAP	96	66.489	ENSCLAG00000008380	SFSWAP	100	64.882	Chinchilla_lanigera
ENSLACG00000018678	SFSWAP	96	65.702	ENSCSAG00000001884	SFSWAP	100	64.330	Chlorocebus_sabaeus
ENSLACG00000018678	SFSWAP	92	58.737	ENSCHOG00000003578	SFSWAP	93	67.117	Choloepus_hoffmanni
ENSLACG00000018678	SFSWAP	96	63.845	ENSCPBG00000024757	SFSWAP	99	61.895	Chrysemys_picta_bellii
ENSLACG00000018678	SFSWAP	96	65.809	ENSCANG00000036501	SFSWAP	100	64.433	Colobus_angolensis_palliatus
ENSLACG00000018678	SFSWAP	98	63.816	ENSCGRG00001011284	Sfswap	100	65.329	Cricetulus_griseus_chok1gshd
ENSLACG00000018678	SFSWAP	98	63.816	ENSCGRG00000017417	Sfswap	100	65.329	Cricetulus_griseus_crigri
ENSLACG00000018678	SFSWAP	69	59.357	ENSCSEG00000003773	sfswap	68	57.849	Cynoglossus_semilaevis
ENSLACG00000018678	SFSWAP	96	53.996	ENSDARG00000005980	sfswap	71	57.939	Danio_rerio
ENSLACG00000018678	SFSWAP	96	62.041	ENSDNOG00000018742	SFSWAP	100	62.880	Dasypus_novemcinctus
ENSLACG00000018678	SFSWAP	96	58.861	ENSDORG00000010352	Sfswap	99	59.638	Dipodomys_ordii
ENSLACG00000018678	SFSWAP	60	38.701	FBgn0003638	su(w[a])	83	47.761	Drosophila_melanogaster
ENSLACG00000018678	SFSWAP	76	77.586	ENSETEG00000016657	-	75	78.571	Echinops_telfairi
ENSLACG00000018678	SFSWAP	84	34.759	ENSEBUG00000016748	SFSWAP	89	38.018	Eptatretus_burgeri
ENSLACG00000018678	SFSWAP	100	63.430	ENSEASG00005016502	SFSWAP	100	63.608	Equus_asinus_asinus
ENSLACG00000018678	SFSWAP	98	62.830	ENSECAG00000007657	SFSWAP	99	63.014	Equus_caballus
ENSLACG00000018678	SFSWAP	86	57.470	ENSEEUG00000001713	SFSWAP	99	56.197	Erinaceus_europaeus
ENSLACG00000018678	SFSWAP	96	50.895	ENSELUG00000010942	sfswap	97	49.851	Esox_lucius
ENSLACG00000018678	SFSWAP	96	64.530	ENSFCAG00000010778	SFSWAP	100	62.951	Felis_catus
ENSLACG00000018678	SFSWAP	96	63.097	ENSFALG00000009577	SFSWAP	96	64.831	Ficedula_albicollis
ENSLACG00000018678	SFSWAP	96	65.139	ENSFDAG00000017235	SFSWAP	100	63.897	Fukomys_damarensis
ENSLACG00000018678	SFSWAP	71	56.960	ENSGAFG00000006272	sfswap	72	58.865	Gambusia_affinis
ENSLACG00000018678	SFSWAP	78	66.667	ENSGACG00000017647	sfswap	88	77.273	Gasterosteus_aculeatus
ENSLACG00000018678	SFSWAP	96	62.998	ENSGAGG00000002611	SFSWAP	99	61.881	Gopherus_agassizii
ENSLACG00000018678	SFSWAP	96	65.418	ENSGGOG00000014877	SFSWAP	100	64.021	Gorilla_gorilla
ENSLACG00000018678	SFSWAP	69	59.004	ENSHBUG00000005629	sfswap	69	60.584	Haplochromis_burtoni
ENSLACG00000018678	SFSWAP	75	54.021	ENSHCOG00000009475	sfswap	68	56.268	Hippocampus_comes
ENSLACG00000018678	SFSWAP	70	59.551	ENSIPUG00000010598	sfswap	98	52.415	Ictalurus_punctatus
ENSLACG00000018678	SFSWAP	96	65.091	ENSSTOG00000000773	SFSWAP	100	63.814	Ictidomys_tridecemlineatus
ENSLACG00000018678	SFSWAP	96	65.129	ENSJJAG00000006609	Sfswap	100	63.440	Jaculus_jaculus
ENSLACG00000018678	SFSWAP	71	56.250	ENSKMAG00000013168	sfswap	68	57.082	Kryptolebias_marmoratus
ENSLACG00000018678	SFSWAP	71	55.712	ENSLBEG00000010239	sfswap	74	55.807	Labrus_bergylta
ENSLACG00000018678	SFSWAP	94	64.803	ENSMFAG00000037352	SFSWAP	100	59.961	Macaca_fascicularis
ENSLACG00000018678	SFSWAP	96	65.702	ENSMMUG00000020343	SFSWAP	100	64.330	Macaca_mulatta
ENSLACG00000018678	SFSWAP	96	65.702	ENSMNEG00000041002	SFSWAP	100	64.330	Macaca_nemestrina
ENSLACG00000018678	SFSWAP	96	64.202	ENSMLEG00000035728	SFSWAP	100	62.680	Mandrillus_leucophaeus
ENSLACG00000018678	SFSWAP	75	54.894	ENSMAMG00000006631	sfswap	68	57.310	Mastacembelus_armatus
ENSLACG00000018678	SFSWAP	69	58.712	ENSMZEG00005017834	SFSWAP	67	60.292	Maylandia_zebra
ENSLACG00000018678	SFSWAP	96	65.628	ENSMOCG00000014390	Sfswap	100	65.567	Microtus_ochrogaster
ENSLACG00000018678	SFSWAP	96	59.549	ENSMODG00000015581	SFSWAP	95	57.518	Monodelphis_domestica
ENSLACG00000018678	SFSWAP	75	56.428	ENSMALG00000012603	sfswap	90	56.790	Monopterus_albus
ENSLACG00000018678	SFSWAP	96	65.310	MGP_CAROLIEiJ_G0027780	Sfswap	100	65.123	Mus_caroli
ENSLACG00000018678	SFSWAP	96	64.876	ENSMUSG00000029439	Sfswap	100	65.021	Mus_musculus
ENSLACG00000018678	SFSWAP	96	64.769	MGP_PahariEiJ_G0024360	Sfswap	100	64.499	Mus_pahari
ENSLACG00000018678	SFSWAP	96	64.984	MGP_SPRETEiJ_G0028779	Sfswap	100	65.123	Mus_spretus
ENSLACG00000018678	SFSWAP	96	63.919	ENSMPUG00000002218	SFSWAP	100	62.513	Mustela_putorius_furo
ENSLACG00000018678	SFSWAP	85	61.213	ENSMLUG00000011296	SFSWAP	83	63.926	Myotis_lucifugus
ENSLACG00000018678	SFSWAP	100	63.872	ENSNGAG00000018167	Sfswap	100	63.918	Nannospalax_galili
ENSLACG00000018678	SFSWAP	66	56.947	ENSNBRG00000020857	sfswap	67	58.706	Neolamprologus_brichardi
ENSLACG00000018678	SFSWAP	96	62.058	ENSNLEG00000008386	SFSWAP	100	62.474	Nomascus_leucogenys
ENSLACG00000018678	SFSWAP	70	64.029	ENSMEUG00000009556	-	78	64.029	Notamacropus_eugenii
ENSLACG00000018678	SFSWAP	83	62.621	ENSOPRG00000006983	-	92	65.859	Ochotona_princeps
ENSLACG00000018678	SFSWAP	87	60.260	ENSONIG00000003757	sfswap	74	70.588	Oreochromis_niloticus
ENSLACG00000018678	SFSWAP	71	56.863	ENSORLG00000010983	sfswap	71	56.643	Oryzias_latipes
ENSLACG00000018678	SFSWAP	71	56.863	ENSORLG00020010779	sfswap	71	55.899	Oryzias_latipes_hni
ENSLACG00000018678	SFSWAP	71	56.942	ENSORLG00015023093	sfswap	71	55.775	Oryzias_latipes_hsok
ENSLACG00000018678	SFSWAP	71	57.345	ENSOMEG00000022065	sfswap	70	56.962	Oryzias_melastigma
ENSLACG00000018678	SFSWAP	96	64.637	ENSOARG00000014314	SFSWAP	100	62.384	Ovis_aries
ENSLACG00000018678	SFSWAP	96	65.595	ENSPPAG00000036706	SFSWAP	100	63.918	Pan_paniscus
ENSLACG00000018678	SFSWAP	96	59.858	ENSPPRG00000017318	SFSWAP	74	62.467	Panthera_pardus
ENSLACG00000018678	SFSWAP	95	59.344	ENSPTIG00000004304	SFSWAP	99	56.771	Panthera_tigris_altaica
ENSLACG00000018678	SFSWAP	96	65.380	ENSPTRG00000005640	SFSWAP	100	63.711	Pan_troglodytes
ENSLACG00000018678	SFSWAP	96	65.809	ENSPANG00000019737	SFSWAP	100	64.330	Papio_anubis
ENSLACG00000018678	SFSWAP	70	58.916	ENSPKIG00000008327	sfswap	72	59.490	Paramormyrops_kingsleyae
ENSLACG00000018678	SFSWAP	61	55.643	ENSPSIG00000017807	SFSWAP	59	64.690	Pelodiscus_sinensis
ENSLACG00000018678	SFSWAP	100	64.161	ENSPEMG00000001237	Sfswap	100	62.795	Peromyscus_maniculatus_bairdii
ENSLACG00000018678	SFSWAP	96	62.999	ENSPCIG00000006062	SFSWAP	95	62.142	Phascolarctos_cinereus
ENSLACG00000018678	SFSWAP	71	58.537	ENSPFOG00000019657	sfswap	70	59.629	Poecilia_formosa
ENSLACG00000018678	SFSWAP	71	58.680	ENSPLAG00000008513	sfswap	70	59.772	Poecilia_latipinna
ENSLACG00000018678	SFSWAP	71	58.537	ENSPMEG00000008716	sfswap	71	59.629	Poecilia_mexicana
ENSLACG00000018678	SFSWAP	71	57.835	ENSPREG00000006692	sfswap	70	59.344	Poecilia_reticulata
ENSLACG00000018678	SFSWAP	94	65.137	ENSPPYG00000005129	SFSWAP	100	63.589	Pongo_abelii
ENSLACG00000018678	SFSWAP	50	70.309	ENSPCAG00000004977	-	61	68.582	Procavia_capensis
ENSLACG00000018678	SFSWAP	88	62.637	ENSPVAG00000014918	SFSWAP	92	63.167	Pteropus_vampyrus
ENSLACG00000018678	SFSWAP	69	57.833	ENSPNYG00000012660	sfswap	65	60.204	Pundamilia_nyererei
ENSLACG00000018678	SFSWAP	100	62.786	ENSRNOG00000000931	Sfswap	99	65.517	Rattus_norvegicus
ENSLACG00000018678	SFSWAP	96	61.597	ENSRBIG00000036330	SFSWAP	100	60.622	Rhinopithecus_bieti
ENSLACG00000018678	SFSWAP	96	65.809	ENSRROG00000032001	SFSWAP	100	64.227	Rhinopithecus_roxellana
ENSLACG00000018678	SFSWAP	96	65.171	ENSSBOG00000026217	SFSWAP	100	64.645	Saimiri_boliviensis_boliviensis
ENSLACG00000018678	SFSWAP	92	64.804	ENSSHAG00000014232	SFSWAP	100	64.333	Sarcophilus_harrisii
ENSLACG00000018678	SFSWAP	69	56.857	ENSSFOG00015000766	sfswap	72	58.179	Scleropages_formosus
ENSLACG00000018678	SFSWAP	70	57.386	ENSSMAG00000018718	sfswap	68	56.534	Scophthalmus_maximus
ENSLACG00000018678	SFSWAP	75	57.645	ENSSDUG00000021680	sfswap	71	57.279	Seriola_dumerili
ENSLACG00000018678	SFSWAP	75	57.162	ENSSLDG00000010835	sfswap	67	58.723	Seriola_lalandi_dorsalis
ENSLACG00000018678	SFSWAP	73	74.603	ENSSARG00000000424	SFSWAP	80	78.571	Sorex_araneus
ENSLACG00000018678	SFSWAP	86	59.976	ENSSPUG00000010272	SFSWAP	99	61.511	Sphenodon_punctatus
ENSLACG00000018678	SFSWAP	71	58.179	ENSSPAG00000014310	sfswap	97	49.704	Stegastes_partitus
ENSLACG00000018678	SFSWAP	96	65.310	ENSSSCG00000009744	SFSWAP	100	64.330	Sus_scrofa
ENSLACG00000018678	SFSWAP	96	65.380	ENSTGUG00000004623	SFSWAP	99	65.426	Taeniopygia_guttata
ENSLACG00000018678	SFSWAP	89	70.712	ENSTTRG00000013478	SFSWAP	94	91.111	Tursiops_truncatus
ENSLACG00000018678	SFSWAP	96	64.263	ENSUAMG00000016807	SFSWAP	100	61.792	Ursus_americanus
ENSLACG00000018678	SFSWAP	84	62.716	ENSUMAG00000002957	SFSWAP	81	63.081	Ursus_maritimus
ENSLACG00000018678	SFSWAP	96	65.521	ENSVVUG00000010753	SFSWAP	100	63.946	Vulpes_vulpes
ENSLACG00000018678	SFSWAP	96	55.106	ENSXETG00000009350	sfswap	95	63.209	Xenopus_tropicalis
ENSLACG00000018678	SFSWAP	71	59.684	ENSXMAG00000009020	sfswap	70	59.433	Xiphophorus_maculatus