EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018706 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 6934 bases
Position: chrJH126577.1:4161235-4168168
Accession: 102362625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021287	La	PF05383.17	4.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021428	LARP6-201	2418	XM_005987764	ENSLACP00000021287	512 (aa)	XP_005987826	H3BHB6

Gene Model

Click here to download ENSLACG00000018706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018706	LARP6	80	45.647	ENSLACG00000002786	-	98	45.412
ENSLACG00000018706	LARP6	79	43.301	ENSLACG00000014893	-	84	42.823

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018706	LARP6	90	64.583	ENSG00000166173	LARP6	97	65.208	Homo_sapiens
ENSLACG00000018706	LARP6	95	61.933	ENSAPOG00000021773	larp6a	72	61.538	Acanthochromis_polyacanthus
ENSLACG00000018706	LARP6	82	67.059	ENSAMEG00000008897	LARP6	99	67.059	Ailuropoda_melanoleuca
ENSLACG00000018706	LARP6	91	64.609	ENSACIG00000005166	larp6a	94	64.198	Amphilophus_citrinellus
ENSLACG00000018706	LARP6	95	61.933	ENSAOCG00000002284	larp6a	72	61.538	Amphiprion_ocellaris
ENSLACG00000018706	LARP6	95	61.933	ENSAPEG00000008077	larp6a	96	61.538	Amphiprion_percula
ENSLACG00000018706	LARP6	95	62.376	ENSATEG00000004018	larp6a	71	61.980	Anabas_testudineus
ENSLACG00000018706	LARP6	81	70.588	ENSAPLG00000009914	LARP6	99	70.588	Anas_platyrhynchos
ENSLACG00000018706	LARP6	79	70.000	ENSACAG00000008613	LARP6	97	69.756	Anolis_carolinensis
ENSLACG00000018706	LARP6	90	64.375	ENSANAG00000024860	LARP6	97	65.000	Aotus_nancymaae
ENSLACG00000018706	LARP6	95	62.327	ENSACLG00000018561	larp6a	70	62.083	Astatotilapia_calliptera
ENSLACG00000018706	LARP6	80	43.095	ENSAMXG00000036816	-	93	42.506	Astyanax_mexicanus
ENSLACG00000018706	LARP6	89	62.994	ENSAMXG00000029387	larp6a	72	63.825	Astyanax_mexicanus
ENSLACG00000018706	LARP6	90	63.958	ENSBTAG00000003915	LARP6	97	64.375	Bos_taurus
ENSLACG00000018706	LARP6	88	65.190	ENSCJAG00000046236	-	96	65.190	Callithrix_jacchus
ENSLACG00000018706	LARP6	88	64.768	ENSCJAG00000018642	-	96	65.401	Callithrix_jacchus
ENSLACG00000018706	LARP6	81	68.085	ENSCAFG00000017616	LARP6	99	68.085	Canis_familiaris
ENSLACG00000018706	LARP6	90	64.167	ENSCAFG00020007296	LARP6	98	65.073	Canis_lupus_dingo
ENSLACG00000018706	LARP6	90	63.750	ENSCHIG00000013742	LARP6	97	64.167	Capra_hircus
ENSLACG00000018706	LARP6	81	67.849	ENSTSYG00000028124	LARP6	86	67.849	Carlito_syrichta
ENSLACG00000018706	LARP6	81	66.588	ENSCAPG00000015452	LARP6	99	66.588	Cavia_aperea
ENSLACG00000018706	LARP6	89	63.466	ENSCPOG00000022687	LARP6	96	63.466	Cavia_porcellus
ENSLACG00000018706	LARP6	90	64.315	ENSCCAG00000036320	LARP6	97	64.938	Cebus_capucinus
ENSLACG00000018706	LARP6	90	64.583	ENSCATG00000042432	LARP6	97	65.208	Cercocebus_atys
ENSLACG00000018706	LARP6	89	63.598	ENSCLAG00000007893	LARP6	96	64.644	Chinchilla_lanigera
ENSLACG00000018706	LARP6	90	64.583	ENSCSAG00000013672	LARP6	97	65.208	Chlorocebus_sabaeus
ENSLACG00000018706	LARP6	89	63.389	ENSCHOG00000003318	LARP6	99	63.389	Choloepus_hoffmanni
ENSLACG00000018706	LARP6	99	67.946	ENSCPBG00000010771	LARP6	99	68.391	Chrysemys_picta_bellii
ENSLACG00000018706	LARP6	81	67.849	ENSCANG00000025833	LARP6	99	67.849	Colobus_angolensis_palliatus
ENSLACG00000018706	LARP6	90	63.125	ENSCGRG00001024472	Larp6	97	63.750	Cricetulus_griseus_chok1gshd
ENSLACG00000018706	LARP6	90	63.125	ENSCGRG00000004527	Larp6	97	63.750	Cricetulus_griseus_crigri
ENSLACG00000018706	LARP6	95	62.846	ENSCSEG00000011196	larp6a	75	61.782	Cynoglossus_semilaevis
ENSLACG00000018706	LARP6	96	62.524	ENSCVAG00000009605	larp6a	75	62.136	Cyprinodon_variegatus
ENSLACG00000018706	LARP6	89	65.532	ENSDARG00000005355	larp6a	97	68.884	Danio_rerio
ENSLACG00000018706	LARP6	89	63.883	ENSDNOG00000042993	LARP6	97	63.883	Dasypus_novemcinctus
ENSLACG00000018706	LARP6	90	62.474	ENSDORG00000023910	Larp6	97	62.474	Dipodomys_ordii
ENSLACG00000018706	LARP6	70	64.683	ENSETEG00000020390	LARP6	76	64.683	Echinops_telfairi
ENSLACG00000018706	LARP6	90	64.657	ENSEASG00005005490	LARP6	71	65.073	Equus_asinus_asinus
ENSLACG00000018706	LARP6	90	65.000	ENSECAG00000014190	LARP6	97	65.281	Equus_caballus
ENSLACG00000018706	LARP6	89	63.674	ENSELUG00000007341	larp6a	69	62.004	Esox_lucius
ENSLACG00000018706	LARP6	89	64.017	ENSFCAG00000001361	LARP6	96	64.435	Felis_catus
ENSLACG00000018706	LARP6	90	67.804	ENSFALG00000012389	LARP6	99	67.789	Ficedula_albicollis
ENSLACG00000018706	LARP6	82	67.294	ENSFDAG00000019994	LARP6	83	67.294	Fukomys_damarensis
ENSLACG00000018706	LARP6	96	62.282	ENSFHEG00000010312	larp6a	74	61.850	Fundulus_heteroclitus
ENSLACG00000018706	LARP6	95	65.800	ENSGALG00000004046	LARP6	99	65.996	Gallus_gallus
ENSLACG00000018706	LARP6	96	60.735	ENSGAFG00000009426	larp6a	74	60.542	Gambusia_affinis
ENSLACG00000018706	LARP6	82	65.675	ENSGACG00000014622	larp6a	98	65.446	Gasterosteus_aculeatus
ENSLACG00000018706	LARP6	91	66.667	ENSGAGG00000010802	LARP6	70	67.292	Gopherus_agassizii
ENSLACG00000018706	LARP6	81	67.849	ENSGGOG00000024151	LARP6	99	67.849	Gorilla_gorilla
ENSLACG00000018706	LARP6	95	62.327	ENSHBUG00000021014	larp6a	70	62.083	Haplochromis_burtoni
ENSLACG00000018706	LARP6	89	65.272	ENSHGLG00000015112	LARP6	96	65.690	Heterocephalus_glaber_female
ENSLACG00000018706	LARP6	81	68.322	ENSHGLG00100013159	LARP6	99	68.322	Heterocephalus_glaber_male
ENSLACG00000018706	LARP6	89	62.737	ENSHCOG00000001241	larp6a	90	62.737	Hippocampus_comes
ENSLACG00000018706	LARP6	84	37.558	ENSIPUG00000002828	-	93	37.170	Ictalurus_punctatus
ENSLACG00000018706	LARP6	91	61.934	ENSIPUG00000010187	larp6	73	62.757	Ictalurus_punctatus
ENSLACG00000018706	LARP6	84	66.667	ENSSTOG00000024279	LARP6	94	66.667	Ictidomys_tridecemlineatus
ENSLACG00000018706	LARP6	89	63.655	ENSJJAG00000011013	Larp6	97	63.866	Jaculus_jaculus
ENSLACG00000018706	LARP6	89	64.496	ENSKMAG00000001702	larp6a	65	64.076	Kryptolebias_marmoratus
ENSLACG00000018706	LARP6	89	63.002	ENSLBEG00000000170	larp6a	90	62.579	Labrus_bergylta
ENSLACG00000018706	LARP6	82	44.622	ENSLOCG00000008547	-	84	45.413	Lepisosteus_oculatus
ENSLACG00000018706	LARP6	90	66.878	ENSLOCG00000014592	larp6a	70	66.878	Lepisosteus_oculatus
ENSLACG00000018706	LARP6	86	67.416	ENSLAFG00000016343	LARP6	99	67.416	Loxodonta_africana
ENSLACG00000018706	LARP6	86	66.592	ENSMFAG00000035507	LARP6	99	66.592	Macaca_fascicularis
ENSLACG00000018706	LARP6	89	65.319	ENSMMUG00000004429	LARP6	97	65.319	Macaca_mulatta
ENSLACG00000018706	LARP6	90	64.583	ENSMNEG00000045335	LARP6	97	65.208	Macaca_nemestrina
ENSLACG00000018706	LARP6	81	67.849	ENSMLEG00000038587	LARP6	99	67.849	Mandrillus_leucophaeus
ENSLACG00000018706	LARP6	97	61.583	ENSMAMG00000005261	larp6a	73	61.197	Mastacembelus_armatus
ENSLACG00000018706	LARP6	95	62.327	ENSMZEG00005005774	larp6a	70	62.083	Maylandia_zebra
ENSLACG00000018706	LARP6	81	70.449	ENSMGAG00000005077	LARP6	99	70.449	Meleagris_gallopavo
ENSLACG00000018706	LARP6	90	63.958	ENSMAUG00000018486	Larp6	97	64.583	Mesocricetus_auratus
ENSLACG00000018706	LARP6	84	66.438	ENSMICG00000011234	LARP6	96	64.017	Microcebus_murinus
ENSLACG00000018706	LARP6	90	62.917	ENSMOCG00000010492	Larp6	97	63.542	Microtus_ochrogaster
ENSLACG00000018706	LARP6	89	64.831	ENSMMOG00000016284	larp6a	92	64.407	Mola_mola
ENSLACG00000018706	LARP6	90	62.033	ENSMODG00000009034	LARP6	93	62.213	Monodelphis_domestica
ENSLACG00000018706	LARP6	97	61.702	ENSMALG00000014439	larp6a	96	62.178	Monopterus_albus
ENSLACG00000018706	LARP6	90	64.167	MGP_CAROLIEiJ_G0032314	Larp6	97	64.167	Mus_caroli
ENSLACG00000018706	LARP6	90	63.542	ENSMUSG00000034839	Larp6	97	64.583	Mus_musculus
ENSLACG00000018706	LARP6	90	63.333	MGP_PahariEiJ_G0015180	Larp6	97	63.958	Mus_pahari
ENSLACG00000018706	LARP6	90	63.333	MGP_SPRETEiJ_G0033452	Larp6	97	64.375	Mus_spretus
ENSLACG00000018706	LARP6	81	67.217	ENSMPUG00000017086	LARP6	99	67.217	Mustela_putorius_furo
ENSLACG00000018706	LARP6	90	64.583	ENSMLUG00000010319	LARP6	97	64.927	Myotis_lucifugus
ENSLACG00000018706	LARP6	90	63.202	ENSNGAG00000014238	Larp6	97	63.202	Nannospalax_galili
ENSLACG00000018706	LARP6	95	62.475	ENSNBRG00000008120	larp6a	97	62.083	Neolamprologus_brichardi
ENSLACG00000018706	LARP6	90	64.718	ENSNLEG00000013691	LARP6	97	65.344	Nomascus_leucogenys
ENSLACG00000018706	LARP6	72	67.203	ENSMEUG00000002270	LARP6	96	55.556	Notamacropus_eugenii
ENSLACG00000018706	LARP6	68	62.040	ENSOPRG00000004868	-	99	62.393	Ochotona_princeps
ENSLACG00000018706	LARP6	89	61.146	ENSODEG00000015958	LARP6	96	63.057	Octodon_degus
ENSLACG00000018706	LARP6	95	62.549	ENSONIG00000002901	larp6a	97	62.157	Oreochromis_niloticus
ENSLACG00000018706	LARP6	78	65.757	ENSOCUG00000009306	LARP6	99	64.663	Oryctolagus_cuniculus
ENSLACG00000018706	LARP6	91	64.403	ENSORLG00000014256	larp6a	94	63.992	Oryzias_latipes
ENSLACG00000018706	LARP6	89	64.916	ENSORLG00020019657	larp6a	68	64.496	Oryzias_latipes_hni
ENSLACG00000018706	LARP6	89	65.190	ENSORLG00015017915	larp6a	68	64.768	Oryzias_latipes_hsok
ENSLACG00000018706	LARP6	89	65.546	ENSOMEG00000017049	larp6a	68	65.126	Oryzias_melastigma
ENSLACG00000018706	LARP6	89	63.522	ENSOGAG00000000522	LARP6	96	63.732	Otolemur_garnettii
ENSLACG00000018706	LARP6	82	66.824	ENSOARG00000018750	LARP6	98	66.824	Ovis_aries
ENSLACG00000018706	LARP6	81	67.849	ENSPPAG00000031247	LARP6	99	67.849	Pan_paniscus
ENSLACG00000018706	LARP6	89	63.674	ENSPPRG00000011282	LARP6	96	64.226	Panthera_pardus
ENSLACG00000018706	LARP6	81	66.667	ENSPTIG00000015318	LARP6	86	66.667	Panthera_tigris_altaica
ENSLACG00000018706	LARP6	90	64.583	ENSPTRG00000007234	LARP6	97	65.208	Pan_troglodytes
ENSLACG00000018706	LARP6	90	64.583	ENSPANG00000016362	LARP6	97	65.208	Papio_anubis
ENSLACG00000018706	LARP6	89	64.241	ENSPKIG00000004511	LARP6	70	62.578	Paramormyrops_kingsleyae
ENSLACG00000018706	LARP6	89	65.957	ENSPKIG00000020103	larp6a	90	65.532	Paramormyrops_kingsleyae
ENSLACG00000018706	LARP6	56	78.505	ENSPSIG00000009071	LARP6	92	72.881	Pelodiscus_sinensis
ENSLACG00000018706	LARP6	91	64.536	ENSPMGG00000006958	larp6a	95	64.124	Periophthalmus_magnuspinnatus
ENSLACG00000018706	LARP6	90	63.958	ENSPEMG00000012909	Larp6	97	63.958	Peromyscus_maniculatus_bairdii
ENSLACG00000018706	LARP6	90	63.278	ENSPCIG00000020765	LARP6	93	63.768	Phascolarctos_cinereus
ENSLACG00000018706	LARP6	89	64.435	ENSPFOG00000014175	larp6a	90	64.226	Poecilia_formosa
ENSLACG00000018706	LARP6	91	64.256	ENSPLAG00000011105	larp6a	68	63.580	Poecilia_latipinna
ENSLACG00000018706	LARP6	91	64.050	ENSPMEG00000011085	larp6a	69	63.374	Poecilia_mexicana
ENSLACG00000018706	LARP6	91	64.669	ENSPREG00000008067	larp6a	69	64.256	Poecilia_reticulata
ENSLACG00000018706	LARP6	90	64.375	ENSPPYG00000006604	LARP6	97	64.927	Pongo_abelii
ENSLACG00000018706	LARP6	61	73.494	ENSPCAG00000014197	LARP6	75	73.494	Procavia_capensis
ENSLACG00000018706	LARP6	89	63.808	ENSPCOG00000022934	LARP6	96	64.226	Propithecus_coquereli
ENSLACG00000018706	LARP6	90	65.000	ENSPVAG00000005618	LARP6	97	65.281	Pteropus_vampyrus
ENSLACG00000018706	LARP6	95	62.475	ENSPNYG00000009835	larp6a	97	62.083	Pundamilia_nyererei
ENSLACG00000018706	LARP6	89	62.292	ENSPNAG00000017966	larp6a	78	61.875	Pygocentrus_nattereri
ENSLACG00000018706	LARP6	90	63.542	ENSRNOG00000012438	Larp6	97	64.301	Rattus_norvegicus
ENSLACG00000018706	LARP6	90	64.435	ENSRBIG00000032902	LARP6	97	64.435	Rhinopithecus_bieti
ENSLACG00000018706	LARP6	90	64.583	ENSRROG00000043074	LARP6	97	65.208	Rhinopithecus_roxellana
ENSLACG00000018706	LARP6	81	67.849	ENSSBOG00000024190	LARP6	99	67.849	Saimiri_boliviensis_boliviensis
ENSLACG00000018706	LARP6	82	65.957	ENSSHAG00000018495	LARP6	99	65.957	Sarcophilus_harrisii
ENSLACG00000018706	LARP6	91	57.531	ENSSFOG00015002254	LARP6	92	58.577	Scleropages_formosus
ENSLACG00000018706	LARP6	89	63.326	ENSSFOG00015023268	larp6a	91	63.694	Scleropages_formosus
ENSLACG00000018706	LARP6	89	65.751	ENSSMAG00000009953	larp6a	67	65.328	Scophthalmus_maximus
ENSLACG00000018706	LARP6	95	62.722	ENSSDUG00000007438	larp6a	71	62.327	Seriola_dumerili
ENSLACG00000018706	LARP6	95	62.722	ENSSLDG00000016647	larp6a	72	62.327	Seriola_lalandi_dorsalis
ENSLACG00000018706	LARP6	81	73.747	ENSSPUG00000011312	LARP6	99	73.923	Sphenodon_punctatus
ENSLACG00000018706	LARP6	95	62.130	ENSSPAG00000020502	larp6a	72	61.736	Stegastes_partitus
ENSLACG00000018706	LARP6	90	63.750	ENSSSCG00000004974	LARP6	97	64.375	Sus_scrofa
ENSLACG00000018706	LARP6	81	69.811	ENSTGUG00000005808	LARP6	99	69.811	Taeniopygia_guttata
ENSLACG00000018706	LARP6	97	61.272	ENSTRUG00000003151	larp6a	75	61.079	Takifugu_rubripes
ENSLACG00000018706	LARP6	91	61.649	ENSTNIG00000011926	larp6a	97	62.083	Tetraodon_nigroviridis
ENSLACG00000018706	LARP6	81	65.877	ENSTBEG00000015077	LARP6	99	65.877	Tupaia_belangeri
ENSLACG00000018706	LARP6	82	66.824	ENSUAMG00000010467	LARP6	85	66.824	Ursus_americanus
ENSLACG00000018706	LARP6	81	67.849	ENSVVUG00000015227	LARP6	94	67.849	Vulpes_vulpes
ENSLACG00000018706	LARP6	92	72.824	ENSXETG00000020340	larp6	96	72.824	Xenopus_tropicalis
ENSLACG00000018706	LARP6	91	62.705	ENSXCOG00000012654	larp6a	95	62.971	Xiphophorus_couchianus
ENSLACG00000018706	LARP6	91	63.169	ENSXMAG00000021015	larp6a	66	62.757	Xiphophorus_maculatus