EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018719 (Gene tree)
Gene ID: 102358092
Gene Symbol: SARNP
Alias: CIP29|Hcc-1|THO1
Full Name: SAP domain containing ribonucleoprotein
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 49050 bases
Position: chrJH126563.1:4202914-4251963
Accession: 102358092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021302	SAP	PF02037.27	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021443	SARNP-201	3946	XM_005986182	ENSLACP00000021302	222 (aa)	XP_005986244	H3BHD1

Gene Model

Click here to download ENSLACG00000018719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018719	SARNP	78	41.341	ENSLACG00000014810	-	94	41.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018719	SARNP	88	71.859	ENSG00000205323	SARNP	95	71.859	Homo_sapiens
ENSLACG00000018719	SARNP	80	58.791	ENSAPOG00000005247	sarnp	74	58.791	Acanthochromis_polyacanthus
ENSLACG00000018719	SARNP	88	71.357	ENSAMEG00000011769	SARNP	95	71.357	Ailuropoda_melanoleuca
ENSLACG00000018719	SARNP	89	59.512	ENSAPEG00000016710	sarnp	96	60.000	Amphiprion_percula
ENSLACG00000018719	SARNP	89	58.621	ENSATEG00000024594	sarnp	96	58.621	Anabas_testudineus
ENSLACG00000018719	SARNP	89	72.000	ENSACAG00000015446	SARNP	94	72.000	Anolis_carolinensis
ENSLACG00000018719	SARNP	88	72.362	ENSANAG00000027405	-	95	72.362	Aotus_nancymaae
ENSLACG00000018719	SARNP	88	64.141	ENSANAG00000025021	-	94	64.141	Aotus_nancymaae
ENSLACG00000018719	SARNP	89	60.199	ENSACLG00000016479	sarnp	96	60.199	Astatotilapia_calliptera
ENSLACG00000018719	SARNP	89	58.128	ENSAMXG00000004834	sarnp	96	58.128	Astyanax_mexicanus
ENSLACG00000018719	SARNP	71	65.190	ENSBTAG00000032446	-	79	65.190	Bos_taurus
ENSLACG00000018719	SARNP	88	71.357	ENSBTAG00000020662	SARNP	95	71.357	Bos_taurus
ENSLACG00000018719	SARNP	88	71.357	ENSCJAG00000007853	-	95	70.854	Callithrix_jacchus
ENSLACG00000018719	SARNP	89	69.154	ENSCAFG00000023714	SARNP	96	69.154	Canis_familiaris
ENSLACG00000018719	SARNP	93	64.286	ENSCAFG00020026107	SARNP	97	63.810	Canis_lupus_dingo
ENSLACG00000018719	SARNP	88	62.564	ENSCHIG00000017443	-	93	62.564	Capra_hircus
ENSLACG00000018719	SARNP	87	67.513	ENSCHIG00000013335	-	94	67.513	Capra_hircus
ENSLACG00000018719	SARNP	88	71.357	ENSTSYG00000009225	SARNP	95	71.357	Carlito_syrichta
ENSLACG00000018719	SARNP	88	71.859	ENSCPOG00000011755	-	95	71.859	Cavia_porcellus
ENSLACG00000018719	SARNP	95	59.535	ENSCCAG00000004296	-	97	59.809	Cebus_capucinus
ENSLACG00000018719	SARNP	87	57.071	ENSCCAG00000030892	-	91	57.071	Cebus_capucinus
ENSLACG00000018719	SARNP	88	71.859	ENSCCAG00000019247	-	95	71.859	Cebus_capucinus
ENSLACG00000018719	SARNP	88	62.814	ENSCATG00000042076	-	93	62.814	Cercocebus_atys
ENSLACG00000018719	SARNP	88	71.859	ENSCATG00000045088	SARNP	95	71.859	Cercocebus_atys
ENSLACG00000018719	SARNP	88	71.859	ENSCLAG00000007774	-	95	71.859	Chinchilla_lanigera
ENSLACG00000018719	SARNP	88	71.859	ENSCSAG00000005303	SARNP	93	71.859	Chlorocebus_sabaeus
ENSLACG00000018719	SARNP	87	70.558	ENSCHOG00000005081	SARNP	99	70.558	Choloepus_hoffmanni
ENSLACG00000018719	SARNP	89	74.000	ENSCPBG00000012618	SARNP	95	72.000	Chrysemys_picta_bellii
ENSLACG00000018719	SARNP	89	36.697	ENSCING00000015811	-	94	39.252	Ciona_intestinalis
ENSLACG00000018719	SARNP	88	71.859	ENSCANG00000027918	-	95	71.859	Colobus_angolensis_palliatus
ENSLACG00000018719	SARNP	88	57.868	ENSCGRG00001013880	-	94	57.868	Cricetulus_griseus_chok1gshd
ENSLACG00000018719	SARNP	88	71.357	ENSCGRG00001018129	-	95	71.357	Cricetulus_griseus_chok1gshd
ENSLACG00000018719	SARNP	88	53.030	ENSCGRG00001022403	-	75	52.525	Cricetulus_griseus_chok1gshd
ENSLACG00000018719	SARNP	88	59.091	ENSCGRG00000000109	-	73	58.586	Cricetulus_griseus_crigri
ENSLACG00000018719	SARNP	88	71.357	ENSCGRG00000015182	-	95	71.357	Cricetulus_griseus_crigri
ENSLACG00000018719	SARNP	88	57.868	ENSCGRG00000004298	-	94	57.868	Cricetulus_griseus_crigri
ENSLACG00000018719	SARNP	89	57.921	ENSCVAG00000010924	sarnp	96	57.921	Cyprinodon_variegatus
ENSLACG00000018719	SARNP	89	61.307	ENSDARG00000059357	sarnp	96	61.307	Danio_rerio
ENSLACG00000018719	SARNP	88	70.854	ENSDNOG00000014518	SARNP	95	70.854	Dasypus_novemcinctus
ENSLACG00000018719	SARNP	88	71.859	ENSDORG00000001065	-	95	71.859	Dipodomys_ordii
ENSLACG00000018719	SARNP	89	54.040	ENSEBUG00000016080	sarnp	94	52.792	Eptatretus_burgeri
ENSLACG00000018719	SARNP	92	69.082	ENSECAG00000000708	SARNP	95	71.357	Equus_caballus
ENSLACG00000018719	SARNP	89	57.143	ENSELUG00000020983	sarnp	96	57.143	Esox_lucius
ENSLACG00000018719	SARNP	89	57.843	ENSELUG00000006786	HCC1	95	57.635	Esox_lucius
ENSLACG00000018719	SARNP	88	70.352	ENSFCAG00000037076	SARNP	95	70.352	Felis_catus
ENSLACG00000018719	SARNP	82	68.681	ENSFALG00000000679	SARNP	72	68.132	Ficedula_albicollis
ENSLACG00000018719	SARNP	88	71.859	ENSFDAG00000007766	SARNP	95	71.859	Fukomys_damarensis
ENSLACG00000018719	SARNP	89	58.416	ENSFHEG00000012192	sarnp	96	58.416	Fundulus_heteroclitus
ENSLACG00000018719	SARNP	89	55.446	ENSGMOG00000011467	sarnp	95	54.455	Gadus_morhua
ENSLACG00000018719	SARNP	89	73.000	ENSGALG00000030342	SARNP	95	73.000	Gallus_gallus
ENSLACG00000018719	SARNP	89	57.921	ENSGAFG00000019183	sarnp	96	57.921	Gambusia_affinis
ENSLACG00000018719	SARNP	89	59.204	ENSGACG00000011615	sarnp	96	59.204	Gasterosteus_aculeatus
ENSLACG00000018719	SARNP	85	65.104	ENSGGOG00000041309	-	96	65.327	Gorilla_gorilla
ENSLACG00000018719	SARNP	88	71.859	ENSGGOG00000013217	SARNP	95	71.859	Gorilla_gorilla
ENSLACG00000018719	SARNP	89	60.697	ENSHBUG00000008761	sarnp	96	60.697	Haplochromis_burtoni
ENSLACG00000018719	SARNP	88	71.357	ENSHGLG00000016869	SARNP	95	71.357	Heterocephalus_glaber_female
ENSLACG00000018719	SARNP	88	71.357	ENSHGLG00100014657	SARNP	95	71.357	Heterocephalus_glaber_male
ENSLACG00000018719	SARNP	89	53.171	ENSHCOG00000015510	sarnp	96	54.634	Hippocampus_comes
ENSLACG00000018719	SARNP	89	57.619	ENSIPUG00000012503	Sarnp	96	59.901	Ictalurus_punctatus
ENSLACG00000018719	SARNP	88	71.859	ENSSTOG00000000283	SARNP	95	71.859	Ictidomys_tridecemlineatus
ENSLACG00000018719	SARNP	88	71.859	ENSJJAG00000001070	-	95	71.859	Jaculus_jaculus
ENSLACG00000018719	SARNP	83	64.398	ENSJJAG00000011057	-	88	64.398	Jaculus_jaculus
ENSLACG00000018719	SARNP	89	57.843	ENSKMAG00000013400	sarnp	96	58.333	Kryptolebias_marmoratus
ENSLACG00000018719	SARNP	89	57.426	ENSLBEG00000025038	sarnp	96	58.049	Labrus_bergylta
ENSLACG00000018719	SARNP	89	63.902	ENSLOCG00000003621	sarnp	95	65.385	Lepisosteus_oculatus
ENSLACG00000018719	SARNP	88	70.352	ENSLAFG00000015053	SARNP	95	70.352	Loxodonta_africana
ENSLACG00000018719	SARNP	88	71.859	ENSMFAG00000045270	SARNP	95	71.859	Macaca_fascicularis
ENSLACG00000018719	SARNP	88	65.829	ENSMFAG00000032419	-	92	65.829	Macaca_fascicularis
ENSLACG00000018719	SARNP	88	66.332	ENSMMUG00000037731	-	95	66.332	Macaca_mulatta
ENSLACG00000018719	SARNP	88	71.859	ENSMMUG00000006289	-	95	71.859	Macaca_mulatta
ENSLACG00000018719	SARNP	88	71.859	ENSMNEG00000044633	-	95	71.859	Macaca_nemestrina
ENSLACG00000018719	SARNP	88	60.606	ENSMNEG00000030688	-	92	57.071	Macaca_nemestrina
ENSLACG00000018719	SARNP	88	65.327	ENSMNEG00000041520	-	95	65.327	Macaca_nemestrina
ENSLACG00000018719	SARNP	93	59.809	ENSMLEG00000037790	-	99	60.766	Mandrillus_leucophaeus
ENSLACG00000018719	SARNP	56	68.000	ENSMLEG00000038545	-	77	67.200	Mandrillus_leucophaeus
ENSLACG00000018719	SARNP	89	59.512	ENSMAMG00000005942	sarnp	100	57.767	Mastacembelus_armatus
ENSLACG00000018719	SARNP	89	60.697	ENSMZEG00005023533	sarnp	96	60.697	Maylandia_zebra
ENSLACG00000018719	SARNP	89	73.000	ENSMGAG00000001807	SARNP	95	73.000	Meleagris_gallopavo
ENSLACG00000018719	SARNP	88	71.859	ENSMAUG00000005256	-	95	71.859	Mesocricetus_auratus
ENSLACG00000018719	SARNP	88	70.854	ENSMICG00000010902	-	95	70.854	Microcebus_murinus
ENSLACG00000018719	SARNP	88	71.357	ENSMOCG00000006502	-	95	71.357	Microtus_ochrogaster
ENSLACG00000018719	SARNP	89	54.040	ENSMMOG00000013258	sarnp	95	55.051	Mola_mola
ENSLACG00000018719	SARNP	82	59.459	ENSMALG00000009106	sarnp	80	59.563	Monopterus_albus
ENSLACG00000018719	SARNP	88	70.352	MGP_CAROLIEiJ_G0015958	-	95	68.342	Mus_caroli
ENSLACG00000018719	SARNP	88	70.352	ENSMUSG00000078427	Sarnp	95	68.342	Mus_musculus
ENSLACG00000018719	SARNP	83	70.053	MGP_PahariEiJ_G0031126	-	95	70.053	Mus_pahari
ENSLACG00000018719	SARNP	88	70.352	MGP_SPRETEiJ_G0016783	-	95	68.342	Mus_spretus
ENSLACG00000018719	SARNP	88	71.357	ENSMPUG00000000885	SARNP	95	71.357	Mustela_putorius_furo
ENSLACG00000018719	SARNP	70	67.516	ENSMLUG00000003565	SARNP	94	67.516	Myotis_lucifugus
ENSLACG00000018719	SARNP	88	70.352	ENSNGAG00000010245	-	95	70.854	Nannospalax_galili
ENSLACG00000018719	SARNP	77	67.052	ENSNLEG00000017599	-	94	67.052	Nomascus_leucogenys
ENSLACG00000018719	SARNP	88	66.834	ENSMEUG00000014879	SARNP	95	66.834	Notamacropus_eugenii
ENSLACG00000018719	SARNP	88	54.271	ENSOPRG00000007733	SARNP	95	55.779	Ochotona_princeps
ENSLACG00000018719	SARNP	85	56.842	ENSODEG00000012047	-	95	58.586	Octodon_degus
ENSLACG00000018719	SARNP	88	71.357	ENSODEG00000004608	-	95	71.357	Octodon_degus
ENSLACG00000018719	SARNP	89	60.697	ENSONIG00000016523	sarnp	96	60.697	Oreochromis_niloticus
ENSLACG00000018719	SARNP	88	71.287	ENSOANG00000002882	SARNP	99	70.792	Ornithorhynchus_anatinus
ENSLACG00000018719	SARNP	88	70.500	ENSOCUG00000010117	SARNP	96	70.500	Oryctolagus_cuniculus
ENSLACG00000018719	SARNP	89	58.333	ENSORLG00000029565	sarnp	85	56.436	Oryzias_latipes
ENSLACG00000018719	SARNP	89	58.333	ENSORLG00015021649	sarnp	85	56.436	Oryzias_latipes_hsok
ENSLACG00000018719	SARNP	89	56.931	ENSOMEG00000014699	sarnp	96	56.931	Oryzias_melastigma
ENSLACG00000018719	SARNP	71	65.823	ENSOGAG00000001693	SARNP	95	65.823	Otolemur_garnettii
ENSLACG00000018719	SARNP	88	71.357	ENSOARG00000011218	SARNP	95	71.357	Ovis_aries
ENSLACG00000018719	SARNP	85	61.979	ENSPPAG00000042587	-	93	62.312	Pan_paniscus
ENSLACG00000018719	SARNP	88	71.859	ENSPPAG00000039513	SARNP	95	71.859	Pan_paniscus
ENSLACG00000018719	SARNP	88	70.352	ENSPPRG00000020704	SARNP	95	70.352	Panthera_pardus
ENSLACG00000018719	SARNP	88	71.859	ENSPTRG00000029747	SARNP	95	71.859	Pan_troglodytes
ENSLACG00000018719	SARNP	85	61.979	ENSPTRG00000046696	-	93	62.312	Pan_troglodytes
ENSLACG00000018719	SARNP	88	71.859	ENSPANG00000013149	-	95	71.859	Papio_anubis
ENSLACG00000018719	SARNP	88	63.819	ENSPANG00000006001	-	94	63.819	Papio_anubis
ENSLACG00000018719	SARNP	89	62.927	ENSPKIG00000002212	sarnp	96	64.039	Paramormyrops_kingsleyae
ENSLACG00000018719	SARNP	91	73.659	ENSPSIG00000002998	SARNP	97	71.707	Pelodiscus_sinensis
ENSLACG00000018719	SARNP	88	71.357	ENSPEMG00000000923	-	95	71.357	Peromyscus_maniculatus_bairdii
ENSLACG00000018719	SARNP	88	48.780	ENSPMAG00000009808	sarnp	92	51.691	Petromyzon_marinus
ENSLACG00000018719	SARNP	88	73.232	ENSPCIG00000024663	SARNP	98	73.232	Phascolarctos_cinereus
ENSLACG00000018719	SARNP	89	58.621	ENSPFOG00000013517	sarnp	96	58.621	Poecilia_formosa
ENSLACG00000018719	SARNP	89	58.416	ENSPLAG00000017096	sarnp	96	58.416	Poecilia_latipinna
ENSLACG00000018719	SARNP	89	58.416	ENSPMEG00000014306	sarnp	96	58.416	Poecilia_mexicana
ENSLACG00000018719	SARNP	86	48.969	ENSPREG00000019598	sarnp	78	49.738	Poecilia_reticulata
ENSLACG00000018719	SARNP	88	71.859	ENSPPYG00000004630	SARNP	95	71.859	Pongo_abelii
ENSLACG00000018719	SARNP	89	54.726	ENSPNAG00000000975	sarnp	96	56.931	Pygocentrus_nattereri
ENSLACG00000018719	SARNP	88	70.854	ENSRNOG00000030520	Sarnp	95	70.854	Rattus_norvegicus
ENSLACG00000018719	SARNP	88	64.000	ENSRBIG00000026928	-	92	64.000	Rhinopithecus_bieti
ENSLACG00000018719	SARNP	88	71.859	ENSRBIG00000039295	-	95	71.859	Rhinopithecus_bieti
ENSLACG00000018719	SARNP	84	69.312	ENSRBIG00000019503	-	91	69.312	Rhinopithecus_bieti
ENSLACG00000018719	SARNP	88	57.576	ENSRBIG00000037388	-	92	57.000	Rhinopithecus_bieti
ENSLACG00000018719	SARNP	88	64.000	ENSRROG00000044575	-	92	64.000	Rhinopithecus_roxellana
ENSLACG00000018719	SARNP	88	71.859	ENSRROG00000035177	-	95	71.859	Rhinopithecus_roxellana
ENSLACG00000018719	SARNP	88	69.347	ENSSBOG00000028635	-	93	69.347	Saimiri_boliviensis_boliviensis
ENSLACG00000018719	SARNP	91	54.412	ENSSBOG00000022787	-	98	53.922	Saimiri_boliviensis_boliviensis
ENSLACG00000018719	SARNP	88	71.859	ENSSBOG00000035337	-	95	71.859	Saimiri_boliviensis_boliviensis
ENSLACG00000018719	SARNP	88	72.864	ENSSHAG00000008865	SARNP	95	72.864	Sarcophilus_harrisii
ENSLACG00000018719	SARNP	89	63.942	ENSSFOG00015020709	sarnp	96	63.285	Scleropages_formosus
ENSLACG00000018719	SARNP	88	56.500	ENSSMAG00000018587	sarnp	95	56.500	Scophthalmus_maximus
ENSLACG00000018719	SARNP	89	60.396	ENSSDUG00000005484	sarnp	96	60.396	Seriola_dumerili
ENSLACG00000018719	SARNP	89	60.396	ENSSLDG00000003775	sarnp	96	60.396	Seriola_lalandi_dorsalis
ENSLACG00000018719	SARNP	88	45.729	ENSSARG00000004858	SARNP	95	47.236	Sorex_araneus
ENSLACG00000018719	SARNP	90	61.650	ENSSPUG00000015135	SARNP	98	60.396	Sphenodon_punctatus
ENSLACG00000018719	SARNP	88	71.859	ENSSSCG00000000364	SARNP	95	71.859	Sus_scrofa
ENSLACG00000018719	SARNP	81	65.000	ENSTGUG00000016126	SARNP	93	66.667	Taeniopygia_guttata
ENSLACG00000018719	SARNP	89	57.711	ENSTRUG00000009497	-	96	58.706	Takifugu_rubripes
ENSLACG00000018719	SARNP	89	52.607	ENSTNIG00000012432	sarnp	96	54.502	Tetraodon_nigroviridis
ENSLACG00000018719	SARNP	88	65.327	ENSTTRG00000009735	SARNP	94	64.824	Tursiops_truncatus
ENSLACG00000018719	SARNP	70	66.879	ENSUAMG00000015093	-	82	66.879	Ursus_americanus
ENSLACG00000018719	SARNP	83	70.053	ENSVPAG00000009515	SARNP	95	70.053	Vicugna_pacos
ENSLACG00000018719	SARNP	88	70.352	ENSVVUG00000022779	SARNP	95	70.352	Vulpes_vulpes
ENSLACG00000018719	SARNP	89	67.172	ENSXETG00000024657	sarnp	95	67.172	Xenopus_tropicalis
ENSLACG00000018719	SARNP	89	59.406	ENSXMAG00000009356	sarnp	96	59.406	Xiphophorus_maculatus