EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018788 (Gene tree)
Gene ID: 102352352
Gene Symbol: POC1A
Alias: DKFZP434C245|WDR51A
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 142875 bases
Position: chrJH126569.1:4427863-4570737
Accession: 102352352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021384	eIF2A	PF08662.11	2.2e-10	1	1
ENSLACP00000023492	eIF2A	PF08662.11	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021525	POC1A-202	1038	-	ENSLACP00000021384	346 (aa)	-	H3BHL3
ENSLACT00000026433	POC1A-201	2377	XM_005987043	ENSLACP00000023492	438 (aa)	XP_005987105	M3XL86

Gene Model

Click here to download ENSLACG00000018788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018788's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018788	POC1A	88	30.851	ENSLACG00000016317	PRPF4	52	31.875
ENSLACG00000018788	POC1A	88	34.221	ENSLACG00000018863	WDR5B	96	34.221
ENSLACG00000018788	POC1A	82	31.206	ENSLACG00000003434	PRPF19	56	31.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018788	POC1A	88	79.739	ENSG00000164087	POC1A	100	69.095	Homo_sapiens
ENSLACG00000018788	POC1A	92	83.448	ENSAPOG00000002677	POC1A	99	67.749	Acanthochromis_polyacanthus
ENSLACG00000018788	POC1A	88	78.758	ENSAMEG00000009136	POC1A	98	67.907	Ailuropoda_melanoleuca
ENSLACG00000018788	POC1A	90	78.526	ENSACIG00000018288	poc1a	99	64.062	Amphilophus_citrinellus
ENSLACG00000018788	POC1A	91	80.000	ENSAOCG00000001066	POC1A	99	69.124	Amphiprion_ocellaris
ENSLACG00000018788	POC1A	99	81.639	ENSAPEG00000005795	poc1a	89	81.639	Amphiprion_percula
ENSLACG00000018788	POC1A	91	86.435	ENSAPLG00000007756	POC1A	99	75.822	Anas_platyrhynchos
ENSLACG00000018788	POC1A	98	76.997	ENSANAG00000030897	POC1A	100	67.890	Aotus_nancymaae
ENSLACG00000018788	POC1A	92	78.864	ENSACLG00000017869	POC1A	99	65.319	Astatotilapia_calliptera
ENSLACG00000018788	POC1A	86	84.615	ENSAMXG00000024703	poc1a	84	84.615	Astyanax_mexicanus
ENSLACG00000018788	POC1A	92	80.069	ENSBTAG00000001471	POC1A	100	68.170	Bos_taurus
ENSLACG00000018788	POC1A	99	67.431	ENSCJAG00000005972	POC1A	100	67.431	Callithrix_jacchus
ENSLACG00000018788	POC1A	99	63.761	ENSCAFG00020022379	POC1A	100	63.761	Canis_lupus_dingo
ENSLACG00000018788	POC1A	92	77.987	ENSCHIG00000002571	POC1A	100	69.037	Capra_hircus
ENSLACG00000018788	POC1A	92	76.730	ENSTSYG00000008302	POC1A	100	68.119	Carlito_syrichta
ENSLACG00000018788	POC1A	92	79.630	ENSCAPG00000016201	POC1A	74	76.573	Cavia_aperea
ENSLACG00000018788	POC1A	89	78.896	ENSCPOG00000006740	POC1A	100	68.578	Cavia_porcellus
ENSLACG00000018788	POC1A	98	77.316	ENSCCAG00000023380	POC1A	100	68.119	Cebus_capucinus
ENSLACG00000018788	POC1A	92	76.730	ENSCATG00000021822	POC1A	100	68.349	Cercocebus_atys
ENSLACG00000018788	POC1A	97	73.443	ENSCLAG00000010593	POC1A	98	64.186	Chinchilla_lanigera
ENSLACG00000018788	POC1A	90	77.273	ENSCSAG00000013862	POC1A	100	68.844	Chlorocebus_sabaeus
ENSLACG00000018788	POC1A	84	89.338	ENSCPBG00000016728	POC1A	98	89.338	Chrysemys_picta_bellii
ENSLACG00000018788	POC1A	85	74.296	ENSCSAVG00000008477	-	98	63.391	Ciona_savignyi
ENSLACG00000018788	POC1A	92	76.730	ENSCANG00000033064	POC1A	98	69.643	Colobus_angolensis_palliatus
ENSLACG00000018788	POC1A	92	77.603	ENSCGRG00001007357	Poc1a	99	68.445	Cricetulus_griseus_chok1gshd
ENSLACG00000018788	POC1A	92	77.431	ENSCSEG00000010287	POC1A	96	63.805	Cynoglossus_semilaevis
ENSLACG00000018788	POC1A	90	77.311	ENSCVAG00000015594	POC1A	97	66.589	Cyprinodon_variegatus
ENSLACG00000018788	POC1A	85	64.014	ENSEBUG00000008013	poc1a	84	63.605	Eptatretus_burgeri
ENSLACG00000018788	POC1A	66	63.265	ENSEBUG00000008246	POC1A	55	63.265	Eptatretus_burgeri
ENSLACG00000018788	POC1A	92	68.868	ENSEBUG00000002614	POC1A	94	58.333	Eptatretus_burgeri
ENSLACG00000018788	POC1A	98	87.153	ENSELUG00000015504	poc1a	99	70.276	Esox_lucius
ENSLACG00000018788	POC1A	99	75.460	ENSFCAG00000015704	POC1A	100	67.431	Felis_catus
ENSLACG00000018788	POC1A	91	82.857	ENSFALG00000008922	POC1A	97	73.113	Ficedula_albicollis
ENSLACG00000018788	POC1A	92	76.415	ENSFDAG00000011606	POC1A	99	68.981	Fukomys_damarensis
ENSLACG00000018788	POC1A	89	77.670	ENSFHEG00000015504	POC1A	99	63.482	Fundulus_heteroclitus
ENSLACG00000018788	POC1A	91	82.857	ENSGALG00000034572	-	88	82.857	Gallus_gallus
ENSLACG00000018788	POC1A	90	78.526	ENSGACG00000007015	poc1a	98	67.824	Gasterosteus_aculeatus
ENSLACG00000018788	POC1A	91	85.987	ENSGAGG00000014637	POC1A	99	75.174	Gopherus_agassizii
ENSLACG00000018788	POC1A	88	79.739	ENSGGOG00000006652	POC1A	100	68.578	Gorilla_gorilla
ENSLACG00000018788	POC1A	98	79.016	ENSHGLG00000013436	POC1A	100	67.661	Heterocephalus_glaber_female
ENSLACG00000018788	POC1A	88	79.085	ENSHGLG00100003479	POC1A	100	67.661	Heterocephalus_glaber_male
ENSLACG00000018788	POC1A	92	80.887	ENSIPUG00000001227	POC1A	98	68.721	Ictalurus_punctatus
ENSLACG00000018788	POC1A	98	79.870	ENSSTOG00000002638	POC1A	100	68.349	Ictidomys_tridecemlineatus
ENSLACG00000018788	POC1A	92	77.358	ENSJJAG00000018739	Poc1a	100	68.337	Jaculus_jaculus
ENSLACG00000018788	POC1A	90	80.128	ENSLBEG00000016119	POC1A	99	65.880	Labrus_bergylta
ENSLACG00000018788	POC1A	92	90.881	ENSLOCG00000013801	poc1a	99	80.674	Lepisosteus_oculatus
ENSLACG00000018788	POC1A	98	64.665	ENSLAFG00000028434	POC1A	99	74.667	Loxodonta_africana
ENSLACG00000018788	POC1A	90	77.273	ENSMFAG00000001970	POC1A	100	68.844	Macaca_fascicularis
ENSLACG00000018788	POC1A	92	76.730	ENSMMUG00000012485	POC1A	100	68.349	Macaca_mulatta
ENSLACG00000018788	POC1A	90	77.273	ENSMNEG00000042811	POC1A	100	68.844	Macaca_nemestrina
ENSLACG00000018788	POC1A	92	76.730	ENSMLEG00000039574	POC1A	100	68.844	Mandrillus_leucophaeus
ENSLACG00000018788	POC1A	88	80.623	ENSMAMG00000014233	POC1A	99	65.533	Mastacembelus_armatus
ENSLACG00000018788	POC1A	91	79.365	ENSMZEG00005013503	POC1A	99	65.319	Maylandia_zebra
ENSLACG00000018788	POC1A	91	82.965	ENSMGAG00000001628	POC1A	99	68.304	Meleagris_gallopavo
ENSLACG00000018788	POC1A	98	80.858	ENSMAUG00000017403	Poc1a	99	69.374	Mesocricetus_auratus
ENSLACG00000018788	POC1A	89	80.259	ENSMICG00000002709	POC1A	100	69.108	Microcebus_murinus
ENSLACG00000018788	POC1A	89	79.870	ENSMOCG00000003396	Poc1a	100	68.317	Microtus_ochrogaster
ENSLACG00000018788	POC1A	87	79.798	ENSMMOG00000010427	poc1a	96	64.773	Mola_mola
ENSLACG00000018788	POC1A	91	80.696	ENSMODG00000011717	POC1A	96	69.849	Monodelphis_domestica
ENSLACG00000018788	POC1A	98	79.808	ENSMALG00000009054	poc1a	84	79.808	Monopterus_albus
ENSLACG00000018788	POC1A	98	80.263	MGP_CAROLIEiJ_G0032617	Poc1a	100	66.972	Mus_caroli
ENSLACG00000018788	POC1A	98	79.934	ENSMUSG00000023345	Poc1a	100	73.397	Mus_musculus
ENSLACG00000018788	POC1A	98	78.964	MGP_PahariEiJ_G0015485	Poc1a	100	66.972	Mus_pahari
ENSLACG00000018788	POC1A	98	79.934	MGP_SPRETEiJ_G0033763	Poc1a	100	66.743	Mus_spretus
ENSLACG00000018788	POC1A	88	79.085	ENSMPUG00000011723	POC1A	100	67.277	Mustela_putorius_furo
ENSLACG00000018788	POC1A	92	77.987	ENSMLUG00000015092	POC1A	91	69.535	Myotis_lucifugus
ENSLACG00000018788	POC1A	92	78.549	ENSNGAG00000005212	Poc1a	100	68.807	Nannospalax_galili
ENSLACG00000018788	POC1A	90	78.594	ENSNBRG00000022135	poc1a	98	66.511	Neolamprologus_brichardi
ENSLACG00000018788	POC1A	88	79.085	ENSNLEG00000007084	POC1A	100	68.090	Nomascus_leucogenys
ENSLACG00000018788	POC1A	83	71.875	ENSMEUG00000007715	-	79	80.769	Notamacropus_eugenii
ENSLACG00000018788	POC1A	89	78.547	ENSOPRG00000008831	POC1A	91	67.830	Ochotona_princeps
ENSLACG00000018788	POC1A	88	79.739	ENSODEG00000018290	POC1A	99	68.372	Octodon_degus
ENSLACG00000018788	POC1A	91	78.730	ENSONIG00000014378	POC1A	99	65.245	Oreochromis_niloticus
ENSLACG00000018788	POC1A	90	77.972	ENSOCUG00000002080	POC1A	100	68.672	Oryctolagus_cuniculus
ENSLACG00000018788	POC1A	90	77.564	ENSOMEG00000019834	POC1A	99	64.009	Oryzias_melastigma
ENSLACG00000018788	POC1A	92	77.673	ENSOGAG00000032245	POC1A	97	65.566	Otolemur_garnettii
ENSLACG00000018788	POC1A	98	76.331	ENSOARG00000006352	POC1A	100	69.266	Ovis_aries
ENSLACG00000018788	POC1A	88	79.739	ENSPPAG00000043583	POC1A	100	69.095	Pan_paniscus
ENSLACG00000018788	POC1A	99	75.460	ENSPPRG00000003365	POC1A	100	67.431	Panthera_pardus
ENSLACG00000018788	POC1A	83	77.273	ENSPTIG00000005388	POC1A	100	67.839	Panthera_tigris_altaica
ENSLACG00000018788	POC1A	88	79.739	ENSPTRG00000014989	POC1A	100	69.095	Pan_troglodytes
ENSLACG00000018788	POC1A	93	85.404	ENSPSIG00000014809	POC1A	91	85.404	Pelodiscus_sinensis
ENSLACG00000018788	POC1A	87	81.333	ENSPMGG00000005356	poc1a	99	67.356	Periophthalmus_magnuspinnatus
ENSLACG00000018788	POC1A	88	80.592	ENSPEMG00000024131	Poc1a	94	80.592	Peromyscus_maniculatus_bairdii
ENSLACG00000018788	POC1A	91	84.395	ENSPMAG00000000333	poc1a	98	68.341	Petromyzon_marinus
ENSLACG00000018788	POC1A	89	81.230	ENSPCIG00000018160	POC1A	99	69.767	Phascolarctos_cinereus
ENSLACG00000018788	POC1A	88	79.412	ENSPPYG00000013816	POC1A	100	68.119	Pongo_abelii
ENSLACG00000018788	POC1A	90	77.316	ENSPCAG00000002118	POC1A	99	68.140	Procavia_capensis
ENSLACG00000018788	POC1A	99	76.543	ENSPCOG00000012625	POC1A	100	69.173	Propithecus_coquereli
ENSLACG00000018788	POC1A	92	68.553	ENSPVAG00000012480	POC1A	87	68.750	Pteropus_vampyrus
ENSLACG00000018788	POC1A	92	78.864	ENSPNYG00000019517	poc1a	99	69.266	Pundamilia_nyererei
ENSLACG00000018788	POC1A	91	86.349	ENSPNAG00000007556	POC1A	98	74.483	Pygocentrus_nattereri
ENSLACG00000018788	POC1A	82	78.246	ENSRNOG00000037295	Poc1a	100	65.414	Rattus_norvegicus
ENSLACG00000018788	POC1A	92	76.730	ENSRBIG00000031748	POC1A	100	68.593	Rhinopithecus_bieti
ENSLACG00000018788	POC1A	92	76.730	ENSRROG00000044472	POC1A	100	68.593	Rhinopithecus_roxellana
ENSLACG00000018788	POC1A	98	77.316	ENSSBOG00000027902	POC1A	100	68.844	Saimiri_boliviensis_boliviensis
ENSLACG00000018788	POC1A	86	80.936	ENSSMAG00000013505	POC1A	97	66.435	Scophthalmus_maximus
ENSLACG00000018788	POC1A	90	79.167	ENSSDUG00000016161	POC1A	99	65.591	Seriola_dumerili
ENSLACG00000018788	POC1A	98	81.661	ENSSLDG00000003828	POC1A	87	81.661	Seriola_lalandi_dorsalis
ENSLACG00000018788	POC1A	89	87.018	ENSSPUG00000008656	POC1A	99	69.021	Sphenodon_punctatus
ENSLACG00000018788	POC1A	97	51.111	ENSSPAG00000020330	POC1A	95	58.469	Stegastes_partitus
ENSLACG00000018788	POC1A	92	77.044	ENSSSCG00000011426	POC1A	100	67.654	Sus_scrofa
ENSLACG00000018788	POC1A	91	80.000	ENSTGUG00000006036	POC1A	98	70.047	Taeniopygia_guttata
ENSLACG00000018788	POC1A	93	75.170	ENSTRUG00000007900	POC1A	95	75.170	Takifugu_rubripes
ENSLACG00000018788	POC1A	90	74.121	ENSTNIG00000014818	POC1A	99	60.625	Tetraodon_nigroviridis
ENSLACG00000018788	POC1A	92	76.101	ENSTTRG00000016798	POC1A	100	66.055	Tursiops_truncatus
ENSLACG00000018788	POC1A	88	78.758	ENSUAMG00000020816	POC1A	91	79.562	Ursus_americanus
ENSLACG00000018788	POC1A	91	67.588	ENSUMAG00000021482	POC1A	100	67.588	Ursus_maritimus
ENSLACG00000018788	POC1A	90	82.903	ENSXETG00000010813	poc1a	98	68.764	Xenopus_tropicalis