EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018793 (Gene tree)
Gene ID: 102364067
Gene Symbol: RAN
Alias: ARA24|Gsp1|TC4
Full Name: RAN%2C member RAS oncogene family
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 8644 bases
Position: chrJH126570.1:4550643-4559286
Accession: 102364067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021390	MMR_HSR1	PF01926.23	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021531	RAN-201	2310	XM_005987179	ENSLACP00000021390	147 (aa)	XP_005987241	H3BHL9

Gene Model

Click here to download ENSLACG00000018793's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018793	RAN	96	34.247	ENSLACG00000016974	RAB11B	84	34.247
ENSLACG00000018793	RAN	88	31.298	ENSLACG00000022111	-	66	31.298
ENSLACG00000018793	RAN	93	32.847	ENSLACG00000003722	rabl2	61	32.847
ENSLACG00000018793	RAN	74	33.945	ENSLACG00000004025	RAB23	52	35.484
ENSLACG00000018793	RAN	88	34.615	ENSLACG00000012869	RAB1A	63	34.615
ENSLACG00000018793	RAN	88	36.296	ENSLACG00000002523	RAB29	66	36.296
ENSLACG00000018793	RAN	86	34.091	ENSLACG00000017891	RAB9B	62	34.091
ENSLACG00000018793	RAN	50	35.065	ENSLACG00000010042	-	56	33.613
ENSLACG00000018793	RAN	86	35.156	ENSLACG00000006407	RAB30	63	35.156
ENSLACG00000018793	RAN	84	30.400	ENSLACG00000013980	rab41	59	30.400
ENSLACG00000018793	RAN	83	37.398	ENSLACG00000004663	RAB5A	57	37.398
ENSLACG00000018793	RAN	82	30.645	ENSLACG00000016074	RAB39B	58	30.645
ENSLACG00000018793	RAN	80	30.000	ENSLACG00000012755	-	57	30.000
ENSLACG00000018793	RAN	84	32.283	ENSLACG00000013571	RAB33B	55	32.283
ENSLACG00000018793	RAN	90	35.036	ENSLACG00000015770	RAB7A	66	35.036
ENSLACG00000018793	RAN	91	31.387	ENSLACG00000012521	RAB2A	65	31.387
ENSLACG00000018793	RAN	91	34.307	ENSLACG00000009310	rab18a	67	34.307
ENSLACG00000018793	RAN	50	30.263	ENSLACG00000010885	-	50	30.263
ENSLACG00000018793	RAN	82	37.190	ENSLACG00000011380	rab11al	56	37.190
ENSLACG00000018793	RAN	88	31.579	ENSLACG00000012674	si:dkey-34d22.5	63	31.579
ENSLACG00000018793	RAN	91	31.387	ENSLACG00000014446	RAB2B	83	31.387
ENSLACG00000018793	RAN	82	34.711	ENSLACG00000018444	RAB35	60	34.711
ENSLACG00000018793	RAN	87	31.818	ENSLACG00000011181	RAB14	61	31.818
ENSLACG00000018793	RAN	93	34.286	ENSLACG00000016857	-	64	34.286
ENSLACG00000018793	RAN	89	35.821	ENSLACG00000011256	rab18b	65	35.821
ENSLACG00000018793	RAN	82	33.607	ENSLACG00000007092	RAB22A	63	33.607
ENSLACG00000018793	RAN	96	34.247	ENSLACG00000011157	RAB25	68	34.247
ENSLACG00000018793	RAN	86	33.846	ENSLACG00000011557	zgc:101559	56	33.846
ENSLACG00000018793	RAN	88	35.385	ENSLACG00000012717	RAB1B	64	36.434
ENSLACG00000018793	RAN	82	32.540	ENSLACG00000008103	-	71	32.540
ENSLACG00000018793	RAN	82	36.364	ENSLACG00000012184	RAB11A	56	36.364
ENSLACG00000018793	RAN	90	32.847	ENSLACG00000008809	zgc:100918	67	32.847
ENSLACG00000018793	RAN	84	31.200	ENSLACG00000011001	RAB20	50	31.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018793	RAN	97	96.479	ENSG00000132341	RAN	70	95.833	Homo_sapiens
ENSLACG00000018793	RAN	97	91.549	ENSBTAG00000024233	-	66	91.549	Bos_taurus
ENSLACG00000018793	RAN	97	88.732	ENSCAFG00020003142	-	66	88.732	Canis_lupus_dingo
ENSLACG00000018793	RAN	97	80.986	ENSCHIG00000025632	-	62	80.986	Capra_hircus
ENSLACG00000018793	RAN	96	97.872	ENSCSAG00000001906	-	93	97.872	Chlorocebus_sabaeus
ENSLACG00000018793	RAN	93	89.051	ENSCING00000003944	-	88	87.234	Ciona_intestinalis
ENSLACG00000018793	RAN	97	96.479	ENSCANG00000004264	-	66	96.479	Colobus_angolensis_palliatus
ENSLACG00000018793	RAN	97	92.958	ENSCGRG00001009212	-	66	92.958	Cricetulus_griseus_chok1gshd
ENSLACG00000018793	RAN	97	83.803	ENSCGRG00000007401	-	64	83.803	Cricetulus_griseus_crigri
ENSLACG00000018793	RAN	97	92.958	ENSCGRG00000019639	Rasl2-9	66	92.958	Cricetulus_griseus_crigri
ENSLACG00000018793	RAN	97	86.620	ENSDNOG00000031679	-	63	86.620	Dasypus_novemcinctus
ENSLACG00000018793	RAN	71	88.462	ENSETEG00000010467	-	95	88.462	Echinops_telfairi
ENSLACG00000018793	RAN	94	95.652	ENSHCOG00000009757	ran	64	95.652	Hippocampus_comes
ENSLACG00000018793	RAN	97	92.254	ENSMAUG00000015974	-	66	92.254	Mesocricetus_auratus
ENSLACG00000018793	RAN	97	89.542	ENSMICG00000000653	-	67	89.542	Microcebus_murinus
ENSLACG00000018793	RAN	97	89.437	ENSMUSG00000083649	Rasl2-9	66	89.437	Mus_musculus
ENSLACG00000018793	RAN	97	89.437	MGP_SPRETEiJ_G0030206	Rasl2-9	66	89.437	Mus_spretus
ENSLACG00000018793	RAN	97	96.479	MGP_SPRETEiJ_G0028777	-	77	96.479	Mus_spretus
ENSLACG00000018793	RAN	95	95.000	ENSNGAG00000016204	-	77	95.000	Nannospalax_galili
ENSLACG00000018793	RAN	93	93.382	ENSPMGG00000008616	ran	66	93.382	Periophthalmus_magnuspinnatus
ENSLACG00000018793	RAN	95	95.000	ENSPEMG00000010658	-	66	95.000	Peromyscus_maniculatus_bairdii
ENSLACG00000018793	RAN	95	97.122	ENSRBIG00000037389	-	70	97.122	Rhinopithecus_bieti
ENSLACG00000018793	RAN	95	97.842	ENSRROG00000044174	-	70	97.842	Rhinopithecus_roxellana
ENSLACG00000018793	RAN	98	94.444	ENSTRUG00000013749	ran	67	94.444	Takifugu_rubripes
ENSLACG00000018793	RAN	98	94.444	ENSTNIG00000013137	ran	67	94.444	Tetraodon_nigroviridis