EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000018820 (Gene tree)
Gene ID: 102356958
Gene Symbol: cpne1
Alias: cpne3|cpne3l|wu:fb69d07|wu:fc45a04
Full Name: copine 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 99437 bases
Position: chrJH126566.1:4759504-4858940
Accession: 102356958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021420	RRM_1	PF00076.22	5.1e-34	1	4
ENSLACP00000021420	RRM_1	PF00076.22	5.1e-34	2	4
ENSLACP00000021420	RRM_1	PF00076.22	5.1e-34	3	4
ENSLACP00000021420	RRM_1	PF00076.22	5.1e-34	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021560	-	5932	XM_005986723	ENSLACP00000021419	532 (aa)	XP_005986785	H3BHP8
ENSLACT00000021561	-	4476	XM_005986720	ENSLACP00000021420	1492 (aa)	-	H3BHP9
ENSLACT00000026592	-	5792	XM_005986724	ENSLACP00000023221	532 (aa)	XP_005986786	H3BHP8

Gene Model

Click here to download ENSLACG00000018820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018820	cpne1	99	65.955	ENSOARG00000014537	CPNE1	51	62.619	Ovis_aries
ENSLACG00000018820	cpne1	53	70.157	ENSPKIG00000017408	cpne1	99	70.436	Paramormyrops_kingsleyae