EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000018888 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 639 bases
Position: chrJH126571.1:5134150-5134788
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021494	PARP	PF00644.20	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021635	-	639	-	ENSLACP00000021494	212 (aa)	-	H3BHX3

Gene Model

Click here to download ENSLACG00000018888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000018888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000018888	-	99	48.372	ENSLACG00000015882	gig2p	100	48.372
ENSLACG00000018888	-	67	63.087	ENSLACG00000015833	-	93	63.087
ENSLACG00000018888	-	58	52.713	ENSLACG00000000239	-	85	51.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000018888	-	73	48.171	ENSAPOG00000002358	gig2p	91	48.171	Acanthochromis_polyacanthus
ENSLACG00000018888	-	54	50.420	ENSAPOG00000010190	gig2h	77	50.420	Acanthochromis_polyacanthus
ENSLACG00000018888	-	52	55.263	ENSACIG00000009062	-	80	55.263	Amphilophus_citrinellus
ENSLACG00000018888	-	93	45.238	ENSACIG00000006934	gig2p	100	45.238	Amphilophus_citrinellus
ENSLACG00000018888	-	55	56.667	ENSACIG00000023385	-	76	56.667	Amphilophus_citrinellus
ENSLACG00000018888	-	53	54.310	ENSACIG00000018452	-	75	54.310	Amphilophus_citrinellus
ENSLACG00000018888	-	65	50.350	ENSACIG00000006917	-	85	50.350	Amphilophus_citrinellus
ENSLACG00000018888	-	95	42.857	ENSAOCG00000003416	gig2p	95	42.857	Amphiprion_ocellaris
ENSLACG00000018888	-	57	50.820	ENSAOCG00000010944	-	69	50.820	Amphiprion_ocellaris
ENSLACG00000018888	-	95	41.935	ENSAPEG00000017256	gig2p	95	41.935	Amphiprion_percula
ENSLACG00000018888	-	69	53.595	ENSATEG00000003204	gig2p	96	53.595	Anabas_testudineus
ENSLACG00000018888	-	89	44.949	ENSATEG00000003229	gig2p	97	44.949	Anabas_testudineus
ENSLACG00000018888	-	69	44.444	ENSATEG00000003163	gig2p	95	44.444	Anabas_testudineus
ENSLACG00000018888	-	65	50.000	ENSATEG00000003250	gig2p	70	50.000	Anabas_testudineus
ENSLACG00000018888	-	52	52.174	ENSACLG00000019044	gig2g	80	52.174	Astatotilapia_calliptera
ENSLACG00000018888	-	67	49.020	ENSACLG00000006461	-	69	49.020	Astatotilapia_calliptera
ENSLACG00000018888	-	99	54.286	ENSAMXG00000026111	-	99	54.286	Astyanax_mexicanus
ENSLACG00000018888	-	58	50.794	ENSAMXG00000026110	gig2d	84	50.794	Astyanax_mexicanus
ENSLACG00000018888	-	56	49.180	ENSAMXG00000041087	-	81	49.180	Astyanax_mexicanus
ENSLACG00000018888	-	98	49.065	ENSAMXG00000025547	gig2o	98	49.065	Astyanax_mexicanus
ENSLACG00000018888	-	60	49.242	ENSAMXG00000032512	gig2d	85	49.242	Astyanax_mexicanus
ENSLACG00000018888	-	98	43.458	ENSAMXG00000025187	gig2p	98	43.458	Astyanax_mexicanus
ENSLACG00000018888	-	50	59.821	ENSAMXG00000030672	-	77	59.821	Astyanax_mexicanus
ENSLACG00000018888	-	58	51.938	ENSAMXG00000016000	-	83	51.938	Astyanax_mexicanus
ENSLACG00000018888	-	69	53.333	ENSAMXG00000004144	-	86	53.333	Astyanax_mexicanus
ENSLACG00000018888	-	56	54.098	ENSAMXG00000043196	-	86	54.098	Astyanax_mexicanus
ENSLACG00000018888	-	58	47.656	ENSAMXG00000026038	-	90	47.656	Astyanax_mexicanus
ENSLACG00000018888	-	59	52.672	ENSCVAG00000006821	gig2p	78	52.672	Cyprinodon_variegatus
ENSLACG00000018888	-	52	50.877	ENSCVAG00000003734	-	84	50.877	Cyprinodon_variegatus
ENSLACG00000018888	-	55	48.760	ENSCVAG00000003718	-	80	48.760	Cyprinodon_variegatus
ENSLACG00000018888	-	69	50.000	ENSCVAG00000006837	gig2p	75	50.000	Cyprinodon_variegatus
ENSLACG00000018888	-	97	46.226	ENSDARG00000088260	gig2p	96	46.226	Danio_rerio
ENSLACG00000018888	-	100	47.032	ENSDARG00000086903	gig2o	97	47.032	Danio_rerio
ENSLACG00000018888	-	75	55.469	ENSDARG00000075757	gig2e	93	55.469	Danio_rerio
ENSLACG00000018888	-	62	51.111	ENSDARG00000099735	gig2f	86	51.111	Danio_rerio
ENSLACG00000018888	-	56	50.820	ENSDARG00000098463	gig2g	79	50.820	Danio_rerio
ENSLACG00000018888	-	60	49.242	ENSDARG00000099325	gig2i	84	49.242	Danio_rerio
ENSLACG00000018888	-	58	50.000	ENSDARG00000098772	gig2d	84	50.000	Danio_rerio
ENSLACG00000018888	-	59	47.692	ENSDARG00000069769	gig2j	84	47.692	Danio_rerio
ENSLACG00000018888	-	58	49.206	ENSDARG00000091730	gig2l	100	53.097	Danio_rerio
ENSLACG00000018888	-	56	50.820	ENSDARG00000103444	gig2h	79	50.820	Danio_rerio
ENSLACG00000018888	-	99	38.839	ENSELUG00000017477	gig2p	68	38.839	Esox_lucius
ENSLACG00000018888	-	98	47.442	ENSELUG00000017166	gig2o	99	47.442	Esox_lucius
ENSLACG00000018888	-	98	40.909	ENSFHEG00000017724	gig2p	99	41.256	Fundulus_heteroclitus
ENSLACG00000018888	-	99	42.342	ENSFHEG00000017712	-	91	42.342	Fundulus_heteroclitus
ENSLACG00000018888	-	69	48.408	ENSGAFG00000009440	gig2p	96	48.408	Gambusia_affinis
ENSLACG00000018888	-	65	51.020	ENSGAFG00000009453	gig2p	95	51.020	Gambusia_affinis
ENSLACG00000018888	-	52	53.913	ENSHBUG00000019410	-	82	53.913	Haplochromis_burtoni
ENSLACG00000018888	-	65	51.020	ENSHBUG00000010491	gig2p	66	51.020	Haplochromis_burtoni
ENSLACG00000018888	-	55	55.000	ENSHBUG00000018939	-	81	55.000	Haplochromis_burtoni
ENSLACG00000018888	-	74	48.503	ENSHBUG00000010473	-	95	48.503	Haplochromis_burtoni
ENSLACG00000018888	-	99	57.346	ENSIPUG00000001531	-	100	57.346	Ictalurus_punctatus
ENSLACG00000018888	-	60	54.918	ENSIPUG00000001510	-	89	54.098	Ictalurus_punctatus
ENSLACG00000018888	-	97	46.009	ENSIPUG00000009280	gig2o	85	46.009	Ictalurus_punctatus
ENSLACG00000018888	-	99	45.622	ENSIPUG00000022554	gig2p	99	45.622	Ictalurus_punctatus
ENSLACG00000018888	-	58	51.880	ENSIPUG00000000101	-	89	51.880	Ictalurus_punctatus
ENSLACG00000018888	-	53	52.586	ENSIPUG00000007003	-	87	52.586	Ictalurus_punctatus
ENSLACG00000018888	-	54	51.261	ENSIPUG00000005433	-	73	51.261	Ictalurus_punctatus
ENSLACG00000018888	-	57	49.219	ENSIPUG00000007035	-	77	49.219	Ictalurus_punctatus
ENSLACG00000018888	-	98	43.182	ENSKMAG00000007923	-	97	43.182	Kryptolebias_marmoratus
ENSLACG00000018888	-	94	42.273	ENSKMAG00000007907	gig2p	99	41.704	Kryptolebias_marmoratus
ENSLACG00000018888	-	97	44.700	ENSLBEG00000018765	-	98	44.700	Labrus_bergylta
ENSLACG00000018888	-	92	42.180	ENSLBEG00000018778	gig2p	100	42.180	Labrus_bergylta
ENSLACG00000018888	-	98	57.692	ENSLOCG00000005879	-	100	57.692	Lepisosteus_oculatus
ENSLACG00000018888	-	59	54.615	ENSLOCG00000005897	gig2e	56	54.615	Lepisosteus_oculatus
ENSLACG00000018888	-	98	43.836	ENSMAMG00000011285	gig2p	98	43.836	Mastacembelus_armatus
ENSLACG00000018888	-	99	43.891	ENSMZEG00005013815	-	95	43.891	Maylandia_zebra
ENSLACG00000018888	-	99	40.724	ENSMMOG00000005594	gig2p	98	41.704	Mola_mola
ENSLACG00000018888	-	89	43.878	ENSMMOG00000005597	-	89	43.878	Mola_mola
ENSLACG00000018888	-	98	44.495	ENSMALG00000008417	gig2p	97	44.495	Monopterus_albus
ENSLACG00000018888	-	67	53.333	ENSNBRG00000000843	gig2p	76	53.333	Neolamprologus_brichardi
ENSLACG00000018888	-	74	51.497	ENSNBRG00000000872	-	95	51.497	Neolamprologus_brichardi
ENSLACG00000018888	-	56	52.846	ENSNBRG00000009062	-	76	52.846	Neolamprologus_brichardi
ENSLACG00000018888	-	58	48.092	ENSNBRG00000009049	-	82	48.092	Neolamprologus_brichardi
ENSLACG00000018888	-	76	51.351	ENSONIG00000011824	gig2p	97	51.351	Oreochromis_niloticus
ENSLACG00000018888	-	57	52.419	ENSONIG00000009460	gig2h	89	52.419	Oreochromis_niloticus
ENSLACG00000018888	-	67	44.521	ENSORLG00000027961	-	58	36.139	Oryzias_latipes
ENSLACG00000018888	-	98	44.495	ENSORLG00000010287	gig2p	98	44.495	Oryzias_latipes
ENSLACG00000018888	-	90	45.455	ENSORLG00000028073	-	95	45.455	Oryzias_latipes
ENSLACG00000018888	-	54	55.000	ENSORLG00020008444	-	70	52.308	Oryzias_latipes_hni
ENSLACG00000018888	-	67	50.667	ENSORLG00020008422	gig2p	96	50.667	Oryzias_latipes_hni
ENSLACG00000018888	-	90	44.949	ENSORLG00015022642	-	95	44.949	Oryzias_latipes_hsok
ENSLACG00000018888	-	67	48.201	ENSORLG00015008571	gig2g	93	48.201	Oryzias_latipes_hsok
ENSLACG00000018888	-	57	53.175	ENSORLG00015022600	gig2p	92	53.175	Oryzias_latipes_hsok
ENSLACG00000018888	-	64	45.714	ENSOMEG00000015239	-	89	45.714	Oryzias_melastigma
ENSLACG00000018888	-	59	52.273	ENSOMEG00000007340	-	75	52.273	Oryzias_melastigma
ENSLACG00000018888	-	62	49.630	ENSOMEG00000013250	-	78	49.630	Oryzias_melastigma
ENSLACG00000018888	-	54	49.580	ENSOMEG00000015253	-	80	49.580	Oryzias_melastigma
ENSLACG00000018888	-	61	47.761	ENSOMEG00000013589	-	78	47.761	Oryzias_melastigma
ENSLACG00000018888	-	53	56.410	ENSPKIG00000000878	-	89	56.410	Paramormyrops_kingsleyae
ENSLACG00000018888	-	57	51.938	ENSPKIG00000000863	-	79	51.938	Paramormyrops_kingsleyae
ENSLACG00000018888	-	54	55.000	ENSPKIG00000014390	-	90	55.000	Paramormyrops_kingsleyae
ENSLACG00000018888	-	50	58.036	ENSPKIG00000000927	-	63	58.036	Paramormyrops_kingsleyae
ENSLACG00000018888	-	54	52.500	ENSPKIG00000014377	-	90	52.500	Paramormyrops_kingsleyae
ENSLACG00000018888	-	54	52.941	ENSPKIG00000003192	-	74	52.941	Paramormyrops_kingsleyae
ENSLACG00000018888	-	50	58.036	ENSPKIG00000001665	-	76	58.036	Paramormyrops_kingsleyae
ENSLACG00000018888	-	67	54.701	ENSPMAG00000005660	-	93	54.701	Petromyzon_marinus
ENSLACG00000018888	-	63	48.905	ENSPMAG00000010332	-	88	48.905	Petromyzon_marinus
ENSLACG00000018888	-	99	43.243	ENSPFOG00000006191	gig2p	98	50.340	Poecilia_formosa
ENSLACG00000018888	-	62	54.098	ENSPFOG00000005274	gig2g	95	54.098	Poecilia_formosa
ENSLACG00000018888	-	55	52.893	ENSPMEG00000007652	gig2h	74	54.237	Poecilia_mexicana
ENSLACG00000018888	-	94	43.602	ENSPMEG00000018196	-	94	43.602	Poecilia_mexicana
ENSLACG00000018888	-	98	42.727	ENSPMEG00000018167	gig2p	99	42.727	Poecilia_mexicana
ENSLACG00000018888	-	72	50.943	ENSPREG00000005283	gig2p	95	50.943	Poecilia_reticulata
ENSLACG00000018888	-	85	44.974	ENSPREG00000005273	-	87	44.974	Poecilia_reticulata
ENSLACG00000018888	-	56	53.279	ENSPNYG00000009627	-	69	53.279	Pundamilia_nyererei
ENSLACG00000018888	-	65	51.020	ENSPNYG00000021226	gig2p	66	51.020	Pundamilia_nyererei
ENSLACG00000018888	-	64	53.719	ENSPNYG00000009654	-	96	53.719	Pundamilia_nyererei
ENSLACG00000018888	-	67	50.980	ENSPNYG00000021214	-	86	50.980	Pundamilia_nyererei
ENSLACG00000018888	-	57	52.800	ENSPNAG00000015811	gig2d	83	52.800	Pygocentrus_nattereri
ENSLACG00000018888	-	53	52.991	ENSPNAG00000026625	-	84	52.991	Pygocentrus_nattereri
ENSLACG00000018888	-	55	52.893	ENSPNAG00000015845	gig2d	80	52.893	Pygocentrus_nattereri
ENSLACG00000018888	-	96	49.761	ENSPNAG00000012118	gig2o	97	49.761	Pygocentrus_nattereri
ENSLACG00000018888	-	56	49.194	ENSPNAG00000026634	-	94	49.194	Pygocentrus_nattereri
ENSLACG00000018888	-	53	51.282	ENSPNAG00000021255	-	75	51.282	Pygocentrus_nattereri
ENSLACG00000018888	-	99	59.048	ENSPNAG00000015816	-	99	59.048	Pygocentrus_nattereri
ENSLACG00000018888	-	98	45.794	ENSPNAG00000014831	gig2p	99	45.794	Pygocentrus_nattereri
ENSLACG00000018888	-	55	55.372	ENSSFOG00015005869	-	57	55.372	Scleropages_formosus
ENSLACG00000018888	-	57	52.000	ENSSFOG00015005876	-	79	52.000	Scleropages_formosus
ENSLACG00000018888	-	98	45.070	ENSSFOG00015009887	gig2p	97	45.070	Scleropages_formosus
ENSLACG00000018888	-	99	51.152	ENSSFOG00015007829	gig2o	97	51.152	Scleropages_formosus
ENSLACG00000018888	-	58	56.034	ENSSFOG00015005900	-	89	56.034	Scleropages_formosus
ENSLACG00000018888	-	98	58.654	ENSSFOG00015005862	-	99	59.135	Scleropages_formosus
ENSLACG00000018888	-	98	41.964	ENSSMAG00000008317	gig2p	98	41.964	Scophthalmus_maximus
ENSLACG00000018888	-	97	39.726	ENSSMAG00000008329	-	97	40.183	Scophthalmus_maximus
ENSLACG00000018888	-	91	44.279	ENSSDUG00000018069	gig2p	93	44.279	Seriola_dumerili
ENSLACG00000018888	-	65	51.370	ENSSDUG00000018079	-	87	51.370	Seriola_dumerili
ENSLACG00000018888	-	98	42.922	ENSSLDG00000018358	gig2p	96	42.922	Seriola_lalandi_dorsalis
ENSLACG00000018888	-	67	48.667	ENSSPAG00000005252	gig2p	78	48.667	Stegastes_partitus
ENSLACG00000018888	-	91	44.724	ENSTRUG00000023008	gig2p	92	44.724	Takifugu_rubripes
ENSLACG00000018888	-	67	51.938	ENSXETG00000032410	-	91	49.630	Xenopus_tropicalis
ENSLACG00000018888	-	99	40.991	ENSXMAG00000019444	-	99	40.991	Xiphophorus_maculatus