EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000019024 (Gene tree)
Gene ID: 102349500
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 30560 bases
Position: chrJH126565.1:6484560-6515119
Accession: 102349500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021652	Beta-Casp	PF10996.8	3.7e-19	1	1
ENSLACP00000021652	Lactamase_B	PF00753.27	1.3e-06	1	1
ENSLACP00000021652	RMMBL	PF07521.12	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021793	CPSF2-201	3663	XM_005986596	ENSLACP00000021652	782 (aa)	XP_005986658	H3BID1

Gene Model

Click here to download ENSLACG00000019024's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000019024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000019024	CPSF2	100	89.911	ENSG00000165934	CPSF2	100	89.655	Homo_sapiens
ENSLACG00000019024	CPSF2	100	84.157	ENSAPOG00000001242	cpsf2	100	83.883	Acanthochromis_polyacanthus
ENSLACG00000019024	CPSF2	100	84.557	ENSACIG00000009331	cpsf2	100	84.411	Amphilophus_citrinellus
ENSLACG00000019024	CPSF2	100	84.157	ENSAOCG00000014095	cpsf2	100	84.010	Amphiprion_ocellaris
ENSLACG00000019024	CPSF2	100	84.157	ENSAPEG00000009158	cpsf2	100	84.010	Amphiprion_percula
ENSLACG00000019024	CPSF2	96	85.132	ENSATEG00000017644	cpsf2	100	83.445	Anabas_testudineus
ENSLACG00000019024	CPSF2	100	90.689	ENSAPLG00000006330	CPSF2	100	90.689	Anas_platyrhynchos
ENSLACG00000019024	CPSF2	100	90.805	ENSACAG00000009245	CPSF2	100	90.166	Anolis_carolinensis
ENSLACG00000019024	CPSF2	100	89.911	ENSANAG00000022915	CPSF2	100	89.655	Aotus_nancymaae
ENSLACG00000019024	CPSF2	100	85.006	ENSAMXG00000018696	cpsf2	100	84.625	Astyanax_mexicanus
ENSLACG00000019024	CPSF2	100	90.166	ENSBTAG00000010227	CPSF2	100	89.655	Bos_taurus
ENSLACG00000019024	CPSF2	100	41.725	WBGene00017313	cpsf-2	79	45.455	Caenorhabditis_elegans
ENSLACG00000019024	CPSF2	100	89.911	ENSCJAG00000018069	CPSF2	100	89.655	Callithrix_jacchus
ENSLACG00000019024	CPSF2	100	90.038	ENSCAFG00000010909	CPSF2	100	89.783	Canis_familiaris
ENSLACG00000019024	CPSF2	100	90.038	ENSCAFG00020020670	CPSF2	100	89.783	Canis_lupus_dingo
ENSLACG00000019024	CPSF2	100	90.166	ENSCHIG00000023848	CPSF2	100	89.655	Capra_hircus
ENSLACG00000019024	CPSF2	100	89.655	ENSTSYG00000009036	CPSF2	100	89.400	Carlito_syrichta
ENSLACG00000019024	CPSF2	100	90.038	ENSCPOG00000010899	CPSF2	100	89.527	Cavia_porcellus
ENSLACG00000019024	CPSF2	100	89.911	ENSCCAG00000028088	CPSF2	100	89.655	Cebus_capucinus
ENSLACG00000019024	CPSF2	100	90.038	ENSCATG00000030132	CPSF2	100	89.527	Cercocebus_atys
ENSLACG00000019024	CPSF2	100	89.911	ENSCLAG00000012404	CPSF2	100	89.400	Chinchilla_lanigera
ENSLACG00000019024	CPSF2	100	90.038	ENSCSAG00000011300	CPSF2	100	89.527	Chlorocebus_sabaeus
ENSLACG00000019024	CPSF2	100	83.653	ENSCHOG00000012904	CPSF2	100	83.397	Choloepus_hoffmanni
ENSLACG00000019024	CPSF2	100	90.421	ENSCPBG00000008766	CPSF2	97	89.655	Chrysemys_picta_bellii
ENSLACG00000019024	CPSF2	100	55.112	ENSCING00000007881	-	100	54.364	Ciona_intestinalis
ENSLACG00000019024	CPSF2	94	90.314	ENSCANG00000041651	CPSF2	100	90.041	Colobus_angolensis_palliatus
ENSLACG00000019024	CPSF2	100	89.911	ENSCGRG00001006901	Cpsf2	100	89.655	Cricetulus_griseus_chok1gshd
ENSLACG00000019024	CPSF2	100	89.911	ENSCGRG00000012416	Cpsf2	100	89.655	Cricetulus_griseus_crigri
ENSLACG00000019024	CPSF2	100	82.636	ENSCSEG00000004116	cpsf2	100	82.256	Cynoglossus_semilaevis
ENSLACG00000019024	CPSF2	100	83.629	ENSCVAG00000000095	cpsf2	100	83.629	Cyprinodon_variegatus
ENSLACG00000019024	CPSF2	100	83.565	ENSDARG00000028971	cpsf2	100	83.186	Danio_rerio
ENSLACG00000019024	CPSF2	100	90.038	ENSDNOG00000042757	CPSF2	100	89.783	Dasypus_novemcinctus
ENSLACG00000019024	CPSF2	100	90.166	ENSDORG00000013709	Cpsf2	100	89.911	Dipodomys_ordii
ENSLACG00000019024	CPSF2	100	52.750	FBgn0027873	Cpsf100	100	52.750	Drosophila_melanogaster
ENSLACG00000019024	CPSF2	100	81.378	ENSETEG00000012123	CPSF2	100	81.122	Echinops_telfairi
ENSLACG00000019024	CPSF2	52	76.716	ENSEBUG00000012098	cpsf2	93	76.716	Eptatretus_burgeri
ENSLACG00000019024	CPSF2	89	91.809	ENSEASG00005021193	CPSF2	100	91.809	Equus_asinus_asinus
ENSLACG00000019024	CPSF2	100	90.038	ENSECAG00000023935	CPSF2	100	89.527	Equus_caballus
ENSLACG00000019024	CPSF2	100	83.438	ENSELUG00000008442	cpsf2	100	82.434	Esox_lucius
ENSLACG00000019024	CPSF2	100	90.038	ENSFCAG00000007886	CPSF2	100	89.527	Felis_catus
ENSLACG00000019024	CPSF2	100	90.921	ENSFALG00000002412	CPSF2	100	90.921	Ficedula_albicollis
ENSLACG00000019024	CPSF2	100	89.911	ENSFDAG00000006327	CPSF2	100	89.400	Fukomys_damarensis
ENSLACG00000019024	CPSF2	96	83.029	ENSFHEG00000015465	cpsf2	98	83.029	Fundulus_heteroclitus
ENSLACG00000019024	CPSF2	100	82.174	ENSGMOG00000008761	cpsf2	100	82.174	Gadus_morhua
ENSLACG00000019024	CPSF2	100	91.432	ENSGALG00000010783	CPSF2	100	91.432	Gallus_gallus
ENSLACG00000019024	CPSF2	100	83.650	ENSGAFG00000001407	cpsf2	100	83.376	Gambusia_affinis
ENSLACG00000019024	CPSF2	100	83.904	ENSGACG00000008418	cpsf2	100	83.503	Gasterosteus_aculeatus
ENSLACG00000019024	CPSF2	100	90.294	ENSGAGG00000008287	CPSF2	100	89.527	Gopherus_agassizii
ENSLACG00000019024	CPSF2	100	89.911	ENSGGOG00000011799	CPSF2	100	89.655	Gorilla_gorilla
ENSLACG00000019024	CPSF2	100	84.137	ENSHBUG00000023466	cpsf2	100	84.137	Haplochromis_burtoni
ENSLACG00000019024	CPSF2	100	89.783	ENSHGLG00000018311	CPSF2	100	89.527	Heterocephalus_glaber_female
ENSLACG00000019024	CPSF2	100	89.783	ENSHGLG00100016460	CPSF2	100	89.527	Heterocephalus_glaber_male
ENSLACG00000019024	CPSF2	100	83.122	ENSHCOG00000019527	cpsf2	98	83.122	Hippocampus_comes
ENSLACG00000019024	CPSF2	100	84.498	ENSIPUG00000020857	cpsf2	100	83.863	Ictalurus_punctatus
ENSLACG00000019024	CPSF2	100	89.911	ENSSTOG00000009528	CPSF2	100	89.655	Ictidomys_tridecemlineatus
ENSLACG00000019024	CPSF2	100	90.166	ENSJJAG00000017925	Cpsf2	100	89.911	Jaculus_jaculus
ENSLACG00000019024	CPSF2	100	83.523	ENSKMAG00000019429	cpsf2	100	83.249	Kryptolebias_marmoratus
ENSLACG00000019024	CPSF2	95	82.865	ENSLBEG00000011585	cpsf2	100	82.865	Labrus_bergylta
ENSLACG00000019024	CPSF2	100	86.058	ENSLOCG00000014102	cpsf2	100	85.678	Lepisosteus_oculatus
ENSLACG00000019024	CPSF2	100	89.682	ENSLAFG00000004891	CPSF2	100	89.427	Loxodonta_africana
ENSLACG00000019024	CPSF2	100	90.038	ENSMFAG00000041212	CPSF2	100	89.527	Macaca_fascicularis
ENSLACG00000019024	CPSF2	100	90.038	ENSMMUG00000000699	CPSF2	100	89.527	Macaca_mulatta
ENSLACG00000019024	CPSF2	100	90.038	ENSMNEG00000031584	CPSF2	100	89.527	Macaca_nemestrina
ENSLACG00000019024	CPSF2	100	90.038	ENSMLEG00000029394	CPSF2	100	89.527	Mandrillus_leucophaeus
ENSLACG00000019024	CPSF2	100	84.537	ENSMAMG00000004235	cpsf2	100	84.137	Mastacembelus_armatus
ENSLACG00000019024	CPSF2	100	84.284	ENSMZEG00005001769	cpsf2	100	84.137	Maylandia_zebra
ENSLACG00000019024	CPSF2	100	91.188	ENSMGAG00000013122	CPSF2	100	91.188	Meleagris_gallopavo
ENSLACG00000019024	CPSF2	100	89.783	ENSMAUG00000015160	Cpsf2	100	89.527	Mesocricetus_auratus
ENSLACG00000019024	CPSF2	100	90.038	ENSMICG00000016441	CPSF2	100	89.527	Microcebus_murinus
ENSLACG00000019024	CPSF2	100	89.911	ENSMOCG00000015372	Cpsf2	100	89.400	Microtus_ochrogaster
ENSLACG00000019024	CPSF2	100	79.949	ENSMMOG00000015590	cpsf2	100	79.188	Mola_mola
ENSLACG00000019024	CPSF2	100	90.166	ENSMODG00000002042	CPSF2	100	89.655	Monodelphis_domestica
ENSLACG00000019024	CPSF2	100	81.622	ENSMALG00000022275	cpsf2	100	81.218	Monopterus_albus
ENSLACG00000019024	CPSF2	100	89.527	ENSMUSG00000041781	Cpsf2	100	89.272	Mus_musculus
ENSLACG00000019024	CPSF2	100	89.655	MGP_PahariEiJ_G0029791	Cpsf2	100	89.400	Mus_pahari
ENSLACG00000019024	CPSF2	100	89.527	MGP_SPRETEiJ_G0018877	Cpsf2	100	89.272	Mus_spretus
ENSLACG00000019024	CPSF2	100	90.166	ENSMPUG00000007617	CPSF2	98	89.655	Mustela_putorius_furo
ENSLACG00000019024	CPSF2	100	90.294	ENSMLUG00000005570	CPSF2	100	89.783	Myotis_lucifugus
ENSLACG00000019024	CPSF2	100	90.166	ENSNGAG00000020312	Cpsf2	100	89.911	Nannospalax_galili
ENSLACG00000019024	CPSF2	100	84.537	ENSNBRG00000022402	cpsf2	100	84.391	Neolamprologus_brichardi
ENSLACG00000019024	CPSF2	100	89.017	ENSNLEG00000017132	CPSF2	100	88.761	Nomascus_leucogenys
ENSLACG00000019024	CPSF2	91	94.822	ENSMEUG00000008138	CPSF2	91	94.822	Notamacropus_eugenii
ENSLACG00000019024	CPSF2	94	84.973	ENSOPRG00000008484	-	91	93.255	Ochotona_princeps
ENSLACG00000019024	CPSF2	100	89.783	ENSODEG00000008682	CPSF2	100	89.527	Octodon_degus
ENSLACG00000019024	CPSF2	100	84.411	ENSONIG00000005901	cpsf2	100	84.264	Oreochromis_niloticus
ENSLACG00000019024	CPSF2	100	90.549	ENSOANG00000003822	CPSF2	100	90.038	Ornithorhynchus_anatinus
ENSLACG00000019024	CPSF2	100	90.166	ENSOCUG00000005713	CPSF2	100	89.911	Oryctolagus_cuniculus
ENSLACG00000019024	CPSF2	100	78.861	ENSORLG00000011628	cpsf2	100	78.553	Oryzias_latipes
ENSLACG00000019024	CPSF2	100	83.671	ENSORLG00020016980	cpsf2	100	83.376	Oryzias_latipes_hni
ENSLACG00000019024	CPSF2	100	83.671	ENSORLG00015011910	cpsf2	100	83.376	Oryzias_latipes_hsok
ENSLACG00000019024	CPSF2	100	83.165	ENSOMEG00000022876	cpsf2	100	82.890	Oryzias_melastigma
ENSLACG00000019024	CPSF2	100	87.134	ENSOARG00000012889	CPSF2	100	86.624	Ovis_aries
ENSLACG00000019024	CPSF2	100	89.911	ENSPPAG00000039666	CPSF2	100	89.655	Pan_paniscus
ENSLACG00000019024	CPSF2	99	90.026	ENSPPRG00000010869	CPSF2	100	89.514	Panthera_pardus
ENSLACG00000019024	CPSF2	100	90.038	ENSPTIG00000021202	CPSF2	100	89.527	Panthera_tigris_altaica
ENSLACG00000019024	CPSF2	100	89.911	ENSPTRG00000006651	CPSF2	100	89.655	Pan_troglodytes
ENSLACG00000019024	CPSF2	100	90.038	ENSPANG00000017417	CPSF2	100	89.527	Papio_anubis
ENSLACG00000019024	CPSF2	100	79.924	ENSPKIG00000021453	cpsf2	100	79.416	Paramormyrops_kingsleyae
ENSLACG00000019024	CPSF2	100	90.294	ENSPSIG00000006289	CPSF2	100	89.527	Pelodiscus_sinensis
ENSLACG00000019024	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.568	Periophthalmus_magnuspinnatus
ENSLACG00000019024	CPSF2	100	90.038	ENSPEMG00000007917	Cpsf2	100	89.527	Peromyscus_maniculatus_bairdii
ENSLACG00000019024	CPSF2	100	74.842	ENSPMAG00000006205	cpsf2	100	74.842	Petromyzon_marinus
ENSLACG00000019024	CPSF2	100	90.166	ENSPCIG00000011393	CPSF2	100	89.655	Phascolarctos_cinereus
ENSLACG00000019024	CPSF2	100	83.777	ENSPFOG00000018648	cpsf2	100	83.376	Poecilia_formosa
ENSLACG00000019024	CPSF2	100	83.777	ENSPLAG00000019199	cpsf2	99	83.376	Poecilia_latipinna
ENSLACG00000019024	CPSF2	96	84.079	ENSPMEG00000012100	cpsf2	100	82.731	Poecilia_mexicana
ENSLACG00000019024	CPSF2	100	83.650	ENSPREG00000008960	cpsf2	100	83.376	Poecilia_reticulata
ENSLACG00000019024	CPSF2	63	87.525	ENSPPYG00000029685	-	100	86.318	Pongo_abelii
ENSLACG00000019024	CPSF2	100	89.783	ENSPCAG00000012477	CPSF2	100	89.527	Procavia_capensis
ENSLACG00000019024	CPSF2	100	89.911	ENSPCOG00000026387	CPSF2	100	89.527	Propithecus_coquereli
ENSLACG00000019024	CPSF2	65	92.373	ENSPVAG00000004223	CPSF2	65	92.373	Pteropus_vampyrus
ENSLACG00000019024	CPSF2	100	84.051	ENSPNYG00000023356	cpsf2	100	83.904	Pundamilia_nyererei
ENSLACG00000019024	CPSF2	100	85.388	ENSPNAG00000001849	cpsf2	100	84.879	Pygocentrus_nattereri
ENSLACG00000019024	CPSF2	100	90.038	ENSRNOG00000005733	Cpsf2	100	89.783	Rattus_norvegicus
ENSLACG00000019024	CPSF2	100	90.038	ENSRBIG00000044792	CPSF2	100	89.527	Rhinopithecus_bieti
ENSLACG00000019024	CPSF2	100	90.038	ENSRROG00000034875	CPSF2	100	89.527	Rhinopithecus_roxellana
ENSLACG00000019024	CPSF2	100	89.911	ENSSBOG00000024571	CPSF2	100	89.655	Saimiri_boliviensis_boliviensis
ENSLACG00000019024	CPSF2	100	90.166	ENSSHAG00000010458	CPSF2	100	89.655	Sarcophilus_harrisii
ENSLACG00000019024	CPSF2	100	84.879	ENSSFOG00015002117	cpsf2	100	85.006	Scleropages_formosus
ENSLACG00000019024	CPSF2	100	82.763	ENSSMAG00000002001	cpsf2	100	82.890	Scophthalmus_maximus
ENSLACG00000019024	CPSF2	100	84.918	ENSSDUG00000004084	cpsf2	100	84.645	Seriola_dumerili
ENSLACG00000019024	CPSF2	100	84.411	ENSSLDG00000024330	cpsf2	100	84.137	Seriola_lalandi_dorsalis
ENSLACG00000019024	CPSF2	58	98.020	ENSSARG00000009784	-	63	98.020	Sorex_araneus
ENSLACG00000019024	CPSF2	100	90.166	ENSSPUG00000013485	CPSF2	100	89.400	Sphenodon_punctatus
ENSLACG00000019024	CPSF2	100	84.284	ENSSPAG00000013284	cpsf2	100	83.883	Stegastes_partitus
ENSLACG00000019024	CPSF2	100	89.911	ENSSSCG00000002447	CPSF2	100	89.655	Sus_scrofa
ENSLACG00000019024	CPSF2	100	91.049	ENSTGUG00000012571	-	100	91.049	Taeniopygia_guttata
ENSLACG00000019024	CPSF2	100	83.270	ENSTRUG00000003742	cpsf2	100	82.868	Takifugu_rubripes
ENSLACG00000019024	CPSF2	100	82.427	ENSTNIG00000012228	cpsf2	100	82.911	Tetraodon_nigroviridis
ENSLACG00000019024	CPSF2	91	87.555	ENSTBEG00000004530	CPSF2	94	87.116	Tupaia_belangeri
ENSLACG00000019024	CPSF2	88	89.286	ENSTTRG00000008697	CPSF2	88	88.975	Tursiops_truncatus
ENSLACG00000019024	CPSF2	100	90.038	ENSUAMG00000028071	CPSF2	100	89.527	Ursus_americanus
ENSLACG00000019024	CPSF2	100	90.038	ENSUMAG00000005029	CPSF2	100	92.788	Ursus_maritimus
ENSLACG00000019024	CPSF2	99	89.898	ENSVPAG00000003503	CPSF2	100	89.386	Vicugna_pacos
ENSLACG00000019024	CPSF2	100	90.038	ENSVVUG00000024642	CPSF2	100	89.783	Vulpes_vulpes
ENSLACG00000019024	CPSF2	100	88.761	ENSXETG00000010289	cpsf2	100	88.250	Xenopus_tropicalis
ENSLACG00000019024	CPSF2	100	83.650	ENSXCOG00000001764	cpsf2	100	83.376	Xiphophorus_couchianus
ENSLACG00000019024	CPSF2	100	84.030	ENSXMAG00000017048	cpsf2	100	83.756	Xiphophorus_maculatus