EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000019053 (Gene tree)
Gene ID: -
Gene Symbol: WDHD1
Alias: AND-1|CHTF4|CTF4
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 58991 bases
Position: chrJH126564.1:6806859-6865849
Accession: 102352071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021684	eIF2A	PF08662.11	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021825	WDHD1-201	3411	XM_005986513	ENSLACP00000021684	1137 (aa)	XP_005986575	H3BIG3

Gene Model

Click here to download ENSLACG00000019053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000019053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000019053	WDHD1	99	63.795	ENSG00000198554	WDHD1	99	75.000	Homo_sapiens
ENSLACG00000019053	WDHD1	91	66.827	ENSAPOG00000001560	wdhd1	99	58.348	Acanthochromis_polyacanthus
ENSLACG00000019053	WDHD1	99	64.056	ENSAMEG00000014356	WDHD1	99	65.324	Ailuropoda_melanoleuca
ENSLACG00000019053	WDHD1	92	67.952	ENSACIG00000021530	wdhd1	99	57.706	Amphilophus_citrinellus
ENSLACG00000019053	WDHD1	99	59.340	ENSAOCG00000018123	wdhd1	99	58.813	Amphiprion_ocellaris
ENSLACG00000019053	WDHD1	73	66.986	ENSAPEG00000000157	wdhd1	99	59.035	Amphiprion_percula
ENSLACG00000019053	WDHD1	91	66.988	ENSATEG00000021986	wdhd1	99	58.478	Anabas_testudineus
ENSLACG00000019053	WDHD1	99	60.415	ENSACAG00000016303	WDHD1	99	60.312	Anolis_carolinensis
ENSLACG00000019053	WDHD1	99	58.513	ENSACLG00000009036	wdhd1	99	58.290	Astatotilapia_calliptera
ENSLACG00000019053	WDHD1	73	62.470	ENSAMXG00000043712	wdhd1	98	63.576	Astyanax_mexicanus
ENSLACG00000019053	WDHD1	99	63.272	ENSBTAG00000019120	WDHD1	100	62.837	Bos_taurus
ENSLACG00000019053	WDHD1	99	62.892	ENSCJAG00000018208	WDHD1	100	62.456	Callithrix_jacchus
ENSLACG00000019053	WDHD1	89	60.878	ENSCAFG00000014989	WDHD1	99	59.961	Canis_familiaris
ENSLACG00000019053	WDHD1	99	63.296	ENSCHIG00000017956	WDHD1	100	62.860	Capra_hircus
ENSLACG00000019053	WDHD1	99	61.652	ENSTSYG00000000266	WDHD1	100	60.870	Carlito_syrichta
ENSLACG00000019053	WDHD1	61	71.207	ENSCCAG00000018389	WDHD1	100	62.845	Cebus_capucinus
ENSLACG00000019053	WDHD1	99	63.644	ENSCATG00000035221	WDHD1	100	63.034	Cercocebus_atys
ENSLACG00000019053	WDHD1	56	65.576	ENSCLAG00000013863	-	99	64.953	Chinchilla_lanigera
ENSLACG00000019053	WDHD1	98	62.877	ENSCSAG00000014757	WDHD1	100	62.256	Chlorocebus_sabaeus
ENSLACG00000019053	WDHD1	99	64.255	ENSCPBG00000020071	WDHD1	99	63.874	Chrysemys_picta_bellii
ENSLACG00000019053	WDHD1	93	68.091	ENSCANG00000037721	WDHD1	100	67.379	Colobus_angolensis_palliatus
ENSLACG00000019053	WDHD1	99	57.835	ENSDARG00000015998	wdhd1	97	69.799	Danio_rerio
ENSLACG00000019053	WDHD1	99	58.319	ENSDNOG00000006661	WDHD1	72	66.058	Dasypus_novemcinctus
ENSLACG00000019053	WDHD1	99	63.913	ENSECAG00000015412	WDHD1	97	63.565	Equus_caballus
ENSLACG00000019053	WDHD1	99	58.484	ENSELUG00000015575	wdhd1	97	67.033	Esox_lucius
ENSLACG00000019053	WDHD1	99	63.534	ENSFCAG00000023408	-	100	62.805	Felis_catus
ENSLACG00000019053	WDHD1	99	63.787	ENSGALG00000012199	WDHD1	99	62.315	Gallus_gallus
ENSLACG00000019053	WDHD1	99	48.816	ENSGACG00000017321	wdhd1	99	49.115	Gasterosteus_aculeatus
ENSLACG00000019053	WDHD1	73	71.308	ENSGAGG00000010665	-	93	71.446	Gopherus_agassizii
ENSLACG00000019053	WDHD1	99	63.534	ENSGGOG00000007744	WDHD1	100	62.924	Gorilla_gorilla
ENSLACG00000019053	WDHD1	99	62.576	ENSHGLG00000015105	WDHD1	100	62.108	Heterocephalus_glaber_female
ENSLACG00000019053	WDHD1	99	61.813	ENSHGLG00100001967	WDHD1	100	61.290	Heterocephalus_glaber_male
ENSLACG00000019053	WDHD1	99	56.605	ENSHCOG00000007286	wdhd1	99	56.469	Hippocampus_comes
ENSLACG00000019053	WDHD1	99	62.795	ENSSTOG00000020300	WDHD1	100	61.888	Ictidomys_tridecemlineatus
ENSLACG00000019053	WDHD1	99	56.098	ENSJJAG00000001164	Wdhd1	100	56.484	Jaculus_jaculus
ENSLACG00000019053	WDHD1	99	57.180	ENSLBEG00000024847	wdhd1	99	57.131	Labrus_bergylta
ENSLACG00000019053	WDHD1	99	61.299	ENSLOCG00000012086	wdhd1	99	60.192	Lepisosteus_oculatus
ENSLACG00000019053	WDHD1	99	63.810	ENSLAFG00000005385	WDHD1	99	63.203	Loxodonta_africana
ENSLACG00000019053	WDHD1	99	63.415	ENSMFAG00000032915	WDHD1	100	62.979	Macaca_fascicularis
ENSLACG00000019053	WDHD1	99	63.557	ENSMMUG00000000302	WDHD1	100	63.034	Macaca_mulatta
ENSLACG00000019053	WDHD1	99	63.415	ENSMNEG00000032489	WDHD1	100	62.979	Macaca_nemestrina
ENSLACG00000019053	WDHD1	99	63.415	ENSMLEG00000035661	WDHD1	100	62.979	Mandrillus_leucophaeus
ENSLACG00000019053	WDHD1	99	58.253	ENSMAMG00000016742	wdhd1	99	57.568	Mastacembelus_armatus
ENSLACG00000019053	WDHD1	99	58.600	ENSMZEG00005015228	wdhd1	99	58.377	Maylandia_zebra
ENSLACG00000019053	WDHD1	99	62.860	ENSMGAG00000013676	WDHD1	99	61.780	Meleagris_gallopavo
ENSLACG00000019053	WDHD1	99	63.304	ENSMICG00000016239	WDHD1	100	61.967	Microcebus_murinus
ENSLACG00000019053	WDHD1	99	55.391	ENSMMOG00000007869	wdhd1	99	55.565	Mola_mola
ENSLACG00000019053	WDHD1	99	62.369	ENSMODG00000011703	WDHD1	99	61.364	Monodelphis_domestica
ENSLACG00000019053	WDHD1	56	64.019	MGP_CAROLIEiJ_G0019163	Wdhd1	98	63.707	Mus_caroli
ENSLACG00000019053	WDHD1	56	63.863	MGP_PahariEiJ_G0030180	Wdhd1	98	63.551	Mus_pahari
ENSLACG00000019053	WDHD1	99	60.817	ENSMPUG00000005542	WDHD1	100	60.121	Mustela_putorius_furo
ENSLACG00000019053	WDHD1	99	62.924	ENSMLUG00000010353	WDHD1	100	62.576	Myotis_lucifugus
ENSLACG00000019053	WDHD1	99	59.103	ENSNBRG00000010071	wdhd1	99	59.842	Neolamprologus_brichardi
ENSLACG00000019053	WDHD1	99	62.805	ENSNLEG00000012760	WDHD1	100	62.195	Nomascus_leucogenys
ENSLACG00000019053	WDHD1	73	77.876	ENSMEUG00000006706	WDHD1	74	77.876	Notamacropus_eugenii
ENSLACG00000019053	WDHD1	99	59.509	ENSONIG00000007084	wdhd1	99	59.035	Oreochromis_niloticus
ENSLACG00000019053	WDHD1	99	63.534	ENSOCUG00000004987	WDHD1	100	63.240	Oryctolagus_cuniculus
ENSLACG00000019053	WDHD1	94	57.196	ENSORLG00000019721	wdhd1	98	56.599	Oryzias_latipes
ENSLACG00000019053	WDHD1	99	56.484	ENSORLG00020007040	wdhd1	99	56.632	Oryzias_latipes_hni
ENSLACG00000019053	WDHD1	99	56.856	ENSORLG00015008848	wdhd1	99	56.597	Oryzias_latipes_hsok
ENSLACG00000019053	WDHD1	99	61.304	ENSOGAG00000003465	WDHD1	100	60.295	Otolemur_garnettii
ENSLACG00000019053	WDHD1	99	63.383	ENSOARG00000021081	WDHD1	100	62.947	Ovis_aries
ENSLACG00000019053	WDHD1	99	62.249	ENSPPAG00000035486	WDHD1	100	61.988	Pan_paniscus
ENSLACG00000019053	WDHD1	99	63.621	ENSPPRG00000007679	WDHD1	100	62.892	Panthera_pardus
ENSLACG00000019053	WDHD1	99	63.446	ENSPTIG00000013608	WDHD1	100	62.718	Panthera_tigris_altaica
ENSLACG00000019053	WDHD1	99	63.708	ENSPTRG00000006366	WDHD1	100	63.098	Pan_troglodytes
ENSLACG00000019053	WDHD1	99	62.947	ENSPANG00000017506	WDHD1	100	62.805	Papio_anubis
ENSLACG00000019053	WDHD1	99	56.858	ENSPKIG00000004863	wdhd1	99	56.635	Paramormyrops_kingsleyae
ENSLACG00000019053	WDHD1	99	63.628	ENSPSIG00000011635	WDHD1	98	65.771	Pelodiscus_sinensis
ENSLACG00000019053	WDHD1	99	63.850	ENSPPYG00000005834	WDHD1	100	63.502	Pongo_abelii
ENSLACG00000019053	WDHD1	99	58.247	ENSPVAG00000016064	WDHD1	100	57.528	Pteropus_vampyrus
ENSLACG00000019053	WDHD1	99	58.669	ENSPNYG00000019115	wdhd1	94	69.536	Pundamilia_nyererei
ENSLACG00000019053	WDHD1	99	58.412	ENSPNAG00000013823	wdhd1	99	59.138	Pygocentrus_nattereri
ENSLACG00000019053	WDHD1	99	59.773	ENSRNOG00000011167	Wdhd1	100	59.792	Rattus_norvegicus
ENSLACG00000019053	WDHD1	99	63.644	ENSRROG00000006993	WDHD1	100	63.034	Rhinopithecus_roxellana
ENSLACG00000019053	WDHD1	99	59.843	ENSSBOG00000034847	WDHD1	100	59.495	Saimiri_boliviensis_boliviensis
ENSLACG00000019053	WDHD1	97	61.552	ENSSHAG00000013551	WDHD1	99	60.393	Sarcophilus_harrisii
ENSLACG00000019053	WDHD1	92	67.594	ENSSFOG00015009950	wdhd1	99	57.592	Scleropages_formosus
ENSLACG00000019053	WDHD1	99	57.131	ENSSMAG00000007346	wdhd1	99	58.261	Scophthalmus_maximus
ENSLACG00000019053	WDHD1	99	54.278	ENSSDUG00000016996	wdhd1	73	62.289	Seriola_dumerili
ENSLACG00000019053	WDHD1	99	56.311	ENSSLDG00000021689	wdhd1	98	68.966	Seriola_lalandi_dorsalis
ENSLACG00000019053	WDHD1	99	63.011	ENSSSCG00000005052	WDHD1	100	62.663	Sus_scrofa
ENSLACG00000019053	WDHD1	99	58.023	ENSTNIG00000018803	wdhd1	99	58.633	Tetraodon_nigroviridis
ENSLACG00000019053	WDHD1	99	61.077	ENSTTRG00000003314	WDHD1	100	60.174	Tursiops_truncatus
ENSLACG00000019053	WDHD1	61	69.209	ENSUAMG00000015360	-	96	68.489	Ursus_americanus
ENSLACG00000019053	WDHD1	99	64.087	ENSUMAG00000015946	WDHD1	100	63.621	Ursus_maritimus
ENSLACG00000019053	WDHD1	99	62.641	ENSVPAG00000008394	WDHD1	100	61.706	Vicugna_pacos
ENSLACG00000019053	WDHD1	99	63.240	ENSVVUG00000029613	WDHD1	100	62.315	Vulpes_vulpes
ENSLACG00000019053	WDHD1	99	60.733	ENSXETG00000012210	wdhd1	99	60.400	Xenopus_tropicalis