EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000019064 (Gene tree)
Gene ID: 102356433
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 35150 bases
Position: chrJH126563.1:6986123-7021272
Accession: 102356433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021698	R3H	PF01424.22	7.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000021839	-	4559	XM_005986353	ENSLACP00000021698	971 (aa)	XP_005986415	H3BIH7

Gene Model

Click here to download ENSLACG00000019064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000019064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000019064	r3hdm2	94	66.954	ENSLACG00000005334	R3HDM1	99	50.000
ENSLACG00000019064	r3hdm2	58	43.465	ENSLACG00000006737	ARPP21	91	45.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000019064	r3hdm2	100	69.618	ENSG00000179912	R3HDM2	100	67.595	Homo_sapiens
ENSLACG00000019064	r3hdm2	100	65.184	ENSAPOG00000020341	r3hdm2	95	67.246	Acanthochromis_polyacanthus
ENSLACG00000019064	r3hdm2	58	40.000	ENSAPOG00000021873	-	88	37.226	Acanthochromis_polyacanthus
ENSLACG00000019064	r3hdm2	100	72.818	ENSAMEG00000004812	R3HDM2	95	73.019	Ailuropoda_melanoleuca
ENSLACG00000019064	r3hdm2	99	60.321	ENSACIG00000016146	r3hdm2	98	60.360	Amphilophus_citrinellus
ENSLACG00000019064	r3hdm2	100	65.087	ENSAOCG00000023694	r3hdm2	95	67.150	Amphiprion_ocellaris
ENSLACG00000019064	r3hdm2	100	64.313	ENSAPEG00000008851	r3hdm2	99	65.604	Amphiprion_percula
ENSLACG00000019064	r3hdm2	99	62.687	ENSATEG00000025024	r3hdm2	100	63.718	Anabas_testudineus
ENSLACG00000019064	r3hdm2	99	79.320	ENSAPLG00000004298	R3HDM2	95	65.703	Anas_platyrhynchos
ENSLACG00000019064	r3hdm2	100	66.176	ENSACAG00000006388	R3HDM2	95	65.756	Anolis_carolinensis
ENSLACG00000019064	r3hdm2	100	65.962	ENSANAG00000031310	-	96	65.726	Aotus_nancymaae
ENSLACG00000019064	r3hdm2	100	69.889	ENSANAG00000025397	-	95	69.657	Aotus_nancymaae
ENSLACG00000019064	r3hdm2	100	65.800	ENSACLG00000019106	r3hdm2	95	67.408	Astatotilapia_calliptera
ENSLACG00000019064	r3hdm2	100	68.718	ENSBTAG00000018361	R3HDM2	94	68.618	Bos_taurus
ENSLACG00000019064	r3hdm2	100	69.960	ENSCJAG00000007365	R3HDM2	95	69.859	Callithrix_jacchus
ENSLACG00000019064	r3hdm2	98	72.308	ENSCAFG00000000215	R3HDM2	95	69.920	Canis_familiaris
ENSLACG00000019064	r3hdm2	100	72.133	ENSCAFG00020023713	R3HDM2	95	72.334	Canis_lupus_dingo
ENSLACG00000019064	r3hdm2	100	72.149	ENSCHIG00000014022	R3HDM2	95	71.847	Capra_hircus
ENSLACG00000019064	r3hdm2	100	68.876	ENSTSYG00000001449	R3HDM2	95	69.014	Carlito_syrichta
ENSLACG00000019064	r3hdm2	100	72.149	ENSCPOG00000009217	R3HDM2	95	71.919	Cavia_porcellus
ENSLACG00000019064	r3hdm2	88	69.932	ENSCCAG00000026083	R3HDM2	94	68.451	Cebus_capucinus
ENSLACG00000019064	r3hdm2	100	72.060	ENSCATG00000036929	R3HDM2	95	71.672	Cercocebus_atys
ENSLACG00000019064	r3hdm2	100	72.189	ENSCLAG00000011997	R3HDM2	95	72.056	Chinchilla_lanigera
ENSLACG00000019064	r3hdm2	100	71.042	ENSCSAG00000004911	R3HDM2	95	70.788	Chlorocebus_sabaeus
ENSLACG00000019064	r3hdm2	74	72.260	ENSCHOG00000005636	R3HDM2	84	73.826	Choloepus_hoffmanni
ENSLACG00000019064	r3hdm2	100	70.217	ENSCPBG00000013922	R3HDM2	95	70.217	Chrysemys_picta_bellii
ENSLACG00000019064	r3hdm2	100	72.105	ENSCANG00000043807	R3HDM2	95	71.875	Colobus_angolensis_palliatus
ENSLACG00000019064	r3hdm2	100	71.960	ENSCGRG00001017324	R3hdm2	95	72.088	Cricetulus_griseus_chok1gshd
ENSLACG00000019064	r3hdm2	100	71.960	ENSCGRG00000003862	R3hdm2	95	72.088	Cricetulus_griseus_crigri
ENSLACG00000019064	r3hdm2	100	64.638	ENSCSEG00000010925	r3hdm2	95	66.023	Cynoglossus_semilaevis
ENSLACG00000019064	r3hdm2	100	64.956	ENSCVAG00000009058	r3hdm2	95	66.441	Cyprinodon_variegatus
ENSLACG00000019064	r3hdm2	99	62.222	ENSDARG00000102610	r3hdm2	99	63.105	Danio_rerio
ENSLACG00000019064	r3hdm2	100	70.659	ENSDNOG00000015033	R3HDM2	100	71.459	Dasypus_novemcinctus
ENSLACG00000019064	r3hdm2	99	66.869	ENSDORG00000011462	R3hdm2	99	66.768	Dipodomys_ordii
ENSLACG00000019064	r3hdm2	100	72.965	ENSEASG00005007091	R3HDM2	95	72.800	Equus_asinus_asinus
ENSLACG00000019064	r3hdm2	100	73.360	ENSECAG00000003157	R3HDM2	95	73.259	Equus_caballus
ENSLACG00000019064	r3hdm2	100	62.631	ENSELUG00000015969	r3hdm2	94	65.613	Esox_lucius
ENSLACG00000019064	r3hdm2	100	72.736	ENSFCAG00000000192	R3HDM2	95	72.301	Felis_catus
ENSLACG00000019064	r3hdm2	86	66.667	ENSFALG00000000255	R3HDM2	94	66.156	Ficedula_albicollis
ENSLACG00000019064	r3hdm2	100	72.172	ENSFDAG00000019385	R3HDM2	95	72.372	Fukomys_damarensis
ENSLACG00000019064	r3hdm2	53	38.616	ENSFHEG00000007936	-	75	37.857	Fundulus_heteroclitus
ENSLACG00000019064	r3hdm2	100	64.666	ENSFHEG00000016484	r3hdm2	95	66.377	Fundulus_heteroclitus
ENSLACG00000019064	r3hdm2	97	70.259	ENSGMOG00000007961	r3hdm2	95	70.717	Gadus_morhua
ENSLACG00000019064	r3hdm2	100	68.985	ENSGALG00000043736	R3HDM2	95	68.719	Gallus_gallus
ENSLACG00000019064	r3hdm2	100	65.698	ENSGAFG00000013887	r3hdm2	95	66.989	Gambusia_affinis
ENSLACG00000019064	r3hdm2	54	39.787	ENSGAFG00000015558	-	78	39.161	Gambusia_affinis
ENSLACG00000019064	r3hdm2	100	64.862	ENSGACG00000006442	r3hdm2	99	66.963	Gasterosteus_aculeatus
ENSLACG00000019064	r3hdm2	100	69.685	ENSGAGG00000017797	R3HDM2	94	69.587	Gopherus_agassizii
ENSLACG00000019064	r3hdm2	100	71.960	ENSGGOG00000015007	R3HDM2	95	71.572	Gorilla_gorilla
ENSLACG00000019064	r3hdm2	94	61.235	ENSHGLG00000010421	-	97	61.629	Heterocephalus_glaber_female
ENSLACG00000019064	r3hdm2	100	72.289	ENSHGLG00000010434	-	95	72.128	Heterocephalus_glaber_female
ENSLACG00000019064	r3hdm2	100	72.189	ENSHGLG00100004183	-	95	72.028	Heterocephalus_glaber_male
ENSLACG00000019064	r3hdm2	98	59.918	ENSHGLG00100018871	-	96	60.870	Heterocephalus_glaber_male
ENSLACG00000019064	r3hdm2	100	63.944	ENSHCOG00000001142	r3hdm2	92	65.579	Hippocampus_comes
ENSLACG00000019064	r3hdm2	100	62.319	ENSIPUG00000023873	r3hdm2	95	62.694	Ictalurus_punctatus
ENSLACG00000019064	r3hdm2	100	65.130	ENSSTOG00000013424	R3HDM2	94	66.497	Ictidomys_tridecemlineatus
ENSLACG00000019064	r3hdm2	100	73.112	ENSJJAG00000010001	R3hdm2	95	73.212	Jaculus_jaculus
ENSLACG00000019064	r3hdm2	100	65.828	ENSKMAG00000012695	r3hdm2	99	63.263	Kryptolebias_marmoratus
ENSLACG00000019064	r3hdm2	100	64.854	ENSLBEG00000013115	r3hdm2	92	66.731	Labrus_bergylta
ENSLACG00000019064	r3hdm2	53	40.468	ENSLBEG00000002779	-	83	40.531	Labrus_bergylta
ENSLACG00000019064	r3hdm2	100	64.897	ENSLOCG00000005976	r3hdm2	95	66.437	Lepisosteus_oculatus
ENSLACG00000019064	r3hdm2	100	72.563	ENSLAFG00000006510	R3HDM2	95	72.627	Loxodonta_africana
ENSLACG00000019064	r3hdm2	100	71.687	ENSMFAG00000036385	R3HDM2	95	71.500	Macaca_fascicularis
ENSLACG00000019064	r3hdm2	100	72.490	ENSMMUG00000021789	R3HDM2	95	72.300	Macaca_mulatta
ENSLACG00000019064	r3hdm2	100	71.586	ENSMNEG00000025314	R3HDM2	95	71.429	Macaca_nemestrina
ENSLACG00000019064	r3hdm2	100	71.960	ENSMLEG00000028915	R3HDM2	95	71.572	Mandrillus_leucophaeus
ENSLACG00000019064	r3hdm2	100	64.348	ENSMAMG00000009793	r3hdm2	95	66.120	Mastacembelus_armatus
ENSLACG00000019064	r3hdm2	53	40.217	ENSMAMG00000011755	-	75	39.037	Mastacembelus_armatus
ENSLACG00000019064	r3hdm2	100	65.800	ENSMZEG00005007319	r3hdm2	95	67.408	Maylandia_zebra
ENSLACG00000019064	r3hdm2	100	69.715	ENSMICG00000012389	R3HDM2	95	69.392	Microcebus_murinus
ENSLACG00000019064	r3hdm2	100	72.205	ENSMOCG00000014425	R3hdm2	95	72.244	Microtus_ochrogaster
ENSLACG00000019064	r3hdm2	100	61.715	ENSMMOG00000007448	r3hdm2	99	61.914	Mola_mola
ENSLACG00000019064	r3hdm2	90	70.845	ENSMALG00000010211	r3hdm2	98	57.070	Monopterus_albus
ENSLACG00000019064	r3hdm2	100	72.283	MGP_CAROLIEiJ_G0015896	R3hdm2	95	72.545	Mus_caroli
ENSLACG00000019064	r3hdm2	100	72.555	ENSMUSG00000025404	R3hdm2	95	72.818	Mus_musculus
ENSLACG00000019064	r3hdm2	100	72.837	MGP_PahariEiJ_G0031189	R3hdm2	95	73.139	Mus_pahari
ENSLACG00000019064	r3hdm2	100	72.510	MGP_SPRETEiJ_G0016722	R3hdm2	95	72.773	Mus_spretus
ENSLACG00000019064	r3hdm2	98	72.680	ENSMPUG00000001818	R3HDM2	91	72.887	Mustela_putorius_furo
ENSLACG00000019064	r3hdm2	100	72.837	ENSMLUG00000004980	R3HDM2	95	72.837	Myotis_lucifugus
ENSLACG00000019064	r3hdm2	100	73.917	ENSNGAG00000018800	R3hdm2	95	73.817	Nannospalax_galili
ENSLACG00000019064	r3hdm2	99	56.789	ENSNBRG00000004483	r3hdm2	100	61.508	Neolamprologus_brichardi
ENSLACG00000019064	r3hdm2	100	72.105	ENSNLEG00000017351	R3HDM2	95	71.875	Nomascus_leucogenys
ENSLACG00000019064	r3hdm2	100	63.572	ENSMEUG00000008588	R3HDM2	95	63.454	Notamacropus_eugenii
ENSLACG00000019064	r3hdm2	100	61.361	ENSOPRG00000013670	R3HDM2	94	62.500	Ochotona_princeps
ENSLACG00000019064	r3hdm2	100	63.003	ENSONIG00000005075	r3hdm2	95	64.532	Oreochromis_niloticus
ENSLACG00000019064	r3hdm2	100	72.372	ENSOCUG00000013258	R3HDM2	95	72.211	Oryctolagus_cuniculus
ENSLACG00000019064	r3hdm2	100	65.146	ENSORLG00000005502	r3hdm2	95	66.117	Oryzias_latipes
ENSLACG00000019064	r3hdm2	65	35.988	ENSORLG00000011606	-	83	36.159	Oryzias_latipes
ENSLACG00000019064	r3hdm2	100	65.019	ENSORLG00020017069	r3hdm2	95	65.988	Oryzias_latipes_hni
ENSLACG00000019064	r3hdm2	52	37.321	ENSORLG00020019613	-	74	35.764	Oryzias_latipes_hni
ENSLACG00000019064	r3hdm2	100	65.116	ENSORLG00015012735	r3hdm2	95	66.085	Oryzias_latipes_hsok
ENSLACG00000019064	r3hdm2	53	36.625	ENSOMEG00000016256	-	74	35.778	Oryzias_melastigma
ENSLACG00000019064	r3hdm2	99	58.250	ENSOMEG00000018079	r3hdm2	93	59.245	Oryzias_melastigma
ENSLACG00000019064	r3hdm2	96	61.199	ENSOGAG00000027966	-	94	61.094	Otolemur_garnettii
ENSLACG00000019064	r3hdm2	100	69.378	ENSOGAG00000012055	R3HDM2	95	69.331	Otolemur_garnettii
ENSLACG00000019064	r3hdm2	100	68.511	ENSOARG00000006929	R3HDM2	94	68.209	Ovis_aries
ENSLACG00000019064	r3hdm2	100	72.060	ENSPPAG00000034395	R3HDM2	95	71.672	Pan_paniscus
ENSLACG00000019064	r3hdm2	100	69.618	ENSPPRG00000009240	R3HDM2	95	69.920	Panthera_pardus
ENSLACG00000019064	r3hdm2	100	69.618	ENSPTIG00000008752	R3HDM2	95	69.920	Panthera_tigris_altaica
ENSLACG00000019064	r3hdm2	100	71.787	ENSPTRG00000046457	R3HDM2	95	71.600	Pan_troglodytes
ENSLACG00000019064	r3hdm2	99	69.486	ENSPANG00000024002	R3HDM2	97	69.238	Papio_anubis
ENSLACG00000019064	r3hdm2	100	65.745	ENSPKIG00000003171	r3hdm2	95	65.972	Paramormyrops_kingsleyae
ENSLACG00000019064	r3hdm2	63	60.601	ENSPSIG00000006954	R3HDM2	91	60.601	Pelodiscus_sinensis
ENSLACG00000019064	r3hdm2	99	63.996	ENSPMGG00000007061	r3hdm2	99	63.968	Periophthalmus_magnuspinnatus
ENSLACG00000019064	r3hdm2	100	73.158	ENSPEMG00000015964	R3hdm2	95	73.158	Peromyscus_maniculatus_bairdii
ENSLACG00000019064	r3hdm2	100	69.153	ENSPCIG00000023841	R3HDM2	100	67.188	Phascolarctos_cinereus
ENSLACG00000019064	r3hdm2	58	38.944	ENSPFOG00000008096	-	78	39.609	Poecilia_formosa
ENSLACG00000019064	r3hdm2	58	38.614	ENSPLAG00000006973	-	78	39.254	Poecilia_latipinna
ENSLACG00000019064	r3hdm2	100	64.182	ENSPLAG00000002971	r3hdm2	100	59.922	Poecilia_latipinna
ENSLACG00000019064	r3hdm2	100	64.182	ENSPMEG00000005330	r3hdm2	100	59.922	Poecilia_mexicana
ENSLACG00000019064	r3hdm2	58	38.614	ENSPMEG00000014457	-	78	39.609	Poecilia_mexicana
ENSLACG00000019064	r3hdm2	100	64.791	ENSPREG00000008424	r3hdm2	95	66.215	Poecilia_reticulata
ENSLACG00000019064	r3hdm2	98	63.655	ENSPPYG00000004685	R3HDM2	76	64.516	Pongo_abelii
ENSLACG00000019064	r3hdm2	92	83.094	ENSPCAG00000014642	R3HDM2	92	83.094	Procavia_capensis
ENSLACG00000019064	r3hdm2	100	69.618	ENSPCOG00000013201	R3HDM2	95	69.670	Propithecus_coquereli
ENSLACG00000019064	r3hdm2	100	73.011	ENSPVAG00000003967	R3HDM2	95	72.782	Pteropus_vampyrus
ENSLACG00000019064	r3hdm2	99	60.555	ENSPNYG00000013479	r3hdm2	100	61.990	Pundamilia_nyererei
ENSLACG00000019064	r3hdm2	100	63.911	ENSPNAG00000017473	r3hdm2	95	65.373	Pygocentrus_nattereri
ENSLACG00000019064	r3hdm2	100	72.044	ENSRNOG00000007801	R3hdm2	95	72.144	Rattus_norvegicus
ENSLACG00000019064	r3hdm2	100	68.077	ENSRBIG00000037403	R3HDM2	94	67.843	Rhinopithecus_bieti
ENSLACG00000019064	r3hdm2	100	72.883	ENSRROG00000022271	R3HDM2	95	71.976	Rhinopithecus_roxellana
ENSLACG00000019064	r3hdm2	100	70.091	ENSSBOG00000023547	R3HDM2	95	69.859	Saimiri_boliviensis_boliviensis
ENSLACG00000019064	r3hdm2	100	70.191	ENSSHAG00000003511	R3HDM2	95	69.930	Sarcophilus_harrisii
ENSLACG00000019064	r3hdm2	99	64.214	ENSSFOG00015011219	r3hdm2	99	64.436	Scleropages_formosus
ENSLACG00000019064	r3hdm2	100	65.558	ENSSMAG00000012073	r3hdm2	95	66.895	Scophthalmus_maximus
ENSLACG00000019064	r3hdm2	100	64.217	ENSSDUG00000019269	r3hdm2	100	61.776	Seriola_dumerili
ENSLACG00000019064	r3hdm2	100	65.213	ENSSLDG00000005252	r3hdm2	95	67.184	Seriola_lalandi_dorsalis
ENSLACG00000019064	r3hdm2	91	66.239	ENSSARG00000003958	R3HDM2	89	66.300	Sorex_araneus
ENSLACG00000019064	r3hdm2	100	65.362	ENSSPUG00000014132	R3HDM2	95	65.264	Sphenodon_punctatus
ENSLACG00000019064	r3hdm2	100	63.892	ENSSPAG00000022594	r3hdm2	100	61.145	Stegastes_partitus
ENSLACG00000019064	r3hdm2	58	39.160	ENSSPAG00000016856	-	75	39.929	Stegastes_partitus
ENSLACG00000019064	r3hdm2	100	69.021	ENSSSCG00000026498	R3HDM2	100	72.146	Sus_scrofa
ENSLACG00000019064	r3hdm2	72	69.425	ENSTGUG00000015881	R3HDM2	93	69.425	Taeniopygia_guttata
ENSLACG00000019064	r3hdm2	92	83.140	ENSTNIG00000007057	r3hdm2	87	84.302	Tetraodon_nigroviridis
ENSLACG00000019064	r3hdm2	81	67.986	ENSTBEG00000015967	R3HDM2	74	69.323	Tupaia_belangeri
ENSLACG00000019064	r3hdm2	100	58.039	ENSTTRG00000013082	R3HDM2	95	62.238	Tursiops_truncatus
ENSLACG00000019064	r3hdm2	100	71.831	ENSUAMG00000020913	R3HDM2	95	72.032	Ursus_americanus
ENSLACG00000019064	r3hdm2	96	71.728	ENSUMAG00000019179	R3HDM2	96	70.476	Ursus_maritimus
ENSLACG00000019064	r3hdm2	94	82.886	ENSVPAG00000008656	R3HDM2	88	83.099	Vicugna_pacos
ENSLACG00000019064	r3hdm2	98	72.205	ENSVVUG00000018014	R3HDM2	92	72.410	Vulpes_vulpes
ENSLACG00000019064	r3hdm2	100	67.100	ENSXETG00000017153	r3hdm2	95	67.066	Xenopus_tropicalis
ENSLACG00000019064	r3hdm2	92	58.307	ENSXCOG00000013882	r3hdm2	100	58.712	Xiphophorus_couchianus
ENSLACG00000019064	r3hdm2	54	39.609	ENSXMAG00000002994	-	89	34.632	Xiphophorus_maculatus
ENSLACG00000019064	r3hdm2	100	65.053	ENSXMAG00000017978	r3hdm2	95	66.570	Xiphophorus_maculatus