EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSLACG00000022111 (Gene tree)
Gene ID: 102348662
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-10-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 51540 bases
Position: chrJH126996.1:197053-248592
Accession: 102348662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000022177	MMR_HSR1	PF01926.23	6.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000026398	-	4204	XM_005998213	ENSLACP00000022177	199 (aa)	XP_005998275	M3XHH1

Gene Model

Click here to download ENSLACG00000022111's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000022111	-	75	36.000	ENSLACG00000013122	RRAS2	82	37.324
ENSLACG00000022111	-	66	37.121	ENSLACG00000010885	-	95	36.486
ENSLACG00000022111	-	58	31.897	ENSLACG00000010889	-	59	31.897
ENSLACG00000022111	-	80	42.138	ENSLACG00000014446	RAB2B	96	42.138
ENSLACG00000022111	-	83	40.588	ENSLACG00000017891	RAB9B	79	40.588
ENSLACG00000022111	-	75	36.000	ENSLACG00000017138	RRAS	92	36.646
ENSLACG00000022111	-	81	30.120	ENSLACG00000001282	-	78	30.120
ENSLACG00000022111	-	94	37.745	ENSLACG00000002523	RAB29	97	37.745
ENSLACG00000022111	-	83	45.455	ENSLACG00000006407	RAB30	81	45.455
ENSLACG00000022111	-	78	40.645	ENSLACG00000016974	RAB11B	90	40.645
ENSLACG00000022111	-	77	33.117	ENSLACG00000012088	rheb	83	33.117
ENSLACG00000022111	-	82	30.675	ENSLACG00000003722	rabl2	71	30.675
ENSLACG00000022111	-	83	47.879	ENSLACG00000008103	-	93	47.879
ENSLACG00000022111	-	94	36.842	ENSLACG00000007092	RAB22A	97	36.842
ENSLACG00000022111	-	75	34.667	ENSLACG00000018427	HRAS	84	35.404
ENSLACG00000022111	-	75	34.667	ENSLACG00000018428	NRAS	84	35.404
ENSLACG00000022111	-	77	43.506	ENSLACG00000005168	RAB6A	74	43.506
ENSLACG00000022111	-	83	45.181	ENSLACG00000009310	rab18a	80	45.181
ENSLACG00000022111	-	91	41.758	ENSLACG00000011256	rab18b	88	41.758
ENSLACG00000022111	-	95	39.683	ENSLACG00000016518	-	59	39.683
ENSLACG00000022111	-	81	40.491	ENSLACG00000012755	-	77	40.491
ENSLACG00000022111	-	81	38.650	ENSLACG00000002332	-	77	38.650
ENSLACG00000022111	-	88	36.571	ENSLACG00000004663	RAB5A	81	36.571
ENSLACG00000022111	-	81	40.741	ENSLACG00000011380	rab11al	75	40.741
ENSLACG00000022111	-	75	34.437	ENSLACG00000014985	RAP2B	87	35.185
ENSLACG00000022111	-	94	40.609	ENSLACG00000018444	RAB35	97	40.609
ENSLACG00000022111	-	77	32.484	ENSLACG00000001081	RAB34	61	32.484
ENSLACG00000022111	-	81	39.264	ENSLACG00000016074	RAB39B	77	39.264
ENSLACG00000022111	-	65	37.209	ENSLACG00000011001	RAB20	53	37.209
ENSLACG00000022111	-	86	36.932	ENSLACG00000008809	zgc:100918	85	36.932
ENSLACG00000022111	-	81	50.000	ENSLACG00000012869	RAB1A	79	50.000
ENSLACG00000022111	-	83	32.571	ENSLACG00000017799	RAB36	65	32.571
ENSLACG00000022111	-	96	35.323	ENSLACG00000011557	zgc:101559	87	35.323
ENSLACG00000022111	-	77	38.462	ENSLACG00000012674	si:dkey-34d22.5	74	38.462
ENSLACG00000022111	-	75	36.000	ENSLACG00000017464	KRAS	96	34.409
ENSLACG00000022111	-	95	36.139	ENSLACG00000011157	RAB25	94	36.139
ENSLACG00000022111	-	66	31.298	ENSLACG00000018793	RAN	88	31.298
ENSLACG00000022111	-	76	33.553	ENSLACG00000004025	RAB23	77	33.152
ENSLACG00000022111	-	77	32.051	ENSLACG00000010042	-	85	32.203
ENSLACG00000022111	-	81	40.123	ENSLACG00000012184	RAB11A	76	40.506
ENSLACG00000022111	-	86	38.636	ENSLACG00000015770	RAB7A	85	38.636
ENSLACG00000022111	-	97	31.500	ENSLACG00000016958	-	96	31.500
ENSLACG00000022111	-	83	46.707	ENSLACG00000010461	RAB12	67	46.707
ENSLACG00000022111	-	90	46.111	ENSLACG00000012717	RAB1B	89	46.111
ENSLACG00000022111	-	83	43.030	ENSLACG00000012521	RAB2A	78	43.030
ENSLACG00000022111	-	81	38.889	ENSLACG00000011181	RAB14	75	38.889
ENSLACG00000022111	-	94	35.385	ENSLACG00000013571	RAB33B	85	35.385
ENSLACG00000022111	-	86	43.353	ENSLACG00000013980	rab41	82	43.353
ENSLACG00000022111	-	81	39.752	ENSLACG00000016857	-	74	39.506
ENSLACG00000022111	-	80	31.429	ENSLACG00000014614	si:dkey-27j5.5	62	31.429