EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000022148 (Gene tree)
Gene ID: 102351940
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 144751 bases
Position: chrJH126755.1:986276-1131026
Accession: 102351940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023320	S4	PF01479.25	3.1e-08	1	1
ENSLACP00000023320	Ribosomal_S4	PF00163.19	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025009	-	1544	XM_005994068	ENSLACP00000023320	183 (aa)	XP_005994130	M3XKR4

Gene Model

Click here to download ENSLACG00000022148's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022148	imp3	100	82.514	ENSAPOG00000014720	imp3	100	82.514	Acanthochromis_polyacanthus
ENSLACG00000022148	imp3	100	75.543	ENSAMEG00000019247	IMP3	100	75.543	Ailuropoda_melanoleuca
ENSLACG00000022148	imp3	98	82.123	ENSACIG00000022070	imp3	96	82.123	Amphilophus_citrinellus
ENSLACG00000022148	imp3	100	83.060	ENSAOCG00000015761	imp3	100	83.060	Amphiprion_ocellaris
ENSLACG00000022148	imp3	100	81.421	ENSAPEG00000005250	imp3	100	81.421	Amphiprion_percula
ENSLACG00000022148	imp3	100	81.967	ENSATEG00000020021	imp3	100	81.967	Anabas_testudineus
ENSLACG00000022148	imp3	100	70.053	ENSACAG00000016259	IMP3	100	70.053	Anolis_carolinensis
ENSLACG00000022148	imp3	99	62.637	ENSANAG00000036874	-	99	62.637	Aotus_nancymaae
ENSLACG00000022148	imp3	100	73.913	ENSANAG00000016669	-	100	73.913	Aotus_nancymaae
ENSLACG00000022148	imp3	100	84.153	ENSACLG00000009929	imp3	100	84.153	Astatotilapia_calliptera
ENSLACG00000022148	imp3	96	81.143	ENSAMXG00000018715	imp3	99	81.143	Astyanax_mexicanus
ENSLACG00000022148	imp3	99	53.591	WBGene00016740	C48B6.2	99	53.591	Caenorhabditis_elegans
ENSLACG00000022148	imp3	100	73.913	ENSCJAG00000044585	IMP3	100	73.913	Callithrix_jacchus
ENSLACG00000022148	imp3	100	72.283	ENSCAFG00000018039	IMP3	82	72.283	Canis_familiaris
ENSLACG00000022148	imp3	100	55.978	ENSCAFG00020006737	-	100	57.609	Canis_lupus_dingo
ENSLACG00000022148	imp3	100	72.283	ENSCAFG00020003760	-	100	72.283	Canis_lupus_dingo
ENSLACG00000022148	imp3	100	75.000	ENSCHIG00000006295	IMP3	100	75.000	Capra_hircus
ENSLACG00000022148	imp3	100	74.457	ENSTSYG00000005503	IMP3	100	74.457	Carlito_syrichta
ENSLACG00000022148	imp3	100	75.000	ENSCPOG00000012016	IMP3	100	75.000	Cavia_porcellus
ENSLACG00000022148	imp3	98	63.333	ENSCCAG00000023378	-	99	62.069	Cebus_capucinus
ENSLACG00000022148	imp3	100	73.913	ENSCCAG00000002712	-	100	73.913	Cebus_capucinus
ENSLACG00000022148	imp3	100	73.913	ENSCATG00000015188	IMP3	100	73.913	Cercocebus_atys
ENSLACG00000022148	imp3	100	73.913	ENSCSAG00000019732	IMP3	100	73.913	Chlorocebus_sabaeus
ENSLACG00000022148	imp3	100	75.000	ENSCHOG00000012046	IMP3	100	75.000	Choloepus_hoffmanni
ENSLACG00000022148	imp3	100	69.730	ENSCPBG00000021662	IMP3	100	69.730	Chrysemys_picta_bellii
ENSLACG00000022148	imp3	98	67.222	ENSCING00000004233	-	99	67.222	Ciona_intestinalis
ENSLACG00000022148	imp3	98	67.778	ENSCSAVG00000000698	-	99	67.778	Ciona_savignyi
ENSLACG00000022148	imp3	100	73.913	ENSCANG00000018342	IMP3	100	73.913	Colobus_angolensis_palliatus
ENSLACG00000022148	imp3	100	74.457	ENSCGRG00001001326	Imp3	100	74.457	Cricetulus_griseus_chok1gshd
ENSLACG00000022148	imp3	100	74.457	ENSCGRG00000018907	Imp3	100	74.457	Cricetulus_griseus_crigri
ENSLACG00000022148	imp3	99	82.873	ENSCSEG00000017200	imp3	99	82.873	Cynoglossus_semilaevis
ENSLACG00000022148	imp3	100	75.135	ENSCVAG00000019511	imp3	100	75.135	Cyprinodon_variegatus
ENSLACG00000022148	imp3	100	80.874	ENSDARG00000115266	imp3	100	81.065	Danio_rerio
ENSLACG00000022148	imp3	100	73.913	ENSDNOG00000015787	IMP3	81	73.913	Dasypus_novemcinctus
ENSLACG00000022148	imp3	100	73.370	ENSDORG00000029301	Imp3	100	73.370	Dipodomys_ordii
ENSLACG00000022148	imp3	99	61.878	FBgn0034232	CG4866	100	61.878	Drosophila_melanogaster
ENSLACG00000022148	imp3	100	73.913	ENSETEG00000004278	IMP3	100	73.913	Echinops_telfairi
ENSLACG00000022148	imp3	99	75.275	ENSEBUG00000002343	imp3	100	75.275	Eptatretus_burgeri
ENSLACG00000022148	imp3	100	73.913	ENSEASG00005015693	IMP3	100	73.913	Equus_asinus_asinus
ENSLACG00000022148	imp3	100	74.457	ENSECAG00000015786	IMP3	100	74.457	Equus_caballus
ENSLACG00000022148	imp3	100	79.781	ENSELUG00000023264	imp3	100	79.781	Esox_lucius
ENSLACG00000022148	imp3	100	74.457	ENSFCAG00000040328	IMP3	100	74.457	Felis_catus
ENSLACG00000022148	imp3	72	59.091	ENSFALG00000014811	IMP3	100	61.364	Ficedula_albicollis
ENSLACG00000022148	imp3	100	75.000	ENSFDAG00000018422	IMP3	100	75.000	Fukomys_damarensis
ENSLACG00000022148	imp3	100	81.421	ENSFHEG00000016954	imp3	100	81.421	Fundulus_heteroclitus
ENSLACG00000022148	imp3	100	80.874	ENSGMOG00000018162	imp3	100	80.874	Gadus_morhua
ENSLACG00000022148	imp3	100	58.919	ENSGALG00000040238	IMP3	100	60.541	Gallus_gallus
ENSLACG00000022148	imp3	100	81.421	ENSGAFG00000007425	imp3	100	81.421	Gambusia_affinis
ENSLACG00000022148	imp3	100	81.421	ENSGACG00000015998	imp3	100	81.421	Gasterosteus_aculeatus
ENSLACG00000022148	imp3	100	68.649	ENSGAGG00000008163	IMP3	100	68.649	Gopherus_agassizii
ENSLACG00000022148	imp3	100	73.913	ENSGGOG00000025122	IMP3	100	73.913	Gorilla_gorilla
ENSLACG00000022148	imp3	100	83.607	ENSHBUG00000018453	imp3	100	83.607	Haplochromis_burtoni
ENSLACG00000022148	imp3	100	74.457	ENSHGLG00000019824	IMP3	100	74.457	Heterocephalus_glaber_female
ENSLACG00000022148	imp3	100	74.457	ENSHGLG00100020660	IMP3	100	74.457	Heterocephalus_glaber_male
ENSLACG00000022148	imp3	100	80.328	ENSHCOG00000020565	imp3	100	80.328	Hippocampus_comes
ENSLACG00000022148	imp3	100	81.421	ENSIPUG00000013142	imp3	100	81.421	Ictalurus_punctatus
ENSLACG00000022148	imp3	100	75.000	ENSSTOG00000030143	IMP3	100	75.000	Ictidomys_tridecemlineatus
ENSLACG00000022148	imp3	100	80.874	ENSKMAG00000001956	imp3	100	80.874	Kryptolebias_marmoratus
ENSLACG00000022148	imp3	100	78.689	ENSLBEG00000008178	imp3	100	78.689	Labrus_bergylta
ENSLACG00000022148	imp3	100	81.421	ENSLOCG00000010237	imp3	100	81.421	Lepisosteus_oculatus
ENSLACG00000022148	imp3	100	73.370	ENSLAFG00000004425	IMP3	100	73.370	Loxodonta_africana
ENSLACG00000022148	imp3	100	73.913	ENSMFAG00000008867	IMP3	100	73.913	Macaca_fascicularis
ENSLACG00000022148	imp3	100	73.913	ENSMMUG00000016103	IMP3	100	73.913	Macaca_mulatta
ENSLACG00000022148	imp3	100	73.913	ENSMNEG00000026328	IMP3	100	73.913	Macaca_nemestrina
ENSLACG00000022148	imp3	100	82.514	ENSMAMG00000003215	imp3	100	82.514	Mastacembelus_armatus
ENSLACG00000022148	imp3	100	84.153	ENSMZEG00005005544	imp3	100	84.153	Maylandia_zebra
ENSLACG00000022148	imp3	100	73.913	ENSMAUG00000010279	Imp3	100	73.913	Mesocricetus_auratus
ENSLACG00000022148	imp3	100	74.457	ENSMICG00000044149	IMP3	100	74.457	Microcebus_murinus
ENSLACG00000022148	imp3	100	74.457	ENSMOCG00000008647	Imp3	100	74.457	Microtus_ochrogaster
ENSLACG00000022148	imp3	96	84.000	ENSMMOG00000018117	imp3	84	84.000	Mola_mola
ENSLACG00000022148	imp3	100	71.739	ENSMODG00000025193	IMP3	100	71.739	Monodelphis_domestica
ENSLACG00000022148	imp3	100	81.967	ENSMALG00000006505	imp3	100	81.967	Monopterus_albus
ENSLACG00000022148	imp3	100	74.457	MGP_CAROLIEiJ_G0032258	Imp3	100	74.457	Mus_caroli
ENSLACG00000022148	imp3	100	75.000	ENSMUSG00000032288	Imp3	100	75.000	Mus_musculus
ENSLACG00000022148	imp3	100	74.457	MGP_PahariEiJ_G0015125	Imp3	100	74.457	Mus_pahari
ENSLACG00000022148	imp3	100	75.000	MGP_SPRETEiJ_G0033398	Imp3	100	75.000	Mus_spretus
ENSLACG00000022148	imp3	100	73.913	ENSMPUG00000020147	IMP3	100	73.913	Mustela_putorius_furo
ENSLACG00000022148	imp3	100	75.000	ENSMLUG00000014032	IMP3	100	75.000	Myotis_lucifugus
ENSLACG00000022148	imp3	100	72.283	ENSNGAG00000017248	Imp3	100	72.283	Nannospalax_galili
ENSLACG00000022148	imp3	100	83.060	ENSNBRG00000004060	imp3	100	83.060	Neolamprologus_brichardi
ENSLACG00000022148	imp3	100	75.543	ENSOPRG00000015906	-	100	75.543	Ochotona_princeps
ENSLACG00000022148	imp3	100	75.000	ENSODEG00000020194	IMP3	100	75.000	Octodon_degus
ENSLACG00000022148	imp3	100	81.967	ENSONIG00000010661	imp3	100	81.967	Oreochromis_niloticus
ENSLACG00000022148	imp3	100	74.457	ENSOCUG00000004690	IMP3	100	74.457	Oryctolagus_cuniculus
ENSLACG00000022148	imp3	100	79.235	ENSORLG00000004484	imp3	100	79.235	Oryzias_latipes
ENSLACG00000022148	imp3	100	79.235	ENSORLG00020003771	imp3	100	79.235	Oryzias_latipes_hni
ENSLACG00000022148	imp3	100	78.689	ENSORLG00015006933	imp3	100	78.689	Oryzias_latipes_hsok
ENSLACG00000022148	imp3	100	80.328	ENSOMEG00000016160	imp3	100	80.328	Oryzias_melastigma
ENSLACG00000022148	imp3	100	74.457	ENSOGAG00000004917	IMP3	100	74.457	Otolemur_garnettii
ENSLACG00000022148	imp3	100	73.913	ENSPPAG00000009241	IMP3	100	73.913	Pan_paniscus
ENSLACG00000022148	imp3	100	74.457	ENSPPRG00000018701	IMP3	100	74.457	Panthera_pardus
ENSLACG00000022148	imp3	100	73.913	ENSPTRG00000052235	IMP3	100	73.913	Pan_troglodytes
ENSLACG00000022148	imp3	100	73.913	ENSPANG00000013668	IMP3	100	73.913	Papio_anubis
ENSLACG00000022148	imp3	100	81.421	ENSPKIG00000007169	imp3	100	81.421	Paramormyrops_kingsleyae
ENSLACG00000022148	imp3	100	73.118	ENSPMGG00000009379	imp3	100	73.118	Periophthalmus_magnuspinnatus
ENSLACG00000022148	imp3	100	74.457	ENSPEMG00000013003	Imp3	100	74.457	Peromyscus_maniculatus_bairdii
ENSLACG00000022148	imp3	100	82.514	ENSPFOG00000016529	imp3	100	82.514	Poecilia_formosa
ENSLACG00000022148	imp3	100	81.967	ENSPLAG00000013831	imp3	100	81.967	Poecilia_latipinna
ENSLACG00000022148	imp3	100	81.967	ENSPMEG00000000797	imp3	100	81.967	Poecilia_mexicana
ENSLACG00000022148	imp3	100	81.421	ENSPREG00000006885	imp3	100	81.421	Poecilia_reticulata
ENSLACG00000022148	imp3	100	73.913	ENSPPYG00000006664	IMP3	100	73.913	Pongo_abelii
ENSLACG00000022148	imp3	100	73.370	ENSPCAG00000006920	IMP3	100	73.370	Procavia_capensis
ENSLACG00000022148	imp3	100	74.457	ENSPCOG00000012367	IMP3	100	74.457	Propithecus_coquereli
ENSLACG00000022148	imp3	100	75.543	ENSPVAG00000010036	IMP3	100	75.543	Pteropus_vampyrus
ENSLACG00000022148	imp3	100	84.153	ENSPNYG00000000324	imp3	100	84.153	Pundamilia_nyererei
ENSLACG00000022148	imp3	100	82.514	ENSPNAG00000017113	imp3	100	82.514	Pygocentrus_nattereri
ENSLACG00000022148	imp3	100	74.457	ENSRNOG00000017460	Imp3	100	74.457	Rattus_norvegicus
ENSLACG00000022148	imp3	100	73.370	ENSRBIG00000024522	IMP3	100	73.370	Rhinopithecus_bieti
ENSLACG00000022148	imp3	100	73.370	ENSRROG00000024157	IMP3	100	73.370	Rhinopithecus_roxellana
ENSLACG00000022148	imp3	99	53.005	YHR148W	-	100	53.005	Saccharomyces_cerevisiae
ENSLACG00000022148	imp3	100	73.913	ENSSBOG00000006542	-	100	73.913	Saimiri_boliviensis_boliviensis
ENSLACG00000022148	imp3	99	63.736	ENSSBOG00000026404	-	99	63.736	Saimiri_boliviensis_boliviensis
ENSLACG00000022148	imp3	99	69.780	ENSSHAG00000006200	IMP3	99	69.780	Sarcophilus_harrisii
ENSLACG00000022148	imp3	100	84.699	ENSSFOG00015012483	imp3	100	84.699	Scleropages_formosus
ENSLACG00000022148	imp3	100	80.874	ENSSMAG00000007865	imp3	100	80.874	Scophthalmus_maximus
ENSLACG00000022148	imp3	100	82.514	ENSSDUG00000010594	imp3	100	82.514	Seriola_dumerili
ENSLACG00000022148	imp3	100	81.421	ENSSLDG00000015587	imp3	100	81.421	Seriola_lalandi_dorsalis
ENSLACG00000022148	imp3	100	75.000	ENSSARG00000009657	IMP3	100	75.000	Sorex_araneus
ENSLACG00000022148	imp3	100	83.060	ENSSPAG00000002088	imp3	100	83.060	Stegastes_partitus
ENSLACG00000022148	imp3	100	57.297	ENSTGUG00000013228	IMP3	100	58.919	Taeniopygia_guttata
ENSLACG00000022148	imp3	99	81.319	ENSTRUG00000025783	imp3	99	81.319	Takifugu_rubripes
ENSLACG00000022148	imp3	100	75.000	ENSUAMG00000022724	IMP3	100	75.000	Ursus_americanus
ENSLACG00000022148	imp3	100	75.000	ENSUMAG00000003736	IMP3	100	75.000	Ursus_maritimus
ENSLACG00000022148	imp3	100	72.826	ENSVVUG00000019589	IMP3	100	72.826	Vulpes_vulpes
ENSLACG00000022148	imp3	96	80.571	ENSXCOG00000007392	imp3	96	80.571	Xiphophorus_couchianus
ENSLACG00000022148	imp3	100	81.421	ENSXMAG00000023049	imp3	100	81.421	Xiphophorus_maculatus