EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000022167 (Gene tree)
Gene ID: 102347971
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 27340 bases
Position: chrJH126941.1:375827-403166
Accession: 102347971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023359	RRM_1	PF00076.22	1e-56	1	4
ENSLACP00000023359	RRM_1	PF00076.22	1e-56	2	4
ENSLACP00000023359	RRM_1	PF00076.22	1e-56	3	4
ENSLACP00000023359	RRM_1	PF00076.22	1e-56	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000026309	-	1700	XM_005997349	ENSLACP00000023359	470 (aa)	XP_005997411	M3XKV3

Gene Model

Click here to download ENSLACG00000022167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000022167	-	75	30.682	ENSLACG00000004395	PABPC1	57	30.682
ENSLACG00000022167	-	81	59.737	ENSLACG00000009328	ncl	69	58.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022167	-	79	52.674	ENSAPOG00000023888	ncl	60	51.970	Acanthochromis_polyacanthus
ENSLACG00000022167	-	87	35.363	ENSAPOG00000014534	-	67	35.354	Acanthochromis_polyacanthus
ENSLACG00000022167	-	79	52.815	ENSACIG00000013234	ncl	67	51.225	Amphilophus_citrinellus
ENSLACG00000022167	-	87	35.225	ENSAOCG00000014792	-	61	35.714	Amphiprion_ocellaris
ENSLACG00000022167	-	79	52.941	ENSAOCG00000003133	ncl	56	51.238	Amphiprion_ocellaris
ENSLACG00000022167	-	79	52.941	ENSAPEG00000002769	ncl	67	52.591	Amphiprion_percula
ENSLACG00000022167	-	87	35.225	ENSAPEG00000013612	-	61	35.714	Amphiprion_percula
ENSLACG00000022167	-	79	54.545	ENSATEG00000013343	ncl	57	52.854	Anabas_testudineus
ENSLACG00000022167	-	91	37.826	ENSATEG00000019862	-	83	38.780	Anabas_testudineus
ENSLACG00000022167	-	81	50.000	ENSAPLG00000012897	-	64	51.151	Anas_platyrhynchos
ENSLACG00000022167	-	80	51.163	ENSACAG00000001006	-	63	47.198	Anolis_carolinensis
ENSLACG00000022167	-	65	52.614	ENSACLG00000026031	ncl	87	52.147	Astatotilapia_calliptera
ENSLACG00000022167	-	79	48.128	ENSAMXG00000001647	ncl	81	50.162	Astyanax_mexicanus
ENSLACG00000022167	-	67	45.982	ENSCHIG00000003401	-	51	45.982	Capra_hircus
ENSLACG00000022167	-	74	36.705	ENSCHIG00000012665	-	55	35.459	Capra_hircus
ENSLACG00000022167	-	80	52.865	ENSCPBG00000016444	-	58	52.273	Chrysemys_picta_bellii
ENSLACG00000022167	-	82	52.663	ENSCSEG00000015089	ncl	66	50.646	Cynoglossus_semilaevis
ENSLACG00000022167	-	76	54.213	ENSCVAG00000012600	ncl	58	51.870	Cyprinodon_variegatus
ENSLACG00000022167	-	79	54.667	ENSDARG00000002710	ncl	80	57.325	Danio_rerio
ENSLACG00000022167	-	77	38.630	ENSDNOG00000040257	-	66	37.940	Dasypus_novemcinctus
ENSLACG00000022167	-	79	39.628	ENSDNOG00000031611	-	85	38.765	Dasypus_novemcinctus
ENSLACG00000022167	-	84	41.320	ENSEBUG00000016173	ncl	58	40.444	Eptatretus_burgeri
ENSLACG00000022167	-	76	52.603	ENSELUG00000006033	ncl	64	49.497	Esox_lucius
ENSLACG00000022167	-	83	45.038	ENSELUG00000022826	-	80	46.237	Esox_lucius
ENSLACG00000022167	-	80	50.130	ENSFALG00000007592	-	57	49.377	Ficedula_albicollis
ENSLACG00000022167	-	79	52.279	ENSFHEG00000018000	ncl	74	47.541	Fundulus_heteroclitus
ENSLACG00000022167	-	83	51.399	ENSGMOG00000001341	ncl	64	51.338	Gadus_morhua
ENSLACG00000022167	-	80	52.368	ENSGALG00000032930	NCL	57	51.515	Gallus_gallus
ENSLACG00000022167	-	76	55.556	ENSGAFG00000015375	ncl	52	54.242	Gambusia_affinis
ENSLACG00000022167	-	80	52.800	ENSGACG00000008970	ncl	75	52.507	Gasterosteus_aculeatus
ENSLACG00000022167	-	80	51.421	ENSGAGG00000013330	-	61	50.119	Gopherus_agassizii
ENSLACG00000022167	-	79	52.547	ENSHBUG00000006869	ncl	59	51.699	Haplochromis_burtoni
ENSLACG00000022167	-	76	54.848	ENSHCOG00000010234	ncl	58	50.847	Hippocampus_comes
ENSLACG00000022167	-	65	54.426	ENSIPUG00000024556	ncl	78	53.871	Ictalurus_punctatus
ENSLACG00000022167	-	79	52.957	ENSKMAG00000008111	ncl	70	50.704	Kryptolebias_marmoratus
ENSLACG00000022167	-	77	39.733	ENSLBEG00000014278	-	79	40.169	Labrus_bergylta
ENSLACG00000022167	-	85	40.338	ENSLBEG00000007915	-	70	39.904	Labrus_bergylta
ENSLACG00000022167	-	79	52.291	ENSLBEG00000019073	ncl	60	50.370	Labrus_bergylta
ENSLACG00000022167	-	76	52.514	ENSLOCG00000004828	ncl	53	51.010	Lepisosteus_oculatus
ENSLACG00000022167	-	84	37.073	ENSMAMG00000003479	-	71	36.802	Mastacembelus_armatus
ENSLACG00000022167	-	79	53.743	ENSMAMG00000002086	ncl	50	51.435	Mastacembelus_armatus
ENSLACG00000022167	-	79	52.547	ENSMZEG00005017438	ncl	58	51.100	Maylandia_zebra
ENSLACG00000022167	-	77	51.622	ENSMGAG00000008147	-	81	56.000	Meleagris_gallopavo
ENSLACG00000022167	-	65	54.902	ENSMMOG00000008553	ncl	81	55.049	Mola_mola
ENSLACG00000022167	-	79	49.871	ENSMODG00000002470	-	70	48.768	Monodelphis_domestica
ENSLACG00000022167	-	83	52.125	ENSMALG00000014827	ncl	61	51.026	Monopterus_albus
ENSLACG00000022167	-	74	36.570	ENSMPUG00000001663	-	57	36.246	Mustela_putorius_furo
ENSLACG00000022167	-	60	54.804	ENSNBRG00000000146	-	88	54.153	Neolamprologus_brichardi
ENSLACG00000022167	-	60	54.804	ENSNBRG00000001232	ncl	84	54.153	Neolamprologus_brichardi
ENSLACG00000022167	-	79	49.086	ENSMEUG00000012335	-	57	48.000	Notamacropus_eugenii
ENSLACG00000022167	-	79	52.547	ENSONIG00000012508	ncl	60	50.465	Oreochromis_niloticus
ENSLACG00000022167	-	80	37.209	ENSONIG00000010631	-	97	37.209	Oreochromis_niloticus
ENSLACG00000022167	-	80	51.169	ENSOANG00000008732	-	72	51.010	Ornithorhynchus_anatinus
ENSLACG00000022167	-	76	51.821	ENSORLG00000007055	ncl	54	49.242	Oryzias_latipes
ENSLACG00000022167	-	80	33.419	ENSORLG00000004645	-	80	34.225	Oryzias_latipes
ENSLACG00000022167	-	80	33.933	ENSORLG00020003497	-	72	34.759	Oryzias_latipes_hni
ENSLACG00000022167	-	76	51.821	ENSORLG00020017943	ncl	54	49.242	Oryzias_latipes_hni
ENSLACG00000022167	-	80	34.103	ENSORLG00015006613	-	74	34.667	Oryzias_latipes_hsok
ENSLACG00000022167	-	76	50.281	ENSORLG00015013815	ncl	85	52.381	Oryzias_latipes_hsok
ENSLACG00000022167	-	83	35.697	ENSOMEG00000015864	-	84	35.623	Oryzias_melastigma
ENSLACG00000022167	-	76	52.661	ENSOMEG00000020786	ncl	57	50.356	Oryzias_melastigma
ENSLACG00000022167	-	79	53.457	ENSPKIG00000002604	ncl	58	52.300	Paramormyrops_kingsleyae
ENSLACG00000022167	-	86	51.680	ENSPSIG00000002361	-	66	50.244	Pelodiscus_sinensis
ENSLACG00000022167	-	79	51.323	ENSPMGG00000004709	ncl	80	53.846	Periophthalmus_magnuspinnatus
ENSLACG00000022167	-	79	48.469	ENSPCIG00000003293	-	66	47.031	Phascolarctos_cinereus
ENSLACG00000022167	-	76	54.167	ENSPFOG00000024205	ncl	54	51.861	Poecilia_formosa
ENSLACG00000022167	-	76	54.167	ENSPLAG00000024026	ncl	54	52.369	Poecilia_latipinna
ENSLACG00000022167	-	76	54.167	ENSPMEG00000006000	ncl	52	52.956	Poecilia_mexicana
ENSLACG00000022167	-	79	52.547	ENSPNYG00000020494	ncl	58	51.100	Pundamilia_nyererei
ENSLACG00000022167	-	79	50.266	ENSPNAG00000006192	ncl	59	50.356	Pygocentrus_nattereri
ENSLACG00000022167	-	86	45.833	ENSSHAG00000007489	-	52	44.681	Sarcophilus_harrisii
ENSLACG00000022167	-	79	46.457	ENSSHAG00000002702	-	78	44.976	Sarcophilus_harrisii
ENSLACG00000022167	-	69	42.121	ENSSFOG00015013153	-	76	42.395	Scleropages_formosus
ENSLACG00000022167	-	79	55.733	ENSSFOG00015008583	ncl	60	54.847	Scleropages_formosus
ENSLACG00000022167	-	83	40.148	ENSSMAG00000007582	-	63	40.100	Scophthalmus_maximus
ENSLACG00000022167	-	83	50.125	ENSSMAG00000021241	ncl	60	50.236	Scophthalmus_maximus
ENSLACG00000022167	-	79	54.011	ENSSDUG00000006128	ncl	84	53.887	Seriola_dumerili
ENSLACG00000022167	-	84	41.063	ENSSDUG00000010922	-	71	41.414	Seriola_dumerili
ENSLACG00000022167	-	81	40.704	ENSSLDG00000015784	-	63	41.053	Seriola_lalandi_dorsalis
ENSLACG00000022167	-	79	54.545	ENSSLDG00000002012	ncl	55	53.985	Seriola_lalandi_dorsalis
ENSLACG00000022167	-	80	51.134	ENSSPUG00000008244	-	76	50.605	Sphenodon_punctatus
ENSLACG00000022167	-	60	54.064	ENSSPAG00000002637	ncl	78	53.873	Stegastes_partitus
ENSLACG00000022167	-	87	37.170	ENSSPAG00000001859	-	61	37.696	Stegastes_partitus
ENSLACG00000022167	-	80	50.914	ENSTGUG00000009782	-	62	50.253	Taeniopygia_guttata
ENSLACG00000022167	-	76	54.722	ENSTRUG00000008185	ncl	74	52.972	Takifugu_rubripes
ENSLACG00000022167	-	76	55.153	ENSTNIG00000012186	ncl	62	53.704	Tetraodon_nigroviridis
ENSLACG00000022167	-	79	55.585	ENSXETG00000009517	ncl	54	55.118	Xenopus_tropicalis
ENSLACG00000022167	-	79	37.008	ENSXCOG00000007369	-	94	37.008	Xiphophorus_couchianus
ENSLACG00000022167	-	80	39.159	ENSXCOG00000003524	ncl	84	43.590	Xiphophorus_couchianus
ENSLACG00000022167	-	76	54.722	ENSXMAG00000005914	ncl	53	53.333	Xiphophorus_maculatus