EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000022211 (Gene tree)
Gene ID: 102359225
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1719 bases
Position: chrAFYH01283464.1:714-2432
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	1	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	2	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	3	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	4	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	5	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	6	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	7	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	8	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	9	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	10	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	11	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	12	13
ENSLACP00000023217	zf-C2H2	PF00096.26	2.6e-70	13	13
ENSLACP00000023217	zf-met	PF12874.7	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025628	-	1719	-	ENSLACP00000023217	531 (aa)	-	M3XKG1

Gene Model

Click here to download ENSLACG00000022211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000022211	-	78	37.313	ENSLACG00000003588	SCRT1	69	37.313
ENSLACG00000022211	-	80	40.050	ENSLACG00000009642	-	99	40.367
ENSLACG00000022211	-	77	39.803	ENSLACG00000005264	-	99	39.803
ENSLACG00000022211	-	76	37.224	ENSLACG00000009187	PRDM5	80	37.224
ENSLACG00000022211	-	82	33.953	ENSLACG00000007021	ZNF521	99	33.953
ENSLACG00000022211	-	82	38.384	ENSLACG00000009005	-	100	41.379
ENSLACG00000022211	-	99	54.907	ENSLACG00000004191	-	93	54.907
ENSLACG00000022211	-	68	37.374	ENSLACG00000011247	OVOL2	54	37.374
ENSLACG00000022211	-	76	45.370	ENSLACG00000010627	ZNF236	57	43.678
ENSLACG00000022211	-	77	46.914	ENSLACG00000010025	ZNF581	100	46.602
ENSLACG00000022211	-	76	41.634	ENSLACG00000017381	-	99	40.278
ENSLACG00000022211	-	79	50.000	ENSLACG00000011466	ZBTB24	67	37.349
ENSLACG00000022211	-	75	48.000	ENSLACG00000009283	RREB1	60	39.583
ENSLACG00000022211	-	85	38.060	ENSLACG00000017707	SNAI1	78	38.060
ENSLACG00000022211	-	76	36.802	ENSLACG00000007310	-	99	36.802
ENSLACG00000022211	-	74	31.841	ENSLACG00000010161	MAZ	76	32.338
ENSLACG00000022211	-	100	55.331	ENSLACG00000014708	-	93	55.331
ENSLACG00000022211	-	76	46.429	ENSLACG00000014018	-	56	33.721
ENSLACG00000022211	-	76	42.012	ENSLACG00000012207	GFI1B	59	42.012
ENSLACG00000022211	-	74	45.882	ENSLACG00000017590	-	55	45.882
ENSLACG00000022211	-	86	42.105	ENSLACG00000013362	GFI1	63	42.105
ENSLACG00000022211	-	73	38.235	ENSLACG00000005413	snai2	83	38.235
ENSLACG00000022211	-	77	40.686	ENSLACG00000000891	ZNF319	97	40.376
ENSLACG00000022211	-	76	43.860	ENSLACG00000010551	ZFAT	52	43.860
ENSLACG00000022211	-	82	33.520	ENSLACG00000012406	ZNF423	96	33.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022211	-	99	44.248	ENSACAG00000024956	-	99	44.248	Anolis_carolinensis
ENSLACG00000022211	-	76	43.200	ENSACAG00000024898	-	98	40.794	Anolis_carolinensis
ENSLACG00000022211	-	77	55.013	ENSACAG00000008664	-	67	55.013	Anolis_carolinensis
ENSLACG00000022211	-	83	47.514	ENSAMXG00000035246	-	88	47.514	Astyanax_mexicanus
ENSLACG00000022211	-	76	51.493	ENSAMXG00000010805	-	95	51.493	Astyanax_mexicanus
ENSLACG00000022211	-	85	52.792	ENSAMXG00000038325	-	93	52.792	Astyanax_mexicanus
ENSLACG00000022211	-	76	58.125	ENSAMXG00000038636	-	94	58.125	Astyanax_mexicanus
ENSLACG00000022211	-	76	49.107	ENSAMXG00000042784	-	96	49.107	Astyanax_mexicanus
ENSLACG00000022211	-	77	53.140	ENSAMXG00000032841	-	77	53.140	Astyanax_mexicanus
ENSLACG00000022211	-	76	55.061	ENSAMXG00000034344	-	74	55.061	Astyanax_mexicanus
ENSLACG00000022211	-	77	54.062	ENSAMXG00000034847	-	83	54.062	Astyanax_mexicanus
ENSLACG00000022211	-	76	51.929	ENSAMXG00000038536	-	93	51.929	Astyanax_mexicanus
ENSLACG00000022211	-	76	54.270	ENSAMXG00000025452	-	94	54.270	Astyanax_mexicanus
ENSLACG00000022211	-	76	51.335	ENSAMXG00000042746	-	93	51.335	Astyanax_mexicanus
ENSLACG00000022211	-	93	42.675	ENSAMXG00000040198	-	50	42.675	Astyanax_mexicanus
ENSLACG00000022211	-	82	53.962	ENSAMXG00000036233	-	90	53.875	Astyanax_mexicanus
ENSLACG00000022211	-	76	39.910	ENSBTAG00000038322	-	75	39.910	Bos_taurus
ENSLACG00000022211	-	86	46.557	ENSCPBG00000001526	-	92	46.557	Chrysemys_picta_bellii
ENSLACG00000022211	-	77	39.057	ENSCPBG00000013652	-	67	39.057	Chrysemys_picta_bellii
ENSLACG00000022211	-	93	41.700	ENSCPBG00000008580	-	100	42.570	Chrysemys_picta_bellii
ENSLACG00000022211	-	76	54.478	ENSCSAVG00000010960	-	100	54.478	Ciona_savignyi
ENSLACG00000022211	-	84	41.042	ENSDNOG00000047495	-	85	41.042	Dasypus_novemcinctus
ENSLACG00000022211	-	99	51.867	ENSEBUG00000011435	-	98	51.596	Eptatretus_burgeri
ENSLACG00000022211	-	76	54.005	ENSEBUG00000002075	-	77	54.005	Eptatretus_burgeri
ENSLACG00000022211	-	77	42.353	ENSEBUG00000013875	-	79	44.444	Eptatretus_burgeri
ENSLACG00000022211	-	76	50.244	ENSEBUG00000011694	-	95	50.244	Eptatretus_burgeri
ENSLACG00000022211	-	77	45.752	ENSEBUG00000014717	-	77	45.752	Eptatretus_burgeri
ENSLACG00000022211	-	98	52.926	ENSEBUG00000005264	-	92	51.485	Eptatretus_burgeri
ENSLACG00000022211	-	85	50.623	ENSEBUG00000012919	-	84	50.623	Eptatretus_burgeri
ENSLACG00000022211	-	82	47.719	ENSEBUG00000015837	-	78	46.000	Eptatretus_burgeri
ENSLACG00000022211	-	99	52.475	ENSEBUG00000008306	-	99	52.475	Eptatretus_burgeri
ENSLACG00000022211	-	78	38.961	ENSEASG00005004469	-	74	38.961	Equus_asinus_asinus
ENSLACG00000022211	-	76	37.330	ENSGMOG00000018506	-	100	37.433	Gadus_morhua
ENSLACG00000022211	-	78	52.089	ENSGALG00000055127	-	72	52.089	Gallus_gallus
ENSLACG00000022211	-	98	54.091	ENSGALG00000044069	-	81	54.091	Gallus_gallus
ENSLACG00000022211	-	99	52.422	ENSGALG00000053507	-	99	52.422	Gallus_gallus
ENSLACG00000022211	-	76	51.759	ENSGALG00000054325	-	97	51.759	Gallus_gallus
ENSLACG00000022211	-	91	44.961	ENSGALG00000049609	-	66	44.961	Gallus_gallus
ENSLACG00000022211	-	78	51.495	ENSGALG00000046336	-	98	51.495	Gallus_gallus
ENSLACG00000022211	-	76	48.485	ENSGACG00000006283	-	87	46.429	Gasterosteus_aculeatus
ENSLACG00000022211	-	84	51.389	ENSGAGG00000018885	-	73	51.389	Gopherus_agassizii
ENSLACG00000022211	-	77	47.647	ENSGAGG00000011366	-	99	48.571	Gopherus_agassizii
ENSLACG00000022211	-	86	51.031	ENSGAGG00000011399	-	98	51.031	Gopherus_agassizii
ENSLACG00000022211	-	76	40.191	ENSHCOG00000018201	-	95	38.415	Hippocampus_comes
ENSLACG00000022211	-	83	58.065	ENSIPUG00000015468	-	99	54.950	Ictalurus_punctatus
ENSLACG00000022211	-	78	51.567	ENSIPUG00000021515	-	95	51.567	Ictalurus_punctatus
ENSLACG00000022211	-	77	37.386	ENSIPUG00000012109	ZN12	51	37.500	Ictalurus_punctatus
ENSLACG00000022211	-	76	40.860	ENSJJAG00000023633	Zfp672	88	41.489	Jaculus_jaculus
ENSLACG00000022211	-	76	44.444	ENSLOCG00000017864	-	99	44.444	Lepisosteus_oculatus
ENSLACG00000022211	-	78	53.372	ENSMGAG00000013362	-	100	53.372	Meleagris_gallopavo
ENSLACG00000022211	-	76	40.608	ENSMAUG00000009945	Zfp672	88	41.489	Mesocricetus_auratus
ENSLACG00000022211	-	76	46.602	ENSMMOG00000003923	-	87	46.602	Mola_mola
ENSLACG00000022211	-	77	37.461	ENSMODG00000014052	-	100	36.486	Monodelphis_domestica
ENSLACG00000022211	-	99	42.857	ENSMODG00000010532	-	99	42.857	Monodelphis_domestica
ENSLACG00000022211	-	98	45.693	ENSMODG00000001880	-	98	45.693	Monodelphis_domestica
ENSLACG00000022211	-	76	40.385	MGP_CAROLIEiJ_G0016391	Zfp672	90	41.489	Mus_caroli
ENSLACG00000022211	-	98	44.706	MGP_CAROLIEiJ_G0030502	-	93	44.706	Mus_caroli
ENSLACG00000022211	-	87	40.110	ENSMUSG00000049755	Zfp672	90	41.026	Mus_musculus
ENSLACG00000022211	-	98	42.222	ENSMUSG00000030823	9130019O22Rik	90	42.222	Mus_musculus
ENSLACG00000022211	-	76	45.045	MGP_SPRETEiJ_G0031613	-	87	45.045	Mus_spretus
ENSLACG00000022211	-	87	40.110	MGP_SPRETEiJ_G0017233	Zfp672	90	41.250	Mus_spretus
ENSLACG00000022211	-	98	51.316	ENSNGAG00000015777	Zim1	93	34.351	Nannospalax_galili
ENSLACG00000022211	-	85	42.529	ENSNBRG00000007276	-	65	42.529	Neolamprologus_brichardi
ENSLACG00000022211	-	76	40.401	ENSNBRG00000000708	-	88	40.401	Neolamprologus_brichardi
ENSLACG00000022211	-	83	47.899	ENSORLG00020001922	-	86	45.113	Oryzias_latipes_hni
ENSLACG00000022211	-	74	48.760	ENSOMEG00000001598	-	66	48.760	Oryzias_melastigma
ENSLACG00000022211	-	98	48.250	ENSPSIG00000010248	-	93	48.250	Pelodiscus_sinensis
ENSLACG00000022211	-	98	41.276	ENSPSIG00000016380	-	96	41.276	Pelodiscus_sinensis
ENSLACG00000022211	-	76	50.311	ENSPSIG00000006790	-	91	51.282	Pelodiscus_sinensis
ENSLACG00000022211	-	77	49.853	ENSPSIG00000012650	-	78	48.684	Pelodiscus_sinensis
ENSLACG00000022211	-	78	47.059	ENSPSIG00000000672	-	91	47.059	Pelodiscus_sinensis
ENSLACG00000022211	-	98	49.580	ENSPSIG00000004502	-	93	49.580	Pelodiscus_sinensis
ENSLACG00000022211	-	74	46.786	ENSPSIG00000005672	-	73	46.786	Pelodiscus_sinensis
ENSLACG00000022211	-	99	43.131	ENSPSIG00000010328	-	97	43.131	Pelodiscus_sinensis
ENSLACG00000022211	-	98	52.406	ENSPSIG00000013021	-	97	52.406	Pelodiscus_sinensis
ENSLACG00000022211	-	98	46.705	ENSPSIG00000005603	-	95	46.705	Pelodiscus_sinensis
ENSLACG00000022211	-	98	48.421	ENSPSIG00000015459	-	96	48.421	Pelodiscus_sinensis
ENSLACG00000022211	-	98	48.608	ENSPSIG00000003152	-	96	48.571	Pelodiscus_sinensis
ENSLACG00000022211	-	77	39.601	ENSPSIG00000006586	-	99	39.601	Pelodiscus_sinensis
ENSLACG00000022211	-	77	46.062	ENSPREG00000002642	-	92	43.846	Poecilia_reticulata
ENSLACG00000022211	-	85	47.500	ENSPNYG00000015486	-	75	47.500	Pundamilia_nyererei
ENSLACG00000022211	-	76	54.450	ENSPNAG00000000088	-	81	54.450	Pygocentrus_nattereri
ENSLACG00000022211	-	63	51.010	ENSPNAG00000018395	-	62	51.010	Pygocentrus_nattereri
ENSLACG00000022211	-	76	40.934	ENSRNOG00000002713	Zfp672	90	41.489	Rattus_norvegicus
ENSLACG00000022211	-	98	43.603	ENSSHAG00000018106	-	99	43.603	Sarcophilus_harrisii
ENSLACG00000022211	-	79	53.964	ENSSFOG00015019818	-	81	51.360	Scleropages_formosus
ENSLACG00000022211	-	76	38.310	ENSSMAG00000004252	-	86	37.845	Scophthalmus_maximus
ENSLACG00000022211	-	82	53.812	ENSSPUG00000004366	-	61	53.812	Sphenodon_punctatus
ENSLACG00000022211	-	84	52.488	ENSSPUG00000010016	-	97	52.488	Sphenodon_punctatus
ENSLACG00000022211	-	74	45.783	ENSSPAG00000021653	-	92	45.783	Stegastes_partitus
ENSLACG00000022211	-	78	51.706	ENSTGUG00000015210	-	100	51.706	Taeniopygia_guttata
ENSLACG00000022211	-	78	50.476	ENSTGUG00000018351	-	100	50.476	Taeniopygia_guttata
ENSLACG00000022211	-	80	40.506	ENSTRUG00000022066	-	88	43.229	Takifugu_rubripes
ENSLACG00000022211	-	77	45.088	ENSXETG00000031192	-	100	45.088	Xenopus_tropicalis
ENSLACG00000022211	-	77	49.231	ENSXCOG00000006553	-	86	49.231	Xiphophorus_couchianus
ENSLACG00000022211	-	76	47.244	ENSXMAG00000026680	-	80	47.244	Xiphophorus_maculatus