EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000022213 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 576 bases
Position: chrJH128796.1:255508-256083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000022079	RVT_1	PF00078.27	6.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025235	-	576	-	ENSLACP00000022079	191 (aa)	-	M3XH73

Gene Model

Click here to download ENSLACG00000022213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000022213	-	90	62.573	ENSLACG00000022505	-	59	62.573
ENSLACG00000022213	-	90	62.573	ENSLACG00000022344	-	68	62.573
ENSLACG00000022213	-	90	61.988	ENSLACG00000022619	-	60	61.988
ENSLACG00000022213	-	95	60.541	ENSLACG00000022236	-	58	62.573
ENSLACG00000022213	-	83	67.722	ENSLACG00000022147	-	66	64.912
ENSLACG00000022213	-	90	62.573	ENSLACG00000022149	-	56	62.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022213	-	65	37.313	ENSACIG00000019349	-	54	38.168	Amphilophus_citrinellus
ENSLACG00000022213	-	61	39.655	ENSAPEG00000008260	-	50	41.525	Amphiprion_percula
ENSLACG00000022213	-	70	38.806	ENSATEG00000024731	-	59	38.806	Anabas_testudineus
ENSLACG00000022213	-	76	36.184	ENSELUG00000019648	-	52	36.184	Esox_lucius
ENSLACG00000022213	-	70	36.567	ENSIPUG00000003714	-	57	36.567	Ictalurus_punctatus
ENSLACG00000022213	-	71	38.971	ENSIPUG00000017481	-	69	38.971	Ictalurus_punctatus
ENSLACG00000022213	-	65	41.129	ENSIPUG00000018566	-	59	41.129	Ictalurus_punctatus
ENSLACG00000022213	-	65	40.323	ENSIPUG00000017577	-	62	40.323	Ictalurus_punctatus
ENSLACG00000022213	-	63	36.885	ENSLBEG00000020214	-	79	35.878	Labrus_bergylta
ENSLACG00000022213	-	65	39.516	ENSMAMG00000016074	-	51	39.516	Mastacembelus_armatus
ENSLACG00000022213	-	55	34.286	ENSMMOG00000010846	-	55	38.554	Mola_mola
ENSLACG00000022213	-	72	37.956	ENSORLG00000024021	-	51	37.956	Oryzias_latipes
ENSLACG00000022213	-	70	36.842	ENSORLG00020002943	-	59	36.090	Oryzias_latipes_hni
ENSLACG00000022213	-	74	37.589	ENSORLG00015022051	-	54	35.811	Oryzias_latipes_hsok
ENSLACG00000022213	-	72	40.146	ENSTRUG00000020404	-	55	40.146	Takifugu_rubripes