EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000022233 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 18700 bases
Position: chrJH126562.1:9965274-9983973
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000022264	ResIII	PF04851.15	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000026042	-	2536	-	ENSLACP00000022264	691 (aa)	-	M3XHQ8

Gene Model

Click here to download ENSLACG00000022233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022233	-	99	88.372	ENSG00000116254	CHD5	58	89.851	Homo_sapiens
ENSLACG00000022233	-	99	88.227	ENSCAFG00000019545	CHD5	60	89.552	Canis_familiaris
ENSLACG00000022233	-	99	88.081	ENSCCAG00000024756	CHD5	59	89.403	Cebus_capucinus
ENSLACG00000022233	-	99	87.500	ENSCGRG00001011042	Chd5	67	88.955	Cricetulus_griseus_chok1gshd
ENSLACG00000022233	-	52	80.939	ENSGAFG00000015359	-	92	80.939	Gambusia_affinis
ENSLACG00000022233	-	99	83.140	ENSGACG00000004389	chd5	61	84.547	Gasterosteus_aculeatus
ENSLACG00000022233	-	99	89.099	ENSGAGG00000001590	CHD5	59	90.299	Gopherus_agassizii
ENSLACG00000022233	-	99	88.372	ENSGGOG00000000708	CHD5	58	89.701	Gorilla_gorilla
ENSLACG00000022233	-	51	78.125	ENSHCOG00000018462	-	77	72.180	Hippocampus_comes
ENSLACG00000022233	-	53	72.554	ENSIPUG00000000057	-	95	72.554	Ictalurus_punctatus
ENSLACG00000022233	-	99	84.761	ENSIPUG00000005446	chd5	61	85.991	Ictalurus_punctatus
ENSLACG00000022233	-	99	88.081	ENSNLEG00000010320	CHD5	58	89.403	Nomascus_leucogenys
ENSLACG00000022233	-	52	77.834	ENSORLG00015005151	-	94	73.256	Oryzias_latipes_hsok
ENSLACG00000022233	-	99	87.936	ENSPEMG00000014799	Chd5	55	89.254	Peromyscus_maniculatus_bairdii
ENSLACG00000022233	-	99	84.302	ENSTNIG00000004346	chd5	67	85.224	Tetraodon_nigroviridis
ENSLACG00000022233	-	99	88.227	ENSUAMG00000024509	CHD5	60	89.552	Ursus_americanus
ENSLACG00000022233	-	99	81.641	ENSUMAG00000024173	CHD5	62	82.739	Ursus_maritimus
ENSLACG00000022233	-	99	84.180	ENSXCOG00000014202	chd5	63	85.395	Xiphophorus_couchianus