EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000022331 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1230 bases
Position: chrJH129118.1:134780-136009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023463	RVT_1	PF00078.27	1.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000026612	-	1230	-	ENSLACP00000023463	332 (aa)	-	M3XL57

Gene Model

Click here to download ENSLACG00000022331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000022331	-	89	85.185	ENSLACG00000022376	-	63	85.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022331	-	54	50.820	ENSAPOG00000015742	-	57	50.820	Acanthochromis_polyacanthus
ENSLACG00000022331	-	59	41.919	ENSACIG00000023684	-	89	41.919	Amphilophus_citrinellus
ENSLACG00000022331	-	72	35.983	ENSACIG00000022447	-	86	35.983	Amphilophus_citrinellus
ENSLACG00000022331	-	80	42.045	ENSAOCG00000004500	-	70	42.045	Amphiprion_ocellaris
ENSLACG00000022331	-	64	48.113	ENSAOCG00000018248	-	83	48.113	Amphiprion_ocellaris
ENSLACG00000022331	-	67	36.681	ENSACAG00000010816	-	65	36.681	Anolis_carolinensis
ENSLACG00000022331	-	94	41.956	ENSACLG00000010837	-	76	41.956	Astatotilapia_calliptera
ENSLACG00000022331	-	70	38.235	ENSACLG00000012369	-	80	38.235	Astatotilapia_calliptera
ENSLACG00000022331	-	93	41.456	ENSACLG00000003896	-	55	41.456	Astatotilapia_calliptera
ENSLACG00000022331	-	81	42.164	ENSAMXG00000040763	-	67	42.164	Astyanax_mexicanus
ENSLACG00000022331	-	85	34.164	ENSCVAG00000000484	-	96	34.164	Cyprinodon_variegatus
ENSLACG00000022331	-	67	47.085	ENSCVAG00000020933	-	56	47.085	Cyprinodon_variegatus
ENSLACG00000022331	-	58	39.896	ENSHBUG00000023598	-	71	39.896	Haplochromis_burtoni
ENSLACG00000022331	-	85	32.069	ENSIPUG00000010242	-	75	32.069	Ictalurus_punctatus
ENSLACG00000022331	-	89	44.407	ENSMZEG00005011529	-	55	44.407	Maylandia_zebra
ENSLACG00000022331	-	94	41.509	ENSMZEG00005006211	-	76	41.509	Maylandia_zebra
ENSLACG00000022331	-	89	44.407	ENSMZEG00005017030	-	55	44.407	Maylandia_zebra
ENSLACG00000022331	-	76	42.857	ENSMMOG00000007110	-	91	42.857	Mola_mola
ENSLACG00000022331	-	77	46.275	ENSMMOG00000003125	-	84	46.275	Mola_mola
ENSLACG00000022331	-	84	43.571	ENSORLG00000028976	-	74	43.571	Oryzias_latipes
ENSLACG00000022331	-	95	41.772	ENSORLG00000028706	-	63	41.772	Oryzias_latipes
ENSLACG00000022331	-	93	42.718	ENSORLG00000030126	-	71	42.718	Oryzias_latipes
ENSLACG00000022331	-	91	38.870	ENSORLG00000024464	-	51	38.870	Oryzias_latipes
ENSLACG00000022331	-	71	46.809	ENSORLG00020007779	-	62	46.809	Oryzias_latipes_hni
ENSLACG00000022331	-	82	46.691	ENSORLG00020014626	-	51	46.691	Oryzias_latipes_hni
ENSLACG00000022331	-	92	42.997	ENSORLG00020010425	-	53	42.997	Oryzias_latipes_hni
ENSLACG00000022331	-	95	41.905	ENSORLG00020016429	-	61	41.905	Oryzias_latipes_hni
ENSLACG00000022331	-	75	45.200	ENSORLG00020018629	-	65	45.200	Oryzias_latipes_hni
ENSLACG00000022331	-	53	48.876	ENSORLG00020022004	-	61	48.876	Oryzias_latipes_hni
ENSLACG00000022331	-	95	41.772	ENSORLG00020017925	-	56	41.772	Oryzias_latipes_hni
ENSLACG00000022331	-	79	44.444	ENSORLG00015007703	-	66	44.444	Oryzias_latipes_hsok
ENSLACG00000022331	-	83	42.391	ENSORLG00015021206	-	57	42.391	Oryzias_latipes_hsok
ENSLACG00000022331	-	88	44.521	ENSORLG00015007976	-	78	44.521	Oryzias_latipes_hsok
ENSLACG00000022331	-	93	41.748	ENSOMEG00000022009	-	66	41.748	Oryzias_melastigma
ENSLACG00000022331	-	72	36.555	ENSOMEG00000008379	-	73	38.235	Oryzias_melastigma
ENSLACG00000022331	-	56	44.920	ENSPKIG00000013511	-	64	44.920	Paramormyrops_kingsleyae
ENSLACG00000022331	-	52	31.792	ENSPMGG00000010004	-	61	31.792	Periophthalmus_magnuspinnatus
ENSLACG00000022331	-	82	40.876	ENSPMEG00000003715	-	92	40.876	Poecilia_mexicana
ENSLACG00000022331	-	91	42.384	ENSPREG00000006501	-	55	42.384	Poecilia_reticulata
ENSLACG00000022331	-	50	38.922	ENSPNYG00000000591	-	76	38.922	Pundamilia_nyererei
ENSLACG00000022331	-	50	38.922	ENSPNYG00000022953	-	73	38.922	Pundamilia_nyererei
ENSLACG00000022331	-	80	42.803	ENSPNYG00000012547	-	86	42.803	Pundamilia_nyererei
ENSLACG00000022331	-	88	41.980	ENSPNAG00000014375	-	71	41.980	Pygocentrus_nattereri
ENSLACG00000022331	-	62	38.164	ENSSLDG00000008400	-	85	38.164	Seriola_lalandi_dorsalis
ENSLACG00000022331	-	72	44.583	ENSSPAG00000000151	-	52	44.583	Stegastes_partitus
ENSLACG00000022331	-	72	32.645	ENSXETG00000031743	-	96	32.645	Xenopus_tropicalis