EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000022376 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1489 bases
Position: chrJH127212.1:159324-160812
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023500	RVT_1	PF00078.27	4.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000026313	-	1489	-	ENSLACP00000023500	470 (aa)	-	M3XL94

Gene Model

Click here to download ENSLACG00000022376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000022376	-	63	85.185	ENSLACG00000022331	-	89	85.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022376	-	51	33.054	ENSACIG00000022447	-	86	33.054	Amphilophus_citrinellus
ENSLACG00000022376	-	99	33.617	ENSAOCG00000013559	-	56	33.617	Amphiprion_ocellaris
ENSLACG00000022376	-	59	39.350	ENSAOCG00000004500	-	74	39.350	Amphiprion_ocellaris
ENSLACG00000022376	-	99	33.192	ENSAOCG00000022482	-	59	33.192	Amphiprion_ocellaris
ENSLACG00000022376	-	98	31.942	ENSAPEG00000015961	-	59	31.942	Amphiprion_percula
ENSLACG00000022376	-	98	31.866	ENSAPEG00000017325	-	51	31.866	Amphiprion_percula
ENSLACG00000022376	-	98	31.942	ENSAPEG00000010007	-	57	31.942	Amphiprion_percula
ENSLACG00000022376	-	99	31.933	ENSACLG00000020885	-	58	31.933	Astatotilapia_calliptera
ENSLACG00000022376	-	95	33.479	ENSACLG00000003896	-	81	33.479	Astatotilapia_calliptera
ENSLACG00000022376	-	99	32.421	ENSACLG00000008786	-	58	32.421	Astatotilapia_calliptera
ENSLACG00000022376	-	61	39.175	ENSACLG00000010837	-	70	39.175	Astatotilapia_calliptera
ENSLACG00000022376	-	50	36.555	ENSACLG00000012369	-	80	36.555	Astatotilapia_calliptera
ENSLACG00000022376	-	99	32.143	ENSACLG00000018473	-	52	32.143	Astatotilapia_calliptera
ENSLACG00000022376	-	99	32.292	ENSACLG00000020106	-	59	32.292	Astatotilapia_calliptera
ENSLACG00000022376	-	99	32.770	ENSACLG00000011463	-	56	32.770	Astatotilapia_calliptera
ENSLACG00000022376	-	51	39.344	ENSAMXG00000040763	-	60	39.344	Astyanax_mexicanus
ENSLACG00000022376	-	60	33.569	ENSCVAG00000000484	-	97	33.569	Cyprinodon_variegatus
ENSLACG00000022376	-	99	30.361	ENSDARG00000086420	CABZ01046949.1	59	30.361	Danio_rerio
ENSLACG00000022376	-	54	30.798	ENSIPUG00000010242	-	68	30.798	Ictalurus_punctatus
ENSLACG00000022376	-	99	31.478	ENSKMAG00000015838	-	53	31.478	Kryptolebias_marmoratus
ENSLACG00000022376	-	99	32.415	ENSKMAG00000014872	-	56	32.415	Kryptolebias_marmoratus
ENSLACG00000022376	-	100	37.895	ENSKMAG00000015028	-	59	37.895	Kryptolebias_marmoratus
ENSLACG00000022376	-	99	32.403	ENSMZEG00005012878	-	59	32.403	Maylandia_zebra
ENSLACG00000022376	-	61	38.356	ENSMZEG00005006211	-	70	38.356	Maylandia_zebra
ENSLACG00000022376	-	99	31.933	ENSMZEG00005015509	-	58	31.933	Maylandia_zebra
ENSLACG00000022376	-	54	44.706	ENSMMOG00000003125	-	84	44.706	Mola_mola
ENSLACG00000022376	-	54	41.502	ENSMMOG00000007110	-	92	41.502	Mola_mola
ENSLACG00000022376	-	99	32.000	ENSORLG00000028121	-	54	32.000	Oryzias_latipes
ENSLACG00000022376	-	98	32.278	ENSORLG00000027545	-	57	32.278	Oryzias_latipes
ENSLACG00000022376	-	99	34.322	ENSORLG00000024714	-	53	34.322	Oryzias_latipes
ENSLACG00000022376	-	99	32.347	ENSORLG00000023575	-	59	32.347	Oryzias_latipes
ENSLACG00000022376	-	99	31.237	ENSORLG00000027043	-	52	31.237	Oryzias_latipes
ENSLACG00000022376	-	99	32.075	ENSORLG00000026318	-	54	32.075	Oryzias_latipes
ENSLACG00000022376	-	99	32.347	ENSORLG00000025323	-	54	32.347	Oryzias_latipes
ENSLACG00000022376	-	98	32.068	ENSORLG00000029714	-	54	32.068	Oryzias_latipes
ENSLACG00000022376	-	99	32.347	ENSORLG00000025901	-	57	32.347	Oryzias_latipes
ENSLACG00000022376	-	85	34.559	ENSORLG00000030126	-	92	34.559	Oryzias_latipes
ENSLACG00000022376	-	99	32.558	ENSORLG00000025260	-	59	32.558	Oryzias_latipes
ENSLACG00000022376	-	70	36.283	ENSORLG00000028706	-	66	36.283	Oryzias_latipes
ENSLACG00000022376	-	55	41.154	ENSORLG00000028976	-	68	41.154	Oryzias_latipes
ENSLACG00000022376	-	86	32.195	ENSORLG00000030415	-	51	32.195	Oryzias_latipes
ENSLACG00000022376	-	99	31.866	ENSORLG00000025476	-	56	31.866	Oryzias_latipes
ENSLACG00000022376	-	99	31.656	ENSORLG00000024437	-	54	31.656	Oryzias_latipes
ENSLACG00000022376	-	99	32.347	ENSORLG00000029308	-	51	32.347	Oryzias_latipes
ENSLACG00000022376	-	98	31.857	ENSORLG00000024972	-	50	31.857	Oryzias_latipes
ENSLACG00000022376	-	98	32.340	ENSORLG00000029071	-	68	32.340	Oryzias_latipes
ENSLACG00000022376	-	99	32.558	ENSORLG00000029928	-	70	32.558	Oryzias_latipes
ENSLACG00000022376	-	99	34.672	ENSORLG00020010757	-	56	34.672	Oryzias_latipes_hni
ENSLACG00000022376	-	99	32.347	ENSORLG00020013149	-	51	32.347	Oryzias_latipes_hni
ENSLACG00000022376	-	99	32.292	ENSORLG00020001651	-	54	32.292	Oryzias_latipes_hni
ENSLACG00000022376	-	99	32.347	ENSORLG00020004271	-	68	32.347	Oryzias_latipes_hni
ENSLACG00000022376	-	86	34.140	ENSORLG00020010425	-	71	34.140	Oryzias_latipes_hni
ENSLACG00000022376	-	84	33.498	ENSORLG00020016429	-	77	33.498	Oryzias_latipes_hni
ENSLACG00000022376	-	93	32.965	ENSORLG00020017925	-	78	32.965	Oryzias_latipes_hni
ENSLACG00000022376	-	57	42.751	ENSORLG00015007976	-	71	42.751	Oryzias_latipes_hsok
ENSLACG00000022376	-	99	32.285	ENSORLG00015006862	-	59	32.285	Oryzias_latipes_hsok
ENSLACG00000022376	-	99	31.866	ENSORLG00015015728	-	59	31.866	Oryzias_latipes_hsok
ENSLACG00000022376	-	52	41.975	ENSORLG00015021206	-	50	41.975	Oryzias_latipes_hsok
ENSLACG00000022376	-	51	41.129	ENSORLG00015007703	-	61	41.129	Oryzias_latipes_hsok
ENSLACG00000022376	-	93	32.739	ENSOMEG00000022009	-	95	32.739	Oryzias_melastigma
ENSLACG00000022376	-	51	36.134	ENSOMEG00000008379	-	73	37.815	Oryzias_melastigma
ENSLACG00000022376	-	85	31.920	ENSPFOG00000024463	-	51	31.920	Poecilia_formosa
ENSLACG00000022376	-	99	33.402	ENSPMEG00000013148	-	50	33.402	Poecilia_mexicana
ENSLACG00000022376	-	99	30.085	ENSPMEG00000015117	-	54	30.085	Poecilia_mexicana
ENSLACG00000022376	-	58	40.441	ENSPMEG00000003715	-	92	40.441	Poecilia_mexicana
ENSLACG00000022376	-	60	40.845	ENSPNYG00000012547	-	93	40.845	Pundamilia_nyererei
ENSLACG00000022376	-	55	41.154	ENSPNAG00000014375	-	63	41.154	Pygocentrus_nattereri
ENSLACG00000022376	-	51	32.231	ENSXETG00000031743	-	96	32.231	Xenopus_tropicalis
ENSLACG00000022376	-	99	30.737	ENSXMAG00000027569	-	50	30.737	Xiphophorus_maculatus