EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000022678 (Gene tree)
Gene ID: 102365515
Gene Symbol: zgc:56676
Alias: -
Full Name: zgc:56676
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2922 bases
Position: chrJH127643.1:384588-387509
Accession: ZDB-GENE-040426-1109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021892	SUI1	PF01253.22	8.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025386	-	749	-	ENSLACP00000021892	108 (aa)	-	M3XGN6

Gene Model

Click here to download ENSLACG00000022678's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000022678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000022678	zgc:56676	97	83.962	ENSLACG00000004014	-	94	83.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000022678	zgc:56676	97	85.849	ENSG00000114784	EIF1B	94	85.849	Homo_sapiens
ENSLACG00000022678	zgc:56676	97	85.849	ENSAMEG00000001679	EIF1B	94	85.849	Ailuropoda_melanoleuca
ENSLACG00000022678	zgc:56676	97	57.547	ENSACIG00000009618	zgc:56676	87	50.485	Amphilophus_citrinellus
ENSLACG00000022678	zgc:56676	99	85.185	ENSAPLG00000001143	EIF1B	95	85.185	Anas_platyrhynchos
ENSLACG00000022678	zgc:56676	99	83.333	ENSACAG00000017884	EIF1B	100	83.333	Anolis_carolinensis
ENSLACG00000022678	zgc:56676	97	85.849	ENSANAG00000026979	EIF1B	94	85.849	Aotus_nancymaae
ENSLACG00000022678	zgc:56676	97	84.906	ENSAMXG00000033877	zgc:56676	94	86.275	Astyanax_mexicanus
ENSLACG00000022678	zgc:56676	97	85.849	ENSBTAG00000019106	EIF1B	94	85.849	Bos_taurus
ENSLACG00000022678	zgc:56676	99	50.467	WBGene00020868	eif-1	95	50.467	Caenorhabditis_elegans
ENSLACG00000022678	zgc:56676	97	85.849	ENSCJAG00000046513	EIF1B	94	85.849	Callithrix_jacchus
ENSLACG00000022678	zgc:56676	55	76.667	ENSCAFG00000029183	EIF1B	70	81.250	Canis_familiaris
ENSLACG00000022678	zgc:56676	97	85.849	ENSCAFG00020025518	EIF1B	94	85.849	Canis_lupus_dingo
ENSLACG00000022678	zgc:56676	97	85.849	ENSTSYG00000006338	EIF1B	94	85.849	Carlito_syrichta
ENSLACG00000022678	zgc:56676	97	85.849	ENSCPOG00000035400	EIF1B	94	85.849	Cavia_porcellus
ENSLACG00000022678	zgc:56676	97	85.849	ENSCCAG00000031083	EIF1B	94	85.849	Cebus_capucinus
ENSLACG00000022678	zgc:56676	97	85.849	ENSCATG00000016704	EIF1B	94	85.849	Cercocebus_atys
ENSLACG00000022678	zgc:56676	94	87.255	ENSCLAG00000016040	EIF1B	100	87.255	Chinchilla_lanigera
ENSLACG00000022678	zgc:56676	97	85.849	ENSCSAG00000016916	EIF1B	94	85.849	Chlorocebus_sabaeus
ENSLACG00000022678	zgc:56676	94	87.255	ENSCHOG00000009555	EIF1B	100	87.255	Choloepus_hoffmanni
ENSLACG00000022678	zgc:56676	97	85.849	ENSCPBG00000000106	EIF1B	94	85.849	Chrysemys_picta_bellii
ENSLACG00000022678	zgc:56676	97	85.849	ENSCANG00000043425	EIF1B	94	85.849	Colobus_angolensis_palliatus
ENSLACG00000022678	zgc:56676	97	85.849	ENSCGRG00001004908	Eif1b	94	85.849	Cricetulus_griseus_chok1gshd
ENSLACG00000022678	zgc:56676	94	87.255	ENSCGRG00000013833	Eif1b	100	87.255	Cricetulus_griseus_crigri
ENSLACG00000022678	zgc:56676	97	84.906	ENSDARG00000029445	zgc:56676	94	84.906	Danio_rerio
ENSLACG00000022678	zgc:56676	94	87.379	ENSDORG00000025252	Eif1b	100	87.379	Dipodomys_ordii
ENSLACG00000022678	zgc:56676	97	85.849	ENSETEG00000017295	EIF1B	94	85.849	Echinops_telfairi
ENSLACG00000022678	zgc:56676	97	85.849	ENSEASG00005007609	EIF1B	94	85.849	Equus_asinus_asinus
ENSLACG00000022678	zgc:56676	97	85.849	ENSECAG00000005758	EIF1B	94	85.849	Equus_caballus
ENSLACG00000022678	zgc:56676	97	84.906	ENSELUG00000002720	zgc:56676	94	84.906	Esox_lucius
ENSLACG00000022678	zgc:56676	97	85.849	ENSFCAG00000003255	EIF1B	94	85.849	Felis_catus
ENSLACG00000022678	zgc:56676	100	83.486	ENSFALG00000012290	EIF1B	97	83.486	Ficedula_albicollis
ENSLACG00000022678	zgc:56676	97	85.849	ENSFDAG00000007219	EIF1B	94	85.849	Fukomys_damarensis
ENSLACG00000022678	zgc:56676	96	81.905	ENSGMOG00000009623	-	93	81.905	Gadus_morhua
ENSLACG00000022678	zgc:56676	97	85.849	ENSGALG00000038646	EIF1B	94	85.849	Gallus_gallus
ENSLACG00000022678	zgc:56676	97	85.849	ENSGAGG00000011376	EIF1B	94	85.849	Gopherus_agassizii
ENSLACG00000022678	zgc:56676	97	85.849	ENSGGOG00000008312	EIF1B	94	85.849	Gorilla_gorilla
ENSLACG00000022678	zgc:56676	97	85.849	ENSHGLG00100006444	EIF1B	94	85.849	Heterocephalus_glaber_male
ENSLACG00000022678	zgc:56676	96	65.714	ENSIPUG00000012511	-	92	65.714	Ictalurus_punctatus
ENSLACG00000022678	zgc:56676	97	85.849	ENSSTOG00000012168	EIF1B	94	85.849	Ictidomys_tridecemlineatus
ENSLACG00000022678	zgc:56676	94	87.255	ENSJJAG00000020423	Eif1b	100	87.255	Jaculus_jaculus
ENSLACG00000022678	zgc:56676	97	85.849	ENSLOCG00000012941	EIF1B	83	85.849	Lepisosteus_oculatus
ENSLACG00000022678	zgc:56676	97	85.849	ENSLAFG00000001140	EIF1B	94	85.849	Loxodonta_africana
ENSLACG00000022678	zgc:56676	97	85.849	ENSMFAG00000037264	EIF1B	94	85.849	Macaca_fascicularis
ENSLACG00000022678	zgc:56676	97	85.849	ENSMMUG00000040036	EIF1B	94	85.849	Macaca_mulatta
ENSLACG00000022678	zgc:56676	97	85.849	ENSMNEG00000032776	EIF1B	94	85.849	Macaca_nemestrina
ENSLACG00000022678	zgc:56676	97	85.849	ENSMLEG00000033348	EIF1B	94	85.849	Mandrillus_leucophaeus
ENSLACG00000022678	zgc:56676	97	85.849	ENSMGAG00000011733	EIF1B	94	85.849	Meleagris_gallopavo
ENSLACG00000022678	zgc:56676	97	85.849	ENSMAUG00000016815	Eif1b	94	85.849	Mesocricetus_auratus
ENSLACG00000022678	zgc:56676	97	85.849	ENSMICG00000049308	EIF1B	94	85.849	Microcebus_murinus
ENSLACG00000022678	zgc:56676	97	85.849	ENSMOCG00000000649	-	94	85.849	Microtus_ochrogaster
ENSLACG00000022678	zgc:56676	97	84.112	ENSMOCG00000017712	-	94	81.308	Microtus_ochrogaster
ENSLACG00000022678	zgc:56676	94	56.311	ENSMMOG00000020133	zgc:56676	87	47.573	Mola_mola
ENSLACG00000022678	zgc:56676	97	85.849	ENSMODG00000011056	EIF1B	94	85.849	Monodelphis_domestica
ENSLACG00000022678	zgc:56676	98	66.981	ENSMODG00000002449	-	94	66.981	Monodelphis_domestica
ENSLACG00000022678	zgc:56676	97	85.849	MGP_CAROLIEiJ_G0032817	Eif1b	94	85.849	Mus_caroli
ENSLACG00000022678	zgc:56676	97	85.849	ENSMUSG00000006941	Eif1b	94	85.849	Mus_musculus
ENSLACG00000022678	zgc:56676	97	85.849	MGP_PahariEiJ_G0015684	Eif1b	94	85.849	Mus_pahari
ENSLACG00000022678	zgc:56676	97	85.849	MGP_SPRETEiJ_G0033965	Eif1b	94	85.849	Mus_spretus
ENSLACG00000022678	zgc:56676	97	85.849	ENSMPUG00000017958	EIF1B	94	85.849	Mustela_putorius_furo
ENSLACG00000022678	zgc:56676	97	85.849	ENSMLUG00000014425	EIF1B	94	85.849	Myotis_lucifugus
ENSLACG00000022678	zgc:56676	97	85.849	ENSNGAG00000006534	Eif1b	94	85.849	Nannospalax_galili
ENSLACG00000022678	zgc:56676	97	85.849	ENSNLEG00000005660	EIF1B	94	85.849	Nomascus_leucogenys
ENSLACG00000022678	zgc:56676	97	83.019	ENSMEUG00000005336	-	94	83.019	Notamacropus_eugenii
ENSLACG00000022678	zgc:56676	52	80.357	ENSMEUG00000007908	-	74	76.596	Notamacropus_eugenii
ENSLACG00000022678	zgc:56676	97	71.963	ENSOPRG00000001569	EIF1B	94	71.963	Ochotona_princeps
ENSLACG00000022678	zgc:56676	97	85.849	ENSODEG00000010883	EIF1B	94	85.849	Octodon_degus
ENSLACG00000022678	zgc:56676	95	87.500	ENSOANG00000003583	EIF1B	91	87.500	Ornithorhynchus_anatinus
ENSLACG00000022678	zgc:56676	97	85.849	ENSOGAG00000025224	EIF1B	94	85.849	Otolemur_garnettii
ENSLACG00000022678	zgc:56676	97	85.849	ENSOARG00000002622	EIF1B	94	85.849	Ovis_aries
ENSLACG00000022678	zgc:56676	97	85.849	ENSPPAG00000028080	EIF1B	94	85.849	Pan_paniscus
ENSLACG00000022678	zgc:56676	96	86.667	ENSPPRG00000003963	EIF1B	93	86.667	Panthera_pardus
ENSLACG00000022678	zgc:56676	94	87.255	ENSPTIG00000013646	EIF1B	90	87.255	Panthera_tigris_altaica
ENSLACG00000022678	zgc:56676	97	85.849	ENSPTRG00000014776	EIF1B	94	85.849	Pan_troglodytes
ENSLACG00000022678	zgc:56676	97	85.849	ENSPANG00000033825	EIF1B	94	85.849	Papio_anubis
ENSLACG00000022678	zgc:56676	97	85.849	ENSPKIG00000004040	zgc:56676	94	85.849	Paramormyrops_kingsleyae
ENSLACG00000022678	zgc:56676	95	87.500	ENSPSIG00000002437	EIF1B	100	87.500	Pelodiscus_sinensis
ENSLACG00000022678	zgc:56676	97	75.472	ENSPMGG00000006863	zgc:56676	94	75.472	Periophthalmus_magnuspinnatus
ENSLACG00000022678	zgc:56676	96	72.381	ENSPEMG00000016270	-	89	66.667	Peromyscus_maniculatus_bairdii
ENSLACG00000022678	zgc:56676	97	85.849	ENSPCIG00000016375	EIF1B	94	85.849	Phascolarctos_cinereus
ENSLACG00000022678	zgc:56676	98	85.981	ENSPPYG00000025897	EIF1B	95	85.981	Pongo_abelii
ENSLACG00000022678	zgc:56676	94	86.408	ENSPCAG00000015629	EIF1B	99	86.408	Procavia_capensis
ENSLACG00000022678	zgc:56676	97	85.849	ENSPCOG00000020355	EIF1B	94	85.849	Propithecus_coquereli
ENSLACG00000022678	zgc:56676	97	85.849	ENSPVAG00000013911	EIF1B	94	85.849	Pteropus_vampyrus
ENSLACG00000022678	zgc:56676	97	84.906	ENSPNAG00000023915	zgc:56676	94	84.906	Pygocentrus_nattereri
ENSLACG00000022678	zgc:56676	97	85.849	ENSRNOG00000018848	Eif1b	94	85.849	Rattus_norvegicus
ENSLACG00000022678	zgc:56676	97	85.849	ENSRBIG00000006994	EIF1B	94	85.849	Rhinopithecus_bieti
ENSLACG00000022678	zgc:56676	97	85.849	ENSRROG00000040263	EIF1B	94	85.849	Rhinopithecus_roxellana
ENSLACG00000022678	zgc:56676	95	87.500	ENSSBOG00000023951	EIF1B	78	87.500	Saimiri_boliviensis_boliviensis
ENSLACG00000022678	zgc:56676	97	67.925	ENSSHAG00000012996	-	93	64.151	Sarcophilus_harrisii
ENSLACG00000022678	zgc:56676	96	86.667	ENSSHAG00000013510	-	93	86.667	Sarcophilus_harrisii
ENSLACG00000022678	zgc:56676	97	85.849	ENSSFOG00015007208	zgc:56676	94	85.849	Scleropages_formosus
ENSLACG00000022678	zgc:56676	97	84.906	ENSSPUG00000002378	EIF1B	95	86.408	Sphenodon_punctatus
ENSLACG00000022678	zgc:56676	97	85.849	ENSSSCG00000011270	EIF1B	94	85.849	Sus_scrofa
ENSLACG00000022678	zgc:56676	97	84.906	ENSTGUG00000004677	EIF1B	91	84.906	Taeniopygia_guttata
ENSLACG00000022678	zgc:56676	97	83.962	ENSTBEG00000013185	EIF1B	94	83.962	Tupaia_belangeri
ENSLACG00000022678	zgc:56676	97	85.849	ENSTTRG00000000163	EIF1B	94	85.849	Tursiops_truncatus
ENSLACG00000022678	zgc:56676	86	85.106	ENSUAMG00000022317	EIF1B	86	85.106	Ursus_americanus
ENSLACG00000022678	zgc:56676	94	87.255	ENSUMAG00000004559	EIF1B	85	87.255	Ursus_maritimus
ENSLACG00000022678	zgc:56676	97	85.849	ENSVPAG00000000967	EIF1B	94	85.849	Vicugna_pacos
ENSLACG00000022678	zgc:56676	97	85.849	ENSVVUG00000005565	EIF1B	97	85.714	Vulpes_vulpes
ENSLACG00000022678	zgc:56676	97	84.906	ENSXETG00000000359	eif1b	93	85.714	Xenopus_tropicalis