EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000000022 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 94519 bases
Position: chrscaffold_0:2844070-2938588
Accession: 100675706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000016080	RRM_1	PF00076.22	1.4e-09	1	1
ENSLAFP00000023845	RRM_1	PF00076.22	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033500	SCAF8-201	3834	-	ENSLAFP00000023845	1277 (aa)	-	G3U7N7
ENSLAFT00000000022	SCAF8-202	3816	XM_023545524	ENSLAFP00000016080	1272 (aa)	XP_023401258	G3TM16

Gene Model

Click here to download ENSLAFG00000000022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000000022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000000022	SCAF8	100	94.344	ENSG00000213079	SCAF8	100	93.794	Homo_sapiens
ENSLAFG00000000022	SCAF8	86	69.902	ENSAPOG00000015527	SCAF8	77	69.939	Acanthochromis_polyacanthus
ENSLAFG00000000022	SCAF8	100	92.504	ENSAMEG00000007583	SCAF8	97	91.963	Ailuropoda_melanoleuca
ENSLAFG00000000022	SCAF8	86	69.902	ENSAOCG00000002421	SCAF8	76	69.939	Amphiprion_ocellaris
ENSLAFG00000000022	SCAF8	84	58.824	ENSAPEG00000020115	SCAF8	75	71.978	Amphiprion_percula
ENSLAFG00000000022	SCAF8	89	69.251	ENSATEG00000006959	SCAF8	97	66.139	Anabas_testudineus
ENSLAFG00000000022	SCAF8	100	78.521	ENSAPLG00000005765	SCAF8	100	78.427	Anas_platyrhynchos
ENSLAFG00000000022	SCAF8	99	73.783	ENSACAG00000005282	SCAF8	99	73.527	Anolis_carolinensis
ENSLAFG00000000022	SCAF8	100	93.951	ENSANAG00000036184	SCAF8	100	93.401	Aotus_nancymaae
ENSLAFG00000000022	SCAF8	82	72.775	ENSACLG00000018828	SCAF8	77	72.680	Astatotilapia_calliptera
ENSLAFG00000000022	SCAF8	100	93.480	ENSBTAG00000031917	SCAF8	100	92.930	Bos_taurus
ENSLAFG00000000022	SCAF8	100	93.323	ENSCJAG00000012631	SCAF8	97	91.267	Callithrix_jacchus
ENSLAFG00000000022	SCAF8	99	93.918	ENSCAFG00000000570	SCAF8	99	93.365	Canis_familiaris
ENSLAFG00000000022	SCAF8	99	93.913	ENSCAFG00020015048	SCAF8	99	93.302	Canis_lupus_dingo
ENSLAFG00000000022	SCAF8	100	93.716	ENSCHIG00000025041	SCAF8	100	93.166	Capra_hircus
ENSLAFG00000000022	SCAF8	99	93.913	ENSTSYG00000010991	SCAF8	97	93.360	Carlito_syrichta
ENSLAFG00000000022	SCAF8	65	96.996	ENSCAPG00000003300	SCAF8	86	96.943	Cavia_aperea
ENSLAFG00000000022	SCAF8	100	80.549	ENSCPOG00000030311	-	66	79.634	Cavia_porcellus
ENSLAFG00000000022	SCAF8	99	85.174	ENSCPOG00000022216	-	99	83.912	Cavia_porcellus
ENSLAFG00000000022	SCAF8	100	93.323	ENSCCAG00000024952	SCAF8	100	92.773	Cebus_capucinus
ENSLAFG00000000022	SCAF8	100	94.423	ENSCATG00000035361	SCAF8	100	93.873	Cercocebus_atys
ENSLAFG00000000022	SCAF8	100	92.308	ENSCLAG00000004910	SCAF8	100	92.247	Chinchilla_lanigera
ENSLAFG00000000022	SCAF8	100	92.890	ENSCSAG00000013430	SCAF8	100	92.349	Chlorocebus_sabaeus
ENSLAFG00000000022	SCAF8	100	73.407	ENSCPBG00000016330	SCAF8	100	70.833	Chrysemys_picta_bellii
ENSLAFG00000000022	SCAF8	100	94.344	ENSCANG00000039499	SCAF8	99	93.745	Colobus_angolensis_palliatus
ENSLAFG00000000022	SCAF8	100	90.659	ENSCGRG00001020167	Scaf8	100	90.110	Cricetulus_griseus_chok1gshd
ENSLAFG00000000022	SCAF8	100	89.679	ENSCGRG00000004120	Scaf8	99	89.960	Cricetulus_griseus_crigri
ENSLAFG00000000022	SCAF8	86	67.941	ENSCSEG00000000043	-	78	68.927	Cynoglossus_semilaevis
ENSLAFG00000000022	SCAF8	56	54.582	ENSCSEG00000019549	scaf4a	59	54.321	Cynoglossus_semilaevis
ENSLAFG00000000022	SCAF8	82	67.320	ENSCVAG00000000925	SCAF8	68	74.359	Cyprinodon_variegatus
ENSLAFG00000000022	SCAF8	96	92.082	ENSDNOG00000025271	SCAF8	100	91.510	Dasypus_novemcinctus
ENSLAFG00000000022	SCAF8	99	90.945	ENSDORG00000006391	Scaf8	100	90.472	Dipodomys_ordii
ENSLAFG00000000022	SCAF8	100	94.505	ENSEASG00005018879	SCAF8	100	93.956	Equus_asinus_asinus
ENSLAFG00000000022	SCAF8	100	94.658	ENSECAG00000005540	SCAF8	100	94.108	Equus_caballus
ENSLAFG00000000022	SCAF8	78	71.001	ENSELUG00000002779	SCAF8	73	70.481	Esox_lucius
ENSLAFG00000000022	SCAF8	100	94.030	ENSFCAG00000023424	SCAF8	100	93.480	Felis_catus
ENSLAFG00000000022	SCAF8	100	78.149	ENSFALG00000012433	SCAF8	100	78.244	Ficedula_albicollis
ENSLAFG00000000022	SCAF8	100	92.151	ENSFDAG00000010335	SCAF8	99	91.949	Fukomys_damarensis
ENSLAFG00000000022	SCAF8	89	71.335	ENSFHEG00000008284	SCAF8	77	71.373	Fundulus_heteroclitus
ENSLAFG00000000022	SCAF8	80	57.726	ENSGMOG00000018812	SCAF8	60	76.006	Gadus_morhua
ENSLAFG00000000022	SCAF8	99	79.393	ENSGALG00000013635	SCAF8	99	78.833	Gallus_gallus
ENSLAFG00000000022	SCAF8	86	68.635	ENSGAFG00000018033	SCAF8	69	73.065	Gambusia_affinis
ENSLAFG00000000022	SCAF8	93	54.207	ENSGACG00000006909	SCAF8	99	53.061	Gasterosteus_aculeatus
ENSLAFG00000000022	SCAF8	63	71.744	ENSGAGG00000017820	-	88	70.849	Gopherus_agassizii
ENSLAFG00000000022	SCAF8	100	94.344	ENSGGOG00000008645	SCAF8	100	93.794	Gorilla_gorilla
ENSLAFG00000000022	SCAF8	82	72.644	ENSHBUG00000019537	SCAF8	77	72.549	Haplochromis_burtoni
ENSLAFG00000000022	SCAF8	100	92.543	ENSHGLG00000003619	SCAF8	100	91.994	Heterocephalus_glaber_female
ENSLAFG00000000022	SCAF8	100	91.915	ENSHGLG00100004708	SCAF8	100	91.930	Heterocephalus_glaber_male
ENSLAFG00000000022	SCAF8	99	93.523	ENSSTOG00000026043	SCAF8	99	92.970	Ictidomys_tridecemlineatus
ENSLAFG00000000022	SCAF8	100	90.738	ENSJJAG00000020480	Scaf8	100	90.188	Jaculus_jaculus
ENSLAFG00000000022	SCAF8	86	69.174	ENSKMAG00000012767	SCAF8	78	69.212	Kryptolebias_marmoratus
ENSLAFG00000000022	SCAF8	68	78.148	ENSLBEG00000012484	-	62	78.214	Labrus_bergylta
ENSLAFG00000000022	SCAF8	100	61.760	ENSLOCG00000016856	SCAF8	100	60.981	Lepisosteus_oculatus
ENSLAFG00000000022	SCAF8	100	94.423	ENSMFAG00000032738	SCAF8	100	93.873	Macaca_fascicularis
ENSLAFG00000000022	SCAF8	100	94.423	ENSMMUG00000015163	SCAF8	100	93.873	Macaca_mulatta
ENSLAFG00000000022	SCAF8	100	94.423	ENSMNEG00000043466	SCAF8	100	93.873	Macaca_nemestrina
ENSLAFG00000000022	SCAF8	99	94.220	ENSMLEG00000034845	SCAF8	99	93.666	Mandrillus_leucophaeus
ENSLAFG00000000022	SCAF8	83	65.982	ENSMAMG00000009457	SCAF8	76	65.128	Mastacembelus_armatus
ENSLAFG00000000022	SCAF8	82	72.644	ENSMZEG00005005698	SCAF8	77	72.549	Maylandia_zebra
ENSLAFG00000000022	SCAF8	99	79.193	ENSMGAG00000012762	SCAF8	100	78.943	Meleagris_gallopavo
ENSLAFG00000000022	SCAF8	99	90.190	ENSMAUG00000009513	Scaf8	100	89.636	Mesocricetus_auratus
ENSLAFG00000000022	SCAF8	100	93.721	ENSMICG00000028965	SCAF8	100	93.014	Microcebus_murinus
ENSLAFG00000000022	SCAF8	100	91.287	ENSMOCG00000014950	Scaf8	100	90.738	Microtus_ochrogaster
ENSLAFG00000000022	SCAF8	85	63.920	ENSMMOG00000002216	SCAF8	78	63.079	Mola_mola
ENSLAFG00000000022	SCAF8	99	85.556	ENSMODG00000008301	SCAF8	99	85.320	Monodelphis_domestica
ENSLAFG00000000022	SCAF8	86	68.803	ENSMALG00000011584	SCAF8	78	68.682	Monopterus_albus
ENSLAFG00000000022	SCAF8	100	89.945	MGP_CAROLIEiJ_G0021016	Scaf8	100	89.395	Mus_caroli
ENSLAFG00000000022	SCAF8	100	90.181	ENSMUSG00000046201	Scaf8	100	89.631	Mus_musculus
ENSLAFG00000000022	SCAF8	100	90.731	MGP_PahariEiJ_G0023334	Scaf8	100	90.181	Mus_pahari
ENSLAFG00000000022	SCAF8	100	91.731	ENSMPUG00000001974	SCAF8	100	91.190	Mustela_putorius_furo
ENSLAFG00000000022	SCAF8	100	91.909	ENSMLUG00000029190	SCAF8	100	91.438	Myotis_lucifugus
ENSLAFG00000000022	SCAF8	100	91.209	ENSNGAG00000012332	Scaf8	100	90.659	Nannospalax_galili
ENSLAFG00000000022	SCAF8	95	64.431	ENSNBRG00000009067	SCAF8	96	68.258	Neolamprologus_brichardi
ENSLAFG00000000022	SCAF8	100	93.025	ENSNLEG00000015509	SCAF8	99	92.151	Nomascus_leucogenys
ENSLAFG00000000022	SCAF8	70	89.396	ENSOPRG00000018413	-	76	89.474	Ochotona_princeps
ENSLAFG00000000022	SCAF8	100	92.471	ENSODEG00000007296	SCAF8	100	91.922	Octodon_degus
ENSLAFG00000000022	SCAF8	100	55.556	ENSONIG00000008119	SCAF8	99	55.410	Oreochromis_niloticus
ENSLAFG00000000022	SCAF8	99	94.234	ENSOCUG00000026063	SCAF8	99	93.681	Oryctolagus_cuniculus
ENSLAFG00000000022	SCAF8	93	56.245	ENSORLG00000017358	SCAF8	75	71.838	Oryzias_latipes
ENSLAFG00000000022	SCAF8	93	56.490	ENSORLG00020002214	SCAF8	75	72.099	Oryzias_latipes_hni
ENSLAFG00000000022	SCAF8	93	56.429	ENSORLG00015015779	SCAF8	76	71.228	Oryzias_latipes_hsok
ENSLAFG00000000022	SCAF8	93	56.990	ENSOMEG00000015471	SCAF8	75	71.969	Oryzias_melastigma
ENSLAFG00000000022	SCAF8	100	92.040	ENSOGAG00000034223	SCAF8	97	91.499	Otolemur_garnettii
ENSLAFG00000000022	SCAF8	99	93.354	ENSOARG00000004159	SCAF8	100	92.801	Ovis_aries
ENSLAFG00000000022	SCAF8	100	94.187	ENSPPAG00000039826	SCAF8	100	93.637	Pan_paniscus
ENSLAFG00000000022	SCAF8	100	94.030	ENSPPRG00000023175	SCAF8	100	93.480	Panthera_pardus
ENSLAFG00000000022	SCAF8	99	93.913	ENSPTIG00000014836	SCAF8	100	93.360	Panthera_tigris_altaica
ENSLAFG00000000022	SCAF8	100	94.344	ENSPTRG00000018727	SCAF8	100	93.794	Pan_troglodytes
ENSLAFG00000000022	SCAF8	100	94.266	ENSPANG00000017489	SCAF8	100	91.752	Papio_anubis
ENSLAFG00000000022	SCAF8	100	57.776	ENSPKIG00000021212	SCAF8	100	56.642	Paramormyrops_kingsleyae
ENSLAFG00000000022	SCAF8	89	70.857	ENSPSIG00000008614	SCAF8	99	72.674	Pelodiscus_sinensis
ENSLAFG00000000022	SCAF8	99	90.981	ENSPEMG00000010531	Scaf8	100	90.427	Peromyscus_maniculatus_bairdii
ENSLAFG00000000022	SCAF8	100	86.510	ENSPCIG00000001141	SCAF8	100	86.353	Phascolarctos_cinereus
ENSLAFG00000000022	SCAF8	86	68.966	ENSPFOG00000004176	SCAF8	100	54.491	Poecilia_formosa
ENSLAFG00000000022	SCAF8	86	68.842	ENSPLAG00000021432	SCAF8	75	71.503	Poecilia_latipinna
ENSLAFG00000000022	SCAF8	86	68.966	ENSPMEG00000007591	SCAF8	84	68.211	Poecilia_mexicana
ENSLAFG00000000022	SCAF8	86	68.719	ENSPREG00000000652	SCAF8	69	76.981	Poecilia_reticulata
ENSLAFG00000000022	SCAF8	100	92.863	ENSPPYG00000017121	SCAF8	100	91.765	Pongo_abelii
ENSLAFG00000000022	SCAF8	85	97.822	ENSPCAG00000013044	SCAF8	90	97.822	Procavia_capensis
ENSLAFG00000000022	SCAF8	100	94.035	ENSPCOG00000002067	SCAF8	99	93.275	Propithecus_coquereli
ENSLAFG00000000022	SCAF8	99	90.191	ENSPVAG00000005582	SCAF8	100	90.750	Pteropus_vampyrus
ENSLAFG00000000022	SCAF8	82	72.775	ENSPNYG00000007277	SCAF8	77	72.680	Pundamilia_nyererei
ENSLAFG00000000022	SCAF8	82	71.651	ENSPNAG00000024740	SCAF8	79	71.912	Pygocentrus_nattereri
ENSLAFG00000000022	SCAF8	100	90.652	ENSRNOG00000016919	Scaf8	100	90.102	Rattus_norvegicus
ENSLAFG00000000022	SCAF8	100	94.344	ENSRBIG00000035769	SCAF8	100	93.794	Rhinopithecus_bieti
ENSLAFG00000000022	SCAF8	100	94.423	ENSRROG00000013580	SCAF8	100	93.873	Rhinopithecus_roxellana
ENSLAFG00000000022	SCAF8	100	93.401	ENSSBOG00000027023	SCAF8	100	92.852	Saimiri_boliviensis_boliviensis
ENSLAFG00000000022	SCAF8	100	85.961	ENSSHAG00000009915	SCAF8	100	85.412	Sarcophilus_harrisii
ENSLAFG00000000022	SCAF8	99	58.481	ENSSFOG00015009481	SCAF8	99	58.481	Scleropages_formosus
ENSLAFG00000000022	SCAF8	82	72.418	ENSSMAG00000008275	SCAF8	77	72.063	Scophthalmus_maximus
ENSLAFG00000000022	SCAF8	100	76.714	ENSSPUG00000015219	SCAF8	100	76.604	Sphenodon_punctatus
ENSLAFG00000000022	SCAF8	100	93.873	ENSSSCG00000004070	SCAF8	100	93.323	Sus_scrofa
ENSLAFG00000000022	SCAF8	99	79.356	ENSTGUG00000011151	SCAF8	100	79.356	Taeniopygia_guttata
ENSLAFG00000000022	SCAF8	87	67.636	ENSTRUG00000009243	SCAF8	78	67.518	Takifugu_rubripes
ENSLAFG00000000022	SCAF8	87	69.231	ENSTNIG00000016885	SCAF8	99	69.661	Tetraodon_nigroviridis
ENSLAFG00000000022	SCAF8	99	93.666	ENSTTRG00000014538	SCAF8	100	93.112	Tursiops_truncatus
ENSLAFG00000000022	SCAF8	100	93.951	ENSUAMG00000024736	SCAF8	99	93.349	Ursus_americanus
ENSLAFG00000000022	SCAF8	98	93.910	ENSUMAG00000013404	SCAF8	100	93.349	Ursus_maritimus
ENSLAFG00000000022	SCAF8	67	83.856	ENSVPAG00000012465	SCAF8	99	83.391	Vicugna_pacos
ENSLAFG00000000022	SCAF8	99	93.992	ENSVVUG00000007532	SCAF8	100	93.429	Vulpes_vulpes
ENSLAFG00000000022	SCAF8	100	61.038	ENSXETG00000013132	scaf8	100	60.739	Xenopus_tropicalis
ENSLAFG00000000022	SCAF8	86	68.719	ENSXMAG00000019192	SCAF8	75	71.503	Xiphophorus_maculatus