EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000000040 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 89733 bases
Position: chrscaffold_30:480973-570705
Accession: 18398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000000034	ResIII	PF04851.15	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000000041	SMARCAD1-201	3075	-	ENSLAFP00000000034	1024 (aa)	-	G3SL00

Gene Model

Click here to download ENSLAFG00000000040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000000040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000000040	SMARCAD1	100	94.542	ENSG00000163104	SMARCAD1	100	95.638	Homo_sapiens
ENSLAFG00000000040	SMARCAD1	68	62.123	ENSAPOG00000011446	smarcad1a	68	60.274	Acanthochromis_polyacanthus
ENSLAFG00000000040	SMARCAD1	100	95.136	ENSAMEG00000005844	SMARCAD1	100	95.136	Ailuropoda_melanoleuca
ENSLAFG00000000040	SMARCAD1	67	66.667	ENSACIG00000018326	smarcad1a	100	66.667	Amphilophus_citrinellus
ENSLAFG00000000040	SMARCAD1	100	62.123	ENSAOCG00000019762	smarcad1a	100	60.411	Amphiprion_ocellaris
ENSLAFG00000000040	SMARCAD1	100	62.267	ENSAPEG00000003889	smarcad1a	98	60.411	Amphiprion_percula
ENSLAFG00000000040	SMARCAD1	90	61.376	ENSATEG00000015608	smarcad1a	90	61.376	Anabas_testudineus
ENSLAFG00000000040	SMARCAD1	94	70.619	ENSAPLG00000004630	SMARCAD1	100	71.340	Anas_platyrhynchos
ENSLAFG00000000040	SMARCAD1	100	68.732	ENSACAG00000013554	SMARCAD1	100	69.253	Anolis_carolinensis
ENSLAFG00000000040	SMARCAD1	100	94.066	ENSANAG00000020488	SMARCAD1	100	94.066	Aotus_nancymaae
ENSLAFG00000000040	SMARCAD1	92	65.055	ENSACLG00000017063	smarcad1a	90	65.055	Astatotilapia_calliptera
ENSLAFG00000000040	SMARCAD1	70	59.414	ENSAMXG00000015470	smarcad1a	99	59.414	Astyanax_mexicanus
ENSLAFG00000000040	SMARCAD1	78	57.579	ENSAMXG00000019130	smarcad1b	85	58.479	Astyanax_mexicanus
ENSLAFG00000000040	SMARCAD1	100	94.266	ENSBTAG00000017061	SMARCAD1	100	94.266	Bos_taurus
ENSLAFG00000000040	SMARCAD1	61	41.824	WBGene00010845	M03C11.8	63	41.770	Caenorhabditis_elegans
ENSLAFG00000000040	SMARCAD1	100	94.542	ENSCJAG00000006778	SMARCAD1	100	94.542	Callithrix_jacchus
ENSLAFG00000000040	SMARCAD1	100	94.747	ENSCAFG00000010026	SMARCAD1	100	94.747	Canis_familiaris
ENSLAFG00000000040	SMARCAD1	87	95.393	ENSCAFG00020003994	SMARCAD1	100	95.393	Canis_lupus_dingo
ENSLAFG00000000040	SMARCAD1	100	94.553	ENSCHIG00000012905	SMARCAD1	100	94.553	Capra_hircus
ENSLAFG00000000040	SMARCAD1	100	94.158	ENSTSYG00000002706	SMARCAD1	100	94.158	Carlito_syrichta
ENSLAFG00000000040	SMARCAD1	90	75.107	ENSCAPG00000016744	SMARCAD1	96	75.862	Cavia_aperea
ENSLAFG00000000040	SMARCAD1	100	91.085	ENSCPOG00000011398	SMARCAD1	100	91.085	Cavia_porcellus
ENSLAFG00000000040	SMARCAD1	100	94.347	ENSCCAG00000022264	SMARCAD1	100	95.638	Cebus_capucinus
ENSLAFG00000000040	SMARCAD1	100	94.639	ENSCATG00000035663	SMARCAD1	100	95.679	Cercocebus_atys
ENSLAFG00000000040	SMARCAD1	82	95.238	ENSCSAG00000004186	SMARCAD1	100	95.238	Chlorocebus_sabaeus
ENSLAFG00000000040	SMARCAD1	100	71.950	ENSCPBG00000013203	SMARCAD1	100	72.430	Chrysemys_picta_bellii
ENSLAFG00000000040	SMARCAD1	64	48.348	ENSCING00000001688	-	99	48.348	Ciona_intestinalis
ENSLAFG00000000040	SMARCAD1	100	94.444	ENSCANG00000003556	SMARCAD1	100	95.638	Colobus_angolensis_palliatus
ENSLAFG00000000040	SMARCAD1	100	90.741	ENSCGRG00001015056	Smarcad1	100	90.741	Cricetulus_griseus_chok1gshd
ENSLAFG00000000040	SMARCAD1	100	90.741	ENSCGRG00000014087	Smarcad1	100	90.741	Cricetulus_griseus_crigri
ENSLAFG00000000040	SMARCAD1	84	59.626	ENSCSEG00000014419	-	90	58.207	Cynoglossus_semilaevis
ENSLAFG00000000040	SMARCAD1	100	61.224	ENSCSEG00000017903	smarcad1a	98	58.848	Cynoglossus_semilaevis
ENSLAFG00000000040	SMARCAD1	85	53.384	ENSDARG00000014041	smarcad1a	92	54.465	Danio_rerio
ENSLAFG00000000040	SMARCAD1	78	56.950	ENSDARG00000073721	smarcad1b	82	58.122	Danio_rerio
ENSLAFG00000000040	SMARCAD1	100	94.152	ENSDNOG00000000806	-	100	94.152	Dasypus_novemcinctus
ENSLAFG00000000040	SMARCAD1	100	90.185	ENSDORG00000012331	Smarcad1	100	90.185	Dipodomys_ordii
ENSLAFG00000000040	SMARCAD1	63	45.077	FBgn0032157	Etl1	91	40.000	Drosophila_melanogaster
ENSLAFG00000000040	SMARCAD1	62	44.923	ENSEBUG00000003969	smarcad1a	95	46.104	Eptatretus_burgeri
ENSLAFG00000000040	SMARCAD1	100	94.844	ENSEASG00005012382	SMARCAD1	100	94.844	Equus_asinus_asinus
ENSLAFG00000000040	SMARCAD1	100	94.844	ENSECAG00000011562	SMARCAD1	100	94.844	Equus_caballus
ENSLAFG00000000040	SMARCAD1	100	50.368	ENSELUG00000018535	smarcad1a	100	50.139	Esox_lucius
ENSLAFG00000000040	SMARCAD1	75	56.654	ENSELUG00000019154	smarcad1b	79	57.417	Esox_lucius
ENSLAFG00000000040	SMARCAD1	100	94.547	ENSFCAG00000003958	SMARCAD1	100	95.805	Felis_catus
ENSLAFG00000000040	SMARCAD1	100	66.570	ENSFALG00000006089	SMARCAD1	100	66.281	Ficedula_albicollis
ENSLAFG00000000040	SMARCAD1	100	92.690	ENSFDAG00000017027	SMARCAD1	100	92.690	Fukomys_damarensis
ENSLAFG00000000040	SMARCAD1	94	63.976	ENSFHEG00000012778	smarcad1a	87	61.367	Fundulus_heteroclitus
ENSLAFG00000000040	SMARCAD1	84	57.258	ENSGMOG00000018995	smarcad1a	97	56.682	Gadus_morhua
ENSLAFG00000000040	SMARCAD1	77	71.302	ENSGALG00000037339	SMARCAD1	94	71.903	Gallus_gallus
ENSLAFG00000000040	SMARCAD1	90	65.245	ENSGAFG00000013498	smarcad1a	60	65.245	Gambusia_affinis
ENSLAFG00000000040	SMARCAD1	85	56.738	ENSGACG00000007327	smarcad1a	99	57.191	Gasterosteus_aculeatus
ENSLAFG00000000040	SMARCAD1	100	72.019	ENSGAGG00000008582	SMARCAD1	100	72.297	Gopherus_agassizii
ENSLAFG00000000040	SMARCAD1	100	94.639	ENSGGOG00000023001	SMARCAD1	100	94.639	Gorilla_gorilla
ENSLAFG00000000040	SMARCAD1	97	61.583	ENSHBUG00000011042	smarcad1a	90	64.899	Haplochromis_burtoni
ENSLAFG00000000040	SMARCAD1	100	92.906	ENSHGLG00000005070	SMARCAD1	100	92.906	Heterocephalus_glaber_female
ENSLAFG00000000040	SMARCAD1	100	92.906	ENSHGLG00100006812	SMARCAD1	100	92.906	Heterocephalus_glaber_male
ENSLAFG00000000040	SMARCAD1	99	62.208	ENSHCOG00000007848	smarcad1a	94	60.961	Hippocampus_comes
ENSLAFG00000000040	SMARCAD1	81	56.615	ENSIPUG00000022817	smarcad1b	89	56.683	Ictalurus_punctatus
ENSLAFG00000000040	SMARCAD1	62	63.693	ENSIPUG00000000242	smarcad1a	73	59.388	Ictalurus_punctatus
ENSLAFG00000000040	SMARCAD1	100	94.255	ENSSTOG00000001227	SMARCAD1	100	94.255	Ictidomys_tridecemlineatus
ENSLAFG00000000040	SMARCAD1	100	92.398	ENSJJAG00000022342	Smarcad1	100	92.398	Jaculus_jaculus
ENSLAFG00000000040	SMARCAD1	93	62.991	ENSKMAG00000021351	smarcad1a	90	60.198	Kryptolebias_marmoratus
ENSLAFG00000000040	SMARCAD1	79	64.328	ENSLBEG00000008088	smarcad1a	90	64.328	Labrus_bergylta
ENSLAFG00000000040	SMARCAD1	100	53.854	ENSLOCG00000012909	smarcad1a	100	54.231	Lepisosteus_oculatus
ENSLAFG00000000040	SMARCAD1	100	94.639	ENSMFAG00000042606	SMARCAD1	100	94.826	Macaca_fascicularis
ENSLAFG00000000040	SMARCAD1	87	94.826	ENSMMUG00000022242	SMARCAD1	100	94.826	Macaca_mulatta
ENSLAFG00000000040	SMARCAD1	100	94.542	ENSMNEG00000038117	SMARCAD1	100	95.470	Macaca_nemestrina
ENSLAFG00000000040	SMARCAD1	100	94.542	ENSMLEG00000038333	SMARCAD1	100	95.638	Mandrillus_leucophaeus
ENSLAFG00000000040	SMARCAD1	69	61.752	ENSMAMG00000000933	smarcad1a	68	61.581	Mastacembelus_armatus
ENSLAFG00000000040	SMARCAD1	92	65.055	ENSMZEG00005005203	smarcad1a	100	49.132	Maylandia_zebra
ENSLAFG00000000040	SMARCAD1	94	63.543	ENSMGAG00000005577	SMARCAD1	100	63.543	Meleagris_gallopavo
ENSLAFG00000000040	SMARCAD1	100	90.448	ENSMAUG00000008417	Smarcad1	100	90.448	Mesocricetus_auratus
ENSLAFG00000000040	SMARCAD1	100	93.294	ENSMICG00000009746	SMARCAD1	100	93.294	Microcebus_murinus
ENSLAFG00000000040	SMARCAD1	100	89.864	ENSMOCG00000017142	Smarcad1	100	89.864	Microtus_ochrogaster
ENSLAFG00000000040	SMARCAD1	77	57.481	ENSMMOG00000000275	smarcad1a	92	63.284	Mola_mola
ENSLAFG00000000040	SMARCAD1	100	79.247	ENSMODG00000019268	SMARCAD1	100	79.247	Monodelphis_domestica
ENSLAFG00000000040	SMARCAD1	95	90.791	MGP_CAROLIEiJ_G0028458	-	77	90.791	Mus_caroli
ENSLAFG00000000040	SMARCAD1	100	89.484	ENSMUSG00000029920	Smarcad1	100	89.484	Mus_musculus
ENSLAFG00000000040	SMARCAD1	100	90.068	MGP_PahariEiJ_G0022198	Smarcad1	100	90.068	Mus_pahari
ENSLAFG00000000040	SMARCAD1	100	89.581	MGP_SPRETEiJ_G0029462	Smarcad1	100	89.581	Mus_spretus
ENSLAFG00000000040	SMARCAD1	100	94.942	ENSMPUG00000002111	SMARCAD1	100	94.942	Mustela_putorius_furo
ENSLAFG00000000040	SMARCAD1	100	91.051	ENSMLUG00000000425	SMARCAD1	100	91.051	Myotis_lucifugus
ENSLAFG00000000040	SMARCAD1	100	91.715	ENSNGAG00000000810	Smarcad1	100	91.715	Nannospalax_galili
ENSLAFG00000000040	SMARCAD1	66	61.799	ENSNBRG00000012749	smarcad1a	85	59.607	Neolamprologus_brichardi
ENSLAFG00000000040	SMARCAD1	100	94.639	ENSNLEG00000014225	SMARCAD1	100	95.638	Nomascus_leucogenys
ENSLAFG00000000040	SMARCAD1	100	91.545	ENSODEG00000004334	SMARCAD1	100	91.545	Octodon_degus
ENSLAFG00000000040	SMARCAD1	63	64.506	ENSONIG00000015059	smarcad1a	100	51.544	Oreochromis_niloticus
ENSLAFG00000000040	SMARCAD1	80	82.367	ENSOANG00000013764	SMARCAD1	100	82.488	Ornithorhynchus_anatinus
ENSLAFG00000000040	SMARCAD1	100	93.957	ENSOCUG00000017283	SMARCAD1	100	93.957	Oryctolagus_cuniculus
ENSLAFG00000000040	SMARCAD1	65	63.253	ENSORLG00000004869	smarcad1a	68	60.028	Oryzias_latipes
ENSLAFG00000000040	SMARCAD1	65	63.253	ENSORLG00020020569	smarcad1a	68	59.504	Oryzias_latipes_hni
ENSLAFG00000000040	SMARCAD1	65	63.102	ENSORLG00015009045	smarcad1a	68	60.028	Oryzias_latipes_hsok
ENSLAFG00000000040	SMARCAD1	65	63.008	ENSOMEG00000023032	smarcad1a	68	59.285	Oryzias_melastigma
ENSLAFG00000000040	SMARCAD1	100	92.809	ENSOGAG00000011444	SMARCAD1	100	92.809	Otolemur_garnettii
ENSLAFG00000000040	SMARCAD1	100	94.455	ENSOARG00000017851	SMARCAD1	100	94.455	Ovis_aries
ENSLAFG00000000040	SMARCAD1	100	94.737	ENSPPAG00000035715	SMARCAD1	100	94.737	Pan_paniscus
ENSLAFG00000000040	SMARCAD1	100	94.645	ENSPPRG00000024756	SMARCAD1	100	95.805	Panthera_pardus
ENSLAFG00000000040	SMARCAD1	100	94.461	ENSPTIG00000017868	SMARCAD1	100	94.461	Panthera_tigris_altaica
ENSLAFG00000000040	SMARCAD1	100	94.639	ENSPTRG00000023126	SMARCAD1	100	95.638	Pan_troglodytes
ENSLAFG00000000040	SMARCAD1	100	93.495	ENSPANG00000019757	SMARCAD1	99	95.516	Papio_anubis
ENSLAFG00000000040	SMARCAD1	100	71.360	ENSPSIG00000010255	SMARCAD1	100	71.360	Pelodiscus_sinensis
ENSLAFG00000000040	SMARCAD1	62	63.608	ENSPMGG00000010735	smarcad1a	95	62.130	Periophthalmus_magnuspinnatus
ENSLAFG00000000040	SMARCAD1	100	76.316	ENSPEMG00000001854	Smarcad1	100	76.608	Peromyscus_maniculatus_bairdii
ENSLAFG00000000040	SMARCAD1	84	50.394	ENSPMAG00000003516	smarcad1a	99	46.869	Petromyzon_marinus
ENSLAFG00000000040	SMARCAD1	77	84.829	ENSPCIG00000008137	SMARCAD1	98	85.989	Phascolarctos_cinereus
ENSLAFG00000000040	SMARCAD1	62	65.211	ENSPFOG00000019116	smarcad1a	64	61.173	Poecilia_formosa
ENSLAFG00000000040	SMARCAD1	62	65.055	ENSPLAG00000000108	smarcad1a	64	61.034	Poecilia_latipinna
ENSLAFG00000000040	SMARCAD1	62	65.211	ENSPMEG00000009155	smarcad1a	64	61.173	Poecilia_mexicana
ENSLAFG00000000040	SMARCAD1	100	62.571	ENSPREG00000018185	smarcad1a	94	61.752	Poecilia_reticulata
ENSLAFG00000000040	SMARCAD1	100	94.066	ENSPPYG00000014935	SMARCAD1	100	94.066	Pongo_abelii
ENSLAFG00000000040	SMARCAD1	86	85.931	ENSPCOG00000020478	SMARCAD1	100	85.931	Propithecus_coquereli
ENSLAFG00000000040	SMARCAD1	100	92.906	ENSPVAG00000001760	SMARCAD1	100	92.906	Pteropus_vampyrus
ENSLAFG00000000040	SMARCAD1	66	61.357	ENSPNYG00000010087	smarcad1a	81	61.357	Pundamilia_nyererei
ENSLAFG00000000040	SMARCAD1	78	57.073	ENSPNAG00000010099	smarcad1b	99	51.360	Pygocentrus_nattereri
ENSLAFG00000000040	SMARCAD1	84	54.343	ENSPNAG00000001663	smarcad1a	90	54.292	Pygocentrus_nattereri
ENSLAFG00000000040	SMARCAD1	100	90.750	ENSRNOG00000006391	Smarcad1	100	90.750	Rattus_norvegicus
ENSLAFG00000000040	SMARCAD1	100	94.639	ENSRBIG00000041989	SMARCAD1	100	94.639	Rhinopithecus_bieti
ENSLAFG00000000040	SMARCAD1	100	94.639	ENSRROG00000035309	SMARCAD1	100	94.639	Rhinopithecus_roxellana
ENSLAFG00000000040	SMARCAD1	100	94.347	ENSSBOG00000032114	SMARCAD1	100	95.638	Saimiri_boliviensis_boliviensis
ENSLAFG00000000040	SMARCAD1	100	80.116	ENSSHAG00000001279	SMARCAD1	100	80.212	Sarcophilus_harrisii
ENSLAFG00000000040	SMARCAD1	100	49.766	ENSSFOG00015016814	smarcad1b	100	49.442	Scleropages_formosus
ENSLAFG00000000040	SMARCAD1	74	55.959	ENSSFOG00015020909	smarcad1a	100	55.959	Scleropages_formosus
ENSLAFG00000000040	SMARCAD1	97	63.037	ENSSMAG00000001326	smarcad1a	96	62.132	Scophthalmus_maximus
ENSLAFG00000000040	SMARCAD1	68	61.693	ENSSDUG00000022338	smarcad1a	84	60.644	Seriola_dumerili
ENSLAFG00000000040	SMARCAD1	92	64.743	ENSSLDG00000024986	smarcad1a	97	60.111	Seriola_lalandi_dorsalis
ENSLAFG00000000040	SMARCAD1	58	82.412	ENSSPUG00000004633	SMARCAD1	100	82.412	Sphenodon_punctatus
ENSLAFG00000000040	SMARCAD1	97	62.213	ENSSPAG00000001970	smarcad1a	95	62.213	Stegastes_partitus
ENSLAFG00000000040	SMARCAD1	100	94.650	ENSSSCG00000009193	SMARCAD1	100	95.482	Sus_scrofa
ENSLAFG00000000040	SMARCAD1	76	76.403	ENSTGUG00000003127	SMARCAD1	100	76.658	Taeniopygia_guttata
ENSLAFG00000000040	SMARCAD1	84	56.150	ENSTNIG00000017585	smarcad1a	99	56.150	Tetraodon_nigroviridis
ENSLAFG00000000040	SMARCAD1	91	94.048	ENSTBEG00000002789	SMARCAD1	91	94.048	Tupaia_belangeri
ENSLAFG00000000040	SMARCAD1	98	93.644	ENSTTRG00000000226	SMARCAD1	100	93.644	Tursiops_truncatus
ENSLAFG00000000040	SMARCAD1	100	95.039	ENSUAMG00000022262	SMARCAD1	100	95.039	Ursus_americanus
ENSLAFG00000000040	SMARCAD1	100	95.131	ENSUMAG00000004549	SMARCAD1	100	95.131	Ursus_maritimus
ENSLAFG00000000040	SMARCAD1	100	94.553	ENSVVUG00000007271	SMARCAD1	100	95.244	Vulpes_vulpes
ENSLAFG00000000040	SMARCAD1	84	64.164	ENSXETG00000019214	smarcad1	100	64.050	Xenopus_tropicalis
ENSLAFG00000000040	SMARCAD1	76	58.376	ENSXCOG00000005232	smarcad1a	88	56.572	Xiphophorus_couchianus
ENSLAFG00000000040	SMARCAD1	62	65.211	ENSXMAG00000015350	smarcad1a	64	60.979	Xiphophorus_maculatus