EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000000098 (Gene tree)
Gene ID: -
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 93132 bases
Position: chrscaffold_48:294134-387265
Accession: 100656328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000029240	Not1	PF04054.15	8.5e-153	1	1
ENSLAFP00000000085	Not1	PF04054.15	3e-150	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000032922	CNOT1-202	7125	-	ENSLAFP00000029240	2374 (aa)	-	G3UN31
ENSLAFT00000000102	CNOT1-201	7137	XM_003417028	ENSLAFP00000000085	2378 (aa)	XP_003417076	G3SL38

Gene Model

Click here to download ENSLAFG00000000098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000000098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000000098	CNOT1	100	99.537	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSLAFG00000000098	CNOT1	97	96.774	ENSAPOG00000005042	cnot1	100	96.774	Acanthochromis_polyacanthus
ENSLAFG00000000098	CNOT1	100	99.453	ENSAMEG00000017298	CNOT1	100	99.453	Ailuropoda_melanoleuca
ENSLAFG00000000098	CNOT1	90	89.804	ENSACIG00000016003	cnot1	100	90.084	Amphilophus_citrinellus
ENSLAFG00000000098	CNOT1	100	90.436	ENSAPEG00000022342	cnot1	100	90.352	Amphiprion_percula
ENSLAFG00000000098	CNOT1	97	96.914	ENSATEG00000012892	cnot1	100	96.914	Anabas_testudineus
ENSLAFG00000000098	CNOT1	100	97.523	ENSAPLG00000007162	CNOT1	100	97.523	Anas_platyrhynchos
ENSLAFG00000000098	CNOT1	91	96.200	ENSACAG00000001602	CNOT1	98	96.200	Anolis_carolinensis
ENSLAFG00000000098	CNOT1	100	96.774	ENSANAG00000038198	CNOT1	100	96.774	Aotus_nancymaae
ENSLAFG00000000098	CNOT1	97	96.914	ENSACLG00000014234	cnot1	100	96.914	Astatotilapia_calliptera
ENSLAFG00000000098	CNOT1	100	90.794	ENSAMXG00000013170	cnot1	100	91.008	Astyanax_mexicanus
ENSLAFG00000000098	CNOT1	100	99.622	ENSBTAG00000020782	CNOT1	100	99.622	Bos_taurus
ENSLAFG00000000098	CNOT1	81	40.394	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSLAFG00000000098	CNOT1	100	99.495	ENSCJAG00000011318	CNOT1	100	99.495	Callithrix_jacchus
ENSLAFG00000000098	CNOT1	100	99.287	ENSCAFG00000008426	CNOT1	100	99.287	Canis_familiaris
ENSLAFG00000000098	CNOT1	100	98.534	ENSCAFG00020010156	CNOT1	100	99.316	Canis_lupus_dingo
ENSLAFG00000000098	CNOT1	100	99.622	ENSCHIG00000010452	CNOT1	100	99.622	Capra_hircus
ENSLAFG00000000098	CNOT1	100	99.664	ENSTSYG00000006888	CNOT1	100	99.664	Carlito_syrichta
ENSLAFG00000000098	CNOT1	100	94.870	ENSCPOG00000013026	CNOT1	100	94.870	Cavia_porcellus
ENSLAFG00000000098	CNOT1	100	97.939	ENSCCAG00000026333	CNOT1	100	97.939	Cebus_capucinus
ENSLAFG00000000098	CNOT1	100	99.579	ENSCATG00000032625	CNOT1	100	99.579	Cercocebus_atys
ENSLAFG00000000098	CNOT1	100	99.537	ENSCLAG00000006289	CNOT1	100	99.537	Chinchilla_lanigera
ENSLAFG00000000098	CNOT1	100	99.579	ENSCSAG00000004731	CNOT1	100	99.579	Chlorocebus_sabaeus
ENSLAFG00000000098	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSLAFG00000000098	CNOT1	95	98.472	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSLAFG00000000098	CNOT1	100	58.929	ENSCING00000009149	-	100	58.609	Ciona_intestinalis
ENSLAFG00000000098	CNOT1	89	62.915	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSLAFG00000000098	CNOT1	100	97.453	ENSCANG00000040534	CNOT1	100	97.453	Colobus_angolensis_palliatus
ENSLAFG00000000098	CNOT1	100	99.201	ENSCGRG00001016365	Cnot1	100	99.201	Cricetulus_griseus_chok1gshd
ENSLAFG00000000098	CNOT1	100	99.201	ENSCGRG00000001714	Cnot1	100	99.201	Cricetulus_griseus_crigri
ENSLAFG00000000098	CNOT1	100	83.000	ENSCVAG00000018930	cnot1	100	82.833	Cyprinodon_variegatus
ENSLAFG00000000098	CNOT1	100	89.740	ENSDARG00000004174	cnot1	100	89.698	Danio_rerio
ENSLAFG00000000098	CNOT1	100	97.058	ENSDNOG00000013250	CNOT1	100	97.058	Dasypus_novemcinctus
ENSLAFG00000000098	CNOT1	99	46.154	FBgn0085436	Not1	99	48.322	Drosophila_melanogaster
ENSLAFG00000000098	CNOT1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
ENSLAFG00000000098	CNOT1	81	76.693	ENSEBUG00000011534	cnot1	95	76.693	Eptatretus_burgeri
ENSLAFG00000000098	CNOT1	100	95.807	ENSEASG00005005819	CNOT1	100	98.211	Equus_asinus_asinus
ENSLAFG00000000098	CNOT1	100	99.664	ENSECAG00000009889	CNOT1	100	99.673	Equus_caballus
ENSLAFG00000000098	CNOT1	90	99.373	ENSEEUG00000006015	CNOT1	90	99.373	Erinaceus_europaeus
ENSLAFG00000000098	CNOT1	100	89.661	ENSELUG00000014085	cnot1	100	89.343	Esox_lucius
ENSLAFG00000000098	CNOT1	100	99.455	ENSFCAG00000025155	CNOT1	100	99.455	Felis_catus
ENSLAFG00000000098	CNOT1	100	97.561	ENSFALG00000007285	CNOT1	100	97.561	Ficedula_albicollis
ENSLAFG00000000098	CNOT1	100	99.453	ENSFDAG00000013399	CNOT1	100	99.453	Fukomys_damarensis
ENSLAFG00000000098	CNOT1	100	90.180	ENSFHEG00000020574	cnot1	100	90.222	Fundulus_heteroclitus
ENSLAFG00000000098	CNOT1	91	89.320	ENSGMOG00000012864	cnot1	100	89.690	Gadus_morhua
ENSLAFG00000000098	CNOT1	100	97.603	ENSGALG00000002301	CNOT1	100	97.603	Gallus_gallus
ENSLAFG00000000098	CNOT1	100	89.052	ENSGAFG00000015005	cnot1	100	89.052	Gambusia_affinis
ENSLAFG00000000098	CNOT1	91	90.111	ENSGACG00000002606	cnot1	100	95.631	Gasterosteus_aculeatus
ENSLAFG00000000098	CNOT1	100	97.688	ENSGAGG00000022646	CNOT1	100	97.688	Gopherus_agassizii
ENSLAFG00000000098	CNOT1	100	99.495	ENSGGOG00000009547	CNOT1	100	99.495	Gorilla_gorilla
ENSLAFG00000000098	CNOT1	97	96.914	ENSHBUG00000001729	cnot1	100	96.914	Haplochromis_burtoni
ENSLAFG00000000098	CNOT1	100	99.369	ENSHGLG00000014322	CNOT1	100	99.369	Heterocephalus_glaber_female
ENSLAFG00000000098	CNOT1	100	89.307	ENSHCOG00000006501	cnot1	100	89.445	Hippocampus_comes
ENSLAFG00000000098	CNOT1	100	88.768	ENSIPUG00000011915	cnot1	100	89.229	Ictalurus_punctatus
ENSLAFG00000000098	CNOT1	100	99.453	ENSSTOG00000005490	CNOT1	100	99.453	Ictidomys_tridecemlineatus
ENSLAFG00000000098	CNOT1	100	98.865	ENSJJAG00000000633	Cnot1	100	98.865	Jaculus_jaculus
ENSLAFG00000000098	CNOT1	100	90.221	ENSKMAG00000006149	cnot1	100	89.975	Kryptolebias_marmoratus
ENSLAFG00000000098	CNOT1	95	95.825	ENSLBEG00000004740	cnot1	100	96.208	Labrus_bergylta
ENSLAFG00000000098	CNOT1	100	94.828	ENSLACG00000010869	CNOT1	100	94.828	Latimeria_chalumnae
ENSLAFG00000000098	CNOT1	100	92.875	ENSLOCG00000006324	cnot1	100	92.875	Lepisosteus_oculatus
ENSLAFG00000000098	CNOT1	100	99.327	ENSMFAG00000035888	CNOT1	100	99.327	Macaca_fascicularis
ENSLAFG00000000098	CNOT1	100	99.537	ENSMMUG00000014625	CNOT1	100	99.537	Macaca_mulatta
ENSLAFG00000000098	CNOT1	100	96.771	ENSMNEG00000031820	CNOT1	100	99.627	Macaca_nemestrina
ENSLAFG00000000098	CNOT1	100	98.150	ENSMLEG00000040933	CNOT1	100	98.150	Mandrillus_leucophaeus
ENSLAFG00000000098	CNOT1	100	89.057	ENSMAMG00000016524	cnot1	100	89.094	Mastacembelus_armatus
ENSLAFG00000000098	CNOT1	97	96.914	ENSMZEG00005016210	cnot1	100	96.914	Maylandia_zebra
ENSLAFG00000000098	CNOT1	100	97.351	ENSMGAG00000001908	CNOT1	100	97.351	Meleagris_gallopavo
ENSLAFG00000000098	CNOT1	100	99.453	ENSMICG00000007071	CNOT1	100	99.453	Microcebus_murinus
ENSLAFG00000000098	CNOT1	100	99.327	ENSMOCG00000017969	Cnot1	100	99.327	Microtus_ochrogaster
ENSLAFG00000000098	CNOT1	97	93.548	ENSMMOG00000019134	cnot1	100	93.548	Mola_mola
ENSLAFG00000000098	CNOT1	100	97.856	ENSMODG00000014199	CNOT1	100	97.856	Monodelphis_domestica
ENSLAFG00000000098	CNOT1	100	90.138	ENSMALG00000008645	cnot1	100	90.138	Monopterus_albus
ENSLAFG00000000098	CNOT1	95	99.556	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.556	Mus_caroli
ENSLAFG00000000098	CNOT1	100	99.285	ENSMUSG00000036550	Cnot1	100	99.285	Mus_musculus
ENSLAFG00000000098	CNOT1	100	99.243	MGP_PahariEiJ_G0023028	Cnot1	100	99.243	Mus_pahari
ENSLAFG00000000098	CNOT1	100	99.285	MGP_SPRETEiJ_G0032549	Cnot1	100	99.285	Mus_spretus
ENSLAFG00000000098	CNOT1	100	99.748	ENSMPUG00000004830	CNOT1	100	99.748	Mustela_putorius_furo
ENSLAFG00000000098	CNOT1	100	98.991	ENSMLUG00000003728	CNOT1	100	98.991	Myotis_lucifugus
ENSLAFG00000000098	CNOT1	100	99.495	ENSNGAG00000018628	Cnot1	100	99.495	Nannospalax_galili
ENSLAFG00000000098	CNOT1	94	96.914	ENSNBRG00000019358	cnot1	100	96.914	Neolamprologus_brichardi
ENSLAFG00000000098	CNOT1	100	99.453	ENSNLEG00000003566	CNOT1	100	99.453	Nomascus_leucogenys
ENSLAFG00000000098	CNOT1	87	98.658	ENSMEUG00000006145	CNOT1	87	98.658	Notamacropus_eugenii
ENSLAFG00000000098	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSLAFG00000000098	CNOT1	100	99.411	ENSODEG00000016337	CNOT1	100	99.411	Octodon_degus
ENSLAFG00000000098	CNOT1	100	90.418	ENSONIG00000007358	cnot1	100	90.013	Oreochromis_niloticus
ENSLAFG00000000098	CNOT1	91	97.956	ENSOANG00000012109	CNOT1	100	98.262	Ornithorhynchus_anatinus
ENSLAFG00000000098	CNOT1	100	99.579	ENSOCUG00000006911	CNOT1	100	99.579	Oryctolagus_cuniculus
ENSLAFG00000000098	CNOT1	100	90.448	ENSORLG00000013734	cnot1	100	90.277	Oryzias_latipes
ENSLAFG00000000098	CNOT1	100	88.754	ENSORLG00020017012	cnot1	100	88.433	Oryzias_latipes_hni
ENSLAFG00000000098	CNOT1	100	88.670	ENSORLG00015007091	cnot1	100	88.181	Oryzias_latipes_hsok
ENSLAFG00000000098	CNOT1	100	88.008	ENSOMEG00000015124	cnot1	100	88.297	Oryzias_melastigma
ENSLAFG00000000098	CNOT1	100	99.495	ENSOGAG00000000543	CNOT1	100	99.495	Otolemur_garnettii
ENSLAFG00000000098	CNOT1	100	99.622	ENSOARG00000001567	CNOT1	100	99.622	Ovis_aries
ENSLAFG00000000098	CNOT1	100	99.537	ENSPPAG00000022013	CNOT1	100	99.537	Pan_paniscus
ENSLAFG00000000098	CNOT1	100	99.748	ENSPPRG00000004867	CNOT1	100	99.748	Panthera_pardus
ENSLAFG00000000098	CNOT1	100	99.748	ENSPTIG00000012589	CNOT1	100	99.748	Panthera_tigris_altaica
ENSLAFG00000000098	CNOT1	100	99.245	ENSPTRG00000008183	CNOT1	100	99.245	Pan_troglodytes
ENSLAFG00000000098	CNOT1	100	96.022	ENSPANG00000020901	CNOT1	100	96.022	Papio_anubis
ENSLAFG00000000098	CNOT1	97	93.118	ENSPKIG00000002914	CNOT1	99	93.118	Paramormyrops_kingsleyae
ENSLAFG00000000098	CNOT1	100	91.992	ENSPKIG00000023538	CNOT1	100	92.159	Paramormyrops_kingsleyae
ENSLAFG00000000098	CNOT1	100	97.561	ENSPSIG00000005499	CNOT1	100	97.561	Pelodiscus_sinensis
ENSLAFG00000000098	CNOT1	100	81.056	ENSPMAG00000009381	cnot1	100	80.956	Petromyzon_marinus
ENSLAFG00000000098	CNOT1	100	96.749	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSLAFG00000000098	CNOT1	99	89.734	ENSPFOG00000003497	cnot1	100	89.734	Poecilia_formosa
ENSLAFG00000000098	CNOT1	95	95.427	ENSPLAG00000014018	cnot1	100	95.808	Poecilia_latipinna
ENSLAFG00000000098	CNOT1	95	95.427	ENSPMEG00000005868	cnot1	100	95.808	Poecilia_mexicana
ENSLAFG00000000098	CNOT1	95	95.427	ENSPREG00000018793	cnot1	100	95.808	Poecilia_reticulata
ENSLAFG00000000098	CNOT1	100	99.495	ENSPPYG00000007410	CNOT1	100	99.495	Pongo_abelii
ENSLAFG00000000098	CNOT1	90	97.871	ENSPCAG00000003241	CNOT1	90	97.871	Procavia_capensis
ENSLAFG00000000098	CNOT1	100	99.203	ENSPCOG00000027139	CNOT1	100	99.203	Propithecus_coquereli
ENSLAFG00000000098	CNOT1	100	97.014	ENSPVAG00000004243	CNOT1	100	97.014	Pteropus_vampyrus
ENSLAFG00000000098	CNOT1	97	96.914	ENSPNYG00000012919	cnot1	100	96.914	Pundamilia_nyererei
ENSLAFG00000000098	CNOT1	100	89.870	ENSPNAG00000000246	cnot1	100	89.912	Pygocentrus_nattereri
ENSLAFG00000000098	CNOT1	100	99.201	ENSRNOG00000012271	Cnot1	100	99.201	Rattus_norvegicus
ENSLAFG00000000098	CNOT1	100	97.275	ENSRBIG00000044598	CNOT1	100	97.275	Rhinopithecus_bieti
ENSLAFG00000000098	CNOT1	100	99.579	ENSRROG00000000906	CNOT1	100	99.579	Rhinopithecus_roxellana
ENSLAFG00000000098	CNOT1	56	31.863	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSLAFG00000000098	CNOT1	100	95.148	ENSSBOG00000029155	CNOT1	100	95.148	Saimiri_boliviensis_boliviensis
ENSLAFG00000000098	CNOT1	100	98.025	ENSSHAG00000012187	CNOT1	100	98.025	Sarcophilus_harrisii
ENSLAFG00000000098	CNOT1	100	90.490	ENSSFOG00015017614	cnot1	100	90.235	Scleropages_formosus
ENSLAFG00000000098	CNOT1	97	96.914	ENSSMAG00000013844	cnot1	100	96.914	Scophthalmus_maximus
ENSLAFG00000000098	CNOT1	97	96.774	ENSSDUG00000021491	cnot1	100	96.774	Seriola_dumerili
ENSLAFG00000000098	CNOT1	97	96.774	ENSSLDG00000014816	cnot1	100	96.774	Seriola_lalandi_dorsalis
ENSLAFG00000000098	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSLAFG00000000098	CNOT1	100	90.524	ENSSPAG00000018802	cnot1	100	90.273	Stegastes_partitus
ENSLAFG00000000098	CNOT1	100	99.495	ENSSSCG00000002799	CNOT1	100	99.495	Sus_scrofa
ENSLAFG00000000098	CNOT1	100	97.438	ENSTGUG00000005919	CNOT1	100	97.438	Taeniopygia_guttata
ENSLAFG00000000098	CNOT1	100	88.870	ENSTNIG00000018706	cnot1	100	88.676	Tetraodon_nigroviridis
ENSLAFG00000000098	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSLAFG00000000098	CNOT1	95	99.360	ENSTTRG00000008460	CNOT1	95	99.360	Tursiops_truncatus
ENSLAFG00000000098	CNOT1	100	99.748	ENSUAMG00000009251	CNOT1	100	99.748	Ursus_americanus
ENSLAFG00000000098	CNOT1	100	99.748	ENSUMAG00000021291	CNOT1	100	99.748	Ursus_maritimus
ENSLAFG00000000098	CNOT1	97	97.317	ENSVPAG00000008846	CNOT1	97	97.317	Vicugna_pacos
ENSLAFG00000000098	CNOT1	100	98.534	ENSVVUG00000024037	CNOT1	100	99.316	Vulpes_vulpes
ENSLAFG00000000098	CNOT1	100	90.059	ENSXETG00000015900	cnot1	100	89.849	Xenopus_tropicalis
ENSLAFG00000000098	CNOT1	100	89.220	ENSXCOG00000013552	cnot1	100	89.220	Xiphophorus_couchianus
ENSLAFG00000000098	CNOT1	100	89.262	ENSXMAG00000006031	cnot1	100	89.262	Xiphophorus_maculatus